RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 CCDC144AA2RUR9 1427 aa16.68■□□□□ 0.26
SEMA4D-213ENST00000455551 ARID4BQ4LE39 1312 aaPredicted RBP16.66■□□□□ 0.26
SEMA4D-213ENST00000455551 SHROOM2Q13796 1616 aa16.66■□□□□ 0.26
SEMA4D-213ENST00000455551 PLEKHH2Q8IVE3 1493 aa16.65■□□□□ 0.26
SEMA4D-213ENST00000455551 ABCC2Q92887 1545 aa16.65■□□□□ 0.26
SEMA4D-213ENST00000455551 NBPF1Q3BBV0 1214 aa16.64■□□□□ 0.26
SEMA4D-213ENST00000455551 TMC1Q8TDI8 760 aa16.64■□□□□ 0.25
SEMA4D-213ENST00000455551 MYT1Q01538 1121 aa16.63■□□□□ 0.25
SEMA4D-213ENST00000455551 MYO5CQ9NQX4 1742 aa16.63■□□□□ 0.25
SEMA4D-213ENST00000455551 PLA2R1Q13018 1463 aa16.62■□□□□ 0.25
SEMA4D-213ENST00000455551 PRAG1Q86YV5 1406 aa16.61■□□□□ 0.25
SEMA4D-213ENST00000455551 PPP4R2Q9NY27 417 aa16.61■□□□□ 0.25
SEMA4D-213ENST00000455551 B4GALNT3Q6L9W6 998 aa16.6■□□□□ 0.25
SEMA4D-213ENST00000455551 MAST1Q9Y2H9 1570 aa16.59■□□□□ 0.25
SEMA4D-213ENST00000455551 UNC13BO14795 1591 aa16.59■□□□□ 0.25
SEMA4D-213ENST00000455551 PNISRQ8TF01 805 aaKnown RBP16.59■□□□□ 0.25
SEMA4D-213ENST00000455551 A2MP01023 1474 aa16.58■□□□□ 0.25
SEMA4D-213ENST00000455551 EFCAB2Q5VUJ9 269 aa16.57■□□□□ 0.24
SEMA4D-213ENST00000455551 TRPM1Q7Z4N2 1603 aa16.56■□□□□ 0.24
SEMA4D-213ENST00000455551 ZCCHC11Q5TAX3 1644 aaKnown RBP16.56■□□□□ 0.24
SEMA4D-213ENST00000455551 ERICH6BQ5W0A0 696 aa16.56■□□□□ 0.24
SEMA4D-213ENST00000455551 PLCH2O75038 1416 aa16.56■□□□□ 0.24
SEMA4D-213ENST00000455551 PLXNC1O60486 1568 aa16.55■□□□□ 0.24
SEMA4D-213ENST00000455551 TRAPPC8Q9Y2L5 1435 aa16.55■□□□□ 0.24
SEMA4D-213ENST00000455551 DUOX2Q9NRD8 1548 aa16.55■□□□□ 0.24
SEMA4D-213ENST00000455551 NUDCQ9Y266 331 aa16.54■□□□□ 0.24
SEMA4D-213ENST00000455551 MYBBP1AQ9BQG0 1328 aaKnown RBP16.54■□□□□ 0.24
SEMA4D-213ENST00000455551 IQGAP3Q86VI3 1631 aa16.54■□□□□ 0.24
SEMA4D-213ENST00000455551 SMG6Q86US8 1419 aaKnown RBP16.54■□□□□ 0.24
SEMA4D-213ENST00000455551 AFAP1Q8N556 730 aa16.53■□□□□ 0.24
SEMA4D-213ENST00000455551 SALL2Q9Y467 1007 aaPredicted RBP16.53■□□□□ 0.24
SEMA4D-213ENST00000455551 RALBP1Q15311 655 aa16.52■□□□□ 0.24
SEMA4D-213ENST00000455551 ANP32EQ9BTT0 268 aa16.52■□□□□ 0.24
SEMA4D-213ENST00000455551 DISP3Q9P2K9 1392 aa16.51■□□□□ 0.23
SEMA4D-213ENST00000455551 ERBINQ96RT1 1412 aa16.51■□□□□ 0.23
SEMA4D-213ENST00000455551 SPAG9O60271 1321 aaKnown RBP16.5■□□□□ 0.23
SEMA4D-213ENST00000455551 E9PCH4 1651 aa16.5■□□□□ 0.23
SEMA4D-213ENST00000455551 BRD4O60885 1362 aaPredicted RBP16.5■□□□□ 0.23
SEMA4D-213ENST00000455551 CC2D1BQ5T0F9 858 aaKnown RBP16.5■□□□□ 0.23
SEMA4D-213ENST00000455551 ABCC1P33527 1531 aa16.5■□□□□ 0.23
SEMA4D-213ENST00000455551 KTN1Q86UP2 1357 aaKnown RBP16.49■□□□□ 0.23
SEMA4D-213ENST00000455551 GPRASP1Q5JY77 1395 aa16.49■□□□□ 0.23
SEMA4D-213ENST00000455551 TESK2Q96S53 571 aa16.49■□□□□ 0.23
SEMA4D-213ENST00000455551 MYT1LQ9UL68 1186 aa16.49■□□□□ 0.23
SEMA4D-213ENST00000455551 CLASP1Q7Z460 1538 aa16.49■□□□□ 0.23
SEMA4D-213ENST00000455551 MAGI2Q86UL8 1455 aa16.47■□□□□ 0.23
SEMA4D-213ENST00000455551 LRPPRCP42704 1394 aaKnown RBP16.47■□□□□ 0.23
SEMA4D-213ENST00000455551 COL17A1Q9UMD9 1497 aaPredicted RBP16.46■□□□□ 0.23
SEMA4D-213ENST00000455551 PRDM15P57071 1507 aaPredicted RBP16.46■□□□□ 0.23
SEMA4D-213ENST00000455551 NLRP13Q86W25 1043 aa16.46■□□□□ 0.23
SEMA4D-213ENST00000455551 PANK3Q9H999 370 aa16.46■□□□□ 0.23
SEMA4D-213ENST00000455551 UHRF1BP1LA0JNW5 1464 aa16.46■□□□□ 0.22
SEMA4D-213ENST00000455551 PER1O15534 1290 aaPredicted RBP16.46■□□□□ 0.22
SEMA4D-213ENST00000455551 PARD3Q8TEW0 1356 aa16.45■□□□□ 0.22
SEMA4D-213ENST00000455551 TMF1P82094 1093 aa16.44■□□□□ 0.22
SEMA4D-213ENST00000455551 ATP10AO60312 1499 aa16.43■□□□□ 0.22
SEMA4D-213ENST00000455551 EIF2AK4Q9P2K8 1649 aaKnown RBP16.43■□□□□ 0.22
SEMA4D-213ENST00000455551 MSH5O43196 834 aa16.42■□□□□ 0.22
SEMA4D-213ENST00000455551 CCDC136Q96JN2 1154 aa16.41■□□□□ 0.22
SEMA4D-213ENST00000455551 ZFYVE16Q7Z3T8 1539 aa16.41■□□□□ 0.22
SEMA4D-213ENST00000455551 RNF123Q5XPI4 1314 aa16.4■□□□□ 0.22
SEMA4D-213ENST00000455551 LAMC1P11047 1609 aa16.4■□□□□ 0.22
SEMA4D-213ENST00000455551 KIF3BO15066 747 aa16.39■□□□□ 0.22
SEMA4D-213ENST00000455551 FANCAO15360 1455 aa16.38■□□□□ 0.21
SEMA4D-213ENST00000455551 WDR7Q9Y4E6 1490 aa16.38■□□□□ 0.21
SEMA4D-213ENST00000455551 SCAPERQ9BY12 1400 aa16.37■□□□□ 0.21
SEMA4D-213ENST00000455551 RTEL1-TNFRSF6BF6WH68 1400 aa16.36■□□□□ 0.21
SEMA4D-213ENST00000455551 CDCA7LQ96GN5 454 aa16.36■□□□□ 0.21
SEMA4D-213ENST00000455551 RNF17Q9BXT8 1623 aaKnown RBP16.35■□□□□ 0.21
SEMA4D-213ENST00000455551 FANCIQ9NVI1 1328 aa16.35■□□□□ 0.21
SEMA4D-213ENST00000455551 MADDQ8WXG6 1647 aa16.35■□□□□ 0.21
SEMA4D-213ENST00000455551 TRPM2O94759 1503 aa16.35■□□□□ 0.21
SEMA4D-213ENST00000455551 CLTCL1P53675 1640 aa16.34■□□□□ 0.21
SEMA4D-213ENST00000455551 ATP7AQ04656 1500 aa16.34■□□□□ 0.21
SEMA4D-213ENST00000455551 KANK1Q14678 1352 aa16.34■□□□□ 0.21
SEMA4D-213ENST00000455551 RCAN3Q9UKA8 241 aa16.33■□□□□ 0.21
SEMA4D-213ENST00000455551 SPHKAPQ2M3C7 1700 aa16.33■□□□□ 0.21
SEMA4D-213ENST00000455551 ADGRL1O94910 1474 aa16.33■□□□□ 0.2
SEMA4D-213ENST00000455551 RRP1P56182 461 aaKnown RBP16.33■□□□□ 0.2
SEMA4D-213ENST00000455551 WASHC2CQ9Y4E1 1318 aa16.33■□□□□ 0.2
SEMA4D-213ENST00000455551 KNSTRNQ9Y448 316 aa16.32■□□□□ 0.2
SEMA4D-213ENST00000455551 ARAP3Q8WWN8 1544 aa16.32■□□□□ 0.2
SEMA4D-213ENST00000455551 PTPRTO14522 1441 aa16.31■□□□□ 0.2
SEMA4D-213ENST00000455551 CEP152O94986 1710 aa16.3■□□□□ 0.2
SEMA4D-213ENST00000455551 UGGT1Q9NYU2 1555 aa16.3■□□□□ 0.2
SEMA4D-213ENST00000455551 EXOC6Q8TAG9 804 aa16.3■□□□□ 0.2
SEMA4D-213ENST00000455551 ERICH6Q7L0X2 663 aa16.3■□□□□ 0.2
SEMA4D-213ENST00000455551 ABCA9Q8IUA7 1624 aa16.29■□□□□ 0.2
SEMA4D-213ENST00000455551 INO80Q9ULG1 1556 aaPredicted RBP16.29■□□□□ 0.2
SEMA4D-213ENST00000455551 TET3O43151 1660 aa16.29■□□□□ 0.2
SEMA4D-213ENST00000455551 SCAF11Q99590 1463 aaKnown RBP16.29■□□□□ 0.2
SEMA4D-213ENST00000455551 DEPDC5O75140 1603 aa16.29■□□□□ 0.2
SEMA4D-213ENST00000455551 ASXL2Q76L83 1435 aa16.29■□□□□ 0.2
SEMA4D-213ENST00000455551 IQGAP1P46940 1657 aa16.29■□□□□ 0.2
SEMA4D-213ENST00000455551 CFAP70Q5T0N1 1121 aa16.28■□□□□ 0.2
SEMA4D-213ENST00000455551 ADAMTS8Q9UP79 889 aa16.28■□□□□ 0.2
SEMA4D-213ENST00000455551 PDE3BQ13370 1112 aa16.27■□□□□ 0.2
SEMA4D-213ENST00000455551 PLIN1O60240 522 aa16.26■□□□□ 0.19
SEMA4D-213ENST00000455551 PPP2R1AP30153 589 aa16.26■□□□□ 0.19
SEMA4D-213ENST00000455551 CHGAP10645 457 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms