RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.88□□□□□ -0.35
CSGALNACT1-203ENST00000454498 NGDNQ8NEJ9 315 aaKnown RBP12.88□□□□□ -0.35
CSGALNACT1-203ENST00000454498 STAC3Q96MF2 364 aa12.88□□□□□ -0.35
CSGALNACT1-203ENST00000454498 HFM1A2PYH4 1435 aa12.87□□□□□ -0.35
CSGALNACT1-203ENST00000454498 CCDC7Q96M83 1385 aa12.87□□□□□ -0.35
CSGALNACT1-203ENST00000454498 IPO8O15397 1037 aaKnown RBP12.87□□□□□ -0.35
CSGALNACT1-203ENST00000454498 EVC2Q86UK5 1308 aa12.87□□□□□ -0.35
CSGALNACT1-203ENST00000454498 CALD1Q05682 793 aaKnown RBP12.86□□□□□ -0.35
CSGALNACT1-203ENST00000454498 MINK1Q8N4C8 1332 aaPredicted RBP12.86□□□□□ -0.35
CSGALNACT1-203ENST00000454498 CASC1Q6TDU7 716 aa12.86□□□□□ -0.35
CSGALNACT1-203ENST00000454498 C9orf84Q5VXU9 1444 aa12.85□□□□□ -0.35
CSGALNACT1-203ENST00000454498 EPRSP07814 1512 aaKnown RBP12.84□□□□□ -0.35
CSGALNACT1-203ENST00000454498 CGNL1Q0VF96 1302 aa12.84□□□□□ -0.35
CSGALNACT1-203ENST00000454498 URB2Q14146 1524 aaKnown RBP12.84□□□□□ -0.35
CSGALNACT1-203ENST00000454498 WASHC2AQ641Q2 1341 aa12.84□□□□□ -0.35
CSGALNACT1-203ENST00000454498 CDK13Q14004 1512 aaKnown RBP12.83□□□□□ -0.36
CSGALNACT1-203ENST00000454498 HECW1Q76N89 1606 aa12.83□□□□□ -0.36
CSGALNACT1-203ENST00000454498 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.83□□□□□ -0.36
CSGALNACT1-203ENST00000454498 OS9Q13438 667 aaPredicted RBP12.83□□□□□ -0.36
CSGALNACT1-203ENST00000454498 RBM19Q9Y4C8 960 aaKnown RBP12.83□□□□□ -0.36
CSGALNACT1-203ENST00000454498 CENPJQ9HC77 1338 aaPredicted RBP12.82□□□□□ -0.36
CSGALNACT1-203ENST00000454498 IQGAP2Q13576 1575 aa12.82□□□□□ -0.36
CSGALNACT1-203ENST00000454498 EIF5BO60841 1220 aaKnown RBP12.82□□□□□ -0.36
CSGALNACT1-203ENST00000454498 RRP7AQ9Y3A4 280 aaKnown RBP12.82□□□□□ -0.36
CSGALNACT1-203ENST00000454498 CLUAP1Q96AJ1 413 aa12.82□□□□□ -0.36
CSGALNACT1-203ENST00000454498 ZBED9Q6R2W3 1325 aa12.82□□□□□ -0.36
CSGALNACT1-203ENST00000454498 SMC4Q9NTJ3 1288 aa12.81□□□□□ -0.36
CSGALNACT1-203ENST00000454498 NBPF8Q3BBV2 869 aa12.81□□□□□ -0.36
CSGALNACT1-203ENST00000454498 AMPHP49418 695 aa12.8□□□□□ -0.36
CSGALNACT1-203ENST00000454498 ITPRIPQ8IWB1 547 aa12.8□□□□□ -0.36
CSGALNACT1-203ENST00000454498 NAIPQ13075 1403 aa12.8□□□□□ -0.36
CSGALNACT1-203ENST00000454498 SCAPERQ9BY12 1400 aa12.8□□□□□ -0.36
CSGALNACT1-203ENST00000454498 CFAP70Q5T0N1 1121 aa12.8□□□□□ -0.36
CSGALNACT1-203ENST00000454498 KIAA1107Q9UPP5 1409 aa12.8□□□□□ -0.36
CSGALNACT1-203ENST00000454498 CSB-PGBD3P0DP91 1061 aa12.8□□□□□ -0.36
CSGALNACT1-203ENST00000454498 DAPK1P53355 1430 aa12.79□□□□□ -0.36
CSGALNACT1-203ENST00000454498 GOLGA6L22H0YM25 854 aa12.79□□□□□ -0.36
CSGALNACT1-203ENST00000454498 TMEM132EQ6IEE7 984 aa12.79□□□□□ -0.36
CSGALNACT1-203ENST00000454498 NOP58Q9Y2X3 529 aaKnown RBP12.79□□□□□ -0.36
CSGALNACT1-203ENST00000454498 APAF1O14727 1248 aa12.79□□□□□ -0.36
CSGALNACT1-203ENST00000454498 NBPF1Q3BBV0 1214 aa12.79□□□□□ -0.36
CSGALNACT1-203ENST00000454498 PCF11O94913 1555 aaKnown RBP12.79□□□□□ -0.36
CSGALNACT1-203ENST00000454498 CUL7Q14999 1698 aa12.79□□□□□ -0.36
CSGALNACT1-203ENST00000454498 PLEKHH2Q8IVE3 1493 aa12.78□□□□□ -0.36
CSGALNACT1-203ENST00000454498 RWDD1Q9H446 243 aaPredicted RBP12.78□□□□□ -0.36
CSGALNACT1-203ENST00000454498 PLB1Q6P1J6 1458 aa12.78□□□□□ -0.36
CSGALNACT1-203ENST00000454498 SUPT6HQ7KZ85 1726 aaKnown RBP12.78□□□□□ -0.36
CSGALNACT1-203ENST00000454498 GRIN2AQ12879 1464 aa12.77□□□□□ -0.36
CSGALNACT1-203ENST00000454498 LTV1Q96GA3 475 aaPredicted RBP12.77□□□□□ -0.36
CSGALNACT1-203ENST00000454498 ZNF608Q9ULD9 1512 aaPredicted RBP12.77□□□□□ -0.36
CSGALNACT1-203ENST00000454498 CNTLNQ9NXG0 1405 aa12.77□□□□□ -0.36
CSGALNACT1-203ENST00000454498 APBB1O00213 710 aa12.77□□□□□ -0.36
CSGALNACT1-203ENST00000454498 COG3Q96JB2 828 aa12.77□□□□□ -0.37
CSGALNACT1-203ENST00000454498 BIVM-ERCC5R4GMW8 1640 aa12.77□□□□□ -0.37
CSGALNACT1-203ENST00000454498 TCERG1O14776 1098 aaKnown RBP12.76□□□□□ -0.37
CSGALNACT1-203ENST00000454498 LMOD3Q0VAK6 560 aa12.76□□□□□ -0.37
CSGALNACT1-203ENST00000454498 STK31Q9BXU1 1019 aa12.76□□□□□ -0.37
CSGALNACT1-203ENST00000454498 MAGI1Q96QZ7 1491 aaPredicted RBP12.75□□□□□ -0.37
CSGALNACT1-203ENST00000454498 RAPGEF3O95398 923 aa12.75□□□□□ -0.37
CSGALNACT1-203ENST00000454498 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
CSGALNACT1-203ENST00000454498 BCL2L13Q9BXK5 485 aa12.74□□□□□ -0.37
CSGALNACT1-203ENST00000454498 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.74□□□□□ -0.37
CSGALNACT1-203ENST00000454498 MAP3K1Q13233 1512 aa12.74□□□□□ -0.37
CSGALNACT1-203ENST00000454498 E9PSI1 815 aa12.73□□□□□ -0.37
CSGALNACT1-203ENST00000454498 PLIN1O60240 522 aa12.73□□□□□ -0.37
CSGALNACT1-203ENST00000454498 ARHGEF11O15085 1522 aa12.73□□□□□ -0.37
CSGALNACT1-203ENST00000454498 ROCK1Q13464 1354 aa12.73□□□□□ -0.37
CSGALNACT1-203ENST00000454498 ELL2O00472 640 aaPredicted RBP12.73□□□□□ -0.37
CSGALNACT1-203ENST00000454498 CHMP4AQ9BY43 222 aa12.73□□□□□ -0.37
CSGALNACT1-203ENST00000454498 KCNJ4P48050 445 aa12.72□□□□□ -0.37
CSGALNACT1-203ENST00000454498 PMFBP1Q8TBY8 1022 aa12.72□□□□□ -0.37
CSGALNACT1-203ENST00000454498 TSHZ2Q9NRE2 1034 aa12.72□□□□□ -0.37
CSGALNACT1-203ENST00000454498 HSP90AB1P08238 724 aaKnown RBP12.72□□□□□ -0.37
CSGALNACT1-203ENST00000454498 NPHP1O15259 732 aa12.7□□□□□ -0.38
CSGALNACT1-203ENST00000454498 DIAPH1O60610 1272 aaKnown RBP12.7□□□□□ -0.38
CSGALNACT1-203ENST00000454498 CABP2Q9NPB3 220 aa12.7□□□□□ -0.38
CSGALNACT1-203ENST00000454498 RRP1P56182 461 aaKnown RBP12.7□□□□□ -0.38
CSGALNACT1-203ENST00000454498 GGNBP2Q9H3C7 697 aa12.7□□□□□ -0.38
CSGALNACT1-203ENST00000454498 SLC4A10Q6U841 1118 aa12.7□□□□□ -0.38
CSGALNACT1-203ENST00000454498 NGEFQ8N5V2 710 aa12.7□□□□□ -0.38
CSGALNACT1-203ENST00000454498 EXOC6Q8TAG9 804 aa12.69□□□□□ -0.38
CSGALNACT1-203ENST00000454498 HSCBQ8IWL3 235 aa12.69□□□□□ -0.38
CSGALNACT1-203ENST00000454498 ABCC5O15440 1437 aa12.69□□□□□ -0.38
CSGALNACT1-203ENST00000454498 FGD1P98174 961 aa12.68□□□□□ -0.38
CSGALNACT1-203ENST00000454498 ZNF330Q9Y3S2 320 aaPredicted RBP12.68□□□□□ -0.38
CSGALNACT1-203ENST00000454498 SLC52A1Q9NWF4 448 aa12.67□□□□□ -0.38
CSGALNACT1-203ENST00000454498 WDR97A6NE52 1622 aa12.67□□□□□ -0.38
CSGALNACT1-203ENST00000454498 BRD4O60885 1362 aaPredicted RBP12.67□□□□□ -0.38
CSGALNACT1-203ENST00000454498 CCDC141Q6ZP82 1450 aa12.67□□□□□ -0.38
CSGALNACT1-203ENST00000454498 CFAP44Q96MT7 982 aa12.67□□□□□ -0.38
CSGALNACT1-203ENST00000454498 ADAMTS8Q9UP79 889 aa12.66□□□□□ -0.38
CSGALNACT1-203ENST00000454498 TPRNQ4KMQ1 711 aa12.66□□□□□ -0.38
CSGALNACT1-203ENST00000454498 MTHFSP49914 203 aa12.66□□□□□ -0.38
CSGALNACT1-203ENST00000454498 COG6Q9Y2V7 657 aa12.66□□□□□ -0.38
CSGALNACT1-203ENST00000454498 CAMSAP2Q08AD1 1489 aa12.65□□□□□ -0.38
CSGALNACT1-203ENST00000454498 HMMRO75330 724 aa12.65□□□□□ -0.38
CSGALNACT1-203ENST00000454498 ZKSCAN2Q63HK3 967 aa12.65□□□□□ -0.38
CSGALNACT1-203ENST00000454498 RUNDC1Q96C34 613 aa12.65□□□□□ -0.38
CSGALNACT1-203ENST00000454498 CRBNQ96SW2 442 aa12.65□□□□□ -0.38
CSGALNACT1-203ENST00000454498 SLC12A5Q9H2X9 1139 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms