RNA–Protein interactions for RNA: ENST00000452382.1

PMS1-218, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-218ENST00000452382 HRO43593 1189 aa10.05□□□□□ -0.8
PMS1-218ENST00000452382 FBXW7Q969H0 707 aa10.05□□□□□ -0.8
PMS1-218ENST00000452382 KCNV2Q8TDN2 545 aa10.04□□□□□ -0.8
PMS1-218ENST00000452382 EPAS1Q99814 870 aa10.03□□□□□ -0.8
PMS1-218ENST00000452382 VPS9D1Q9Y2B5 631 aa10.03□□□□□ -0.8
PMS1-218ENST00000452382 ZBED2Q9BTP6 218 aa10.02□□□□□ -0.81
PMS1-218ENST00000452382 COL9A1P20849 921 aa10.01□□□□□ -0.81
PMS1-218ENST00000452382 NBR1Q14596 966 aa10.01□□□□□ -0.81
PMS1-218ENST00000452382 RBM33Q96EV2 1170 aaKnown RBP10.01□□□□□ -0.81
PMS1-218ENST00000452382 PPP1R3GB7ZBB8 358 aa10□□□□□ -0.81
PMS1-218ENST00000452382 SLC4A5Q9BY07 1137 aa10□□□□□ -0.81
PMS1-218ENST00000452382 GRXCR2A6NFK2 248 aa9.98□□□□□ -0.81
PMS1-218ENST00000452382 PRIM1P49642 420 aaKnown RBP9.98□□□□□ -0.81
PMS1-218ENST00000452382 EN1Q05925 392 aaPredicted RBP9.98□□□□□ -0.81
PMS1-218ENST00000452382 C6orf132Q5T0Z8 1188 aa9.98□□□□□ -0.81
PMS1-218ENST00000452382 PROX2Q3B8N5 592 aa9.97□□□□□ -0.81
PMS1-218ENST00000452382 ARHGEF1Q92888 912 aaKnown RBP9.97□□□□□ -0.81
PMS1-218ENST00000452382 TSR1Q2NL82 804 aaKnown RBP9.96□□□□□ -0.82
PMS1-218ENST00000452382 BHMG1C9JSJ3 638 aaPredicted RBP9.95□□□□□ -0.82
PMS1-218ENST00000452382 MAP3K7O43318 606 aa9.95□□□□□ -0.82
PMS1-218ENST00000452382 OSBPP22059 807 aa9.93□□□□□ -0.82
PMS1-218ENST00000452382 P3H3Q8IVL6 736 aa9.92□□□□□ -0.82
PMS1-218ENST00000452382 STAC3Q96MF2 364 aa9.92□□□□□ -0.82
PMS1-218ENST00000452382 MLLT3P42568 568 aaPredicted RBP9.9□□□□□ -0.82
PMS1-218ENST00000452382 KCTD12Q96CX2 325 aaKnown RBP9.9□□□□□ -0.82
PMS1-218ENST00000452382 CDHR5Q9HBB8 845 aa9.9□□□□□ -0.82
PMS1-218ENST00000452382 NBPF3Q9H094 633 aa9.89□□□□□ -0.83
PMS1-218ENST00000452382 RABGEF1Q9UJ41 708 aa9.89□□□□□ -0.83
PMS1-218ENST00000452382 MRPL50Q8N5N7 158 aaKnown RBP9.88□□□□□ -0.83
PMS1-218ENST00000452382 TRIM6-TRIM34B2RNG4 842 aa9.87□□□□□ -0.83
PMS1-218ENST00000452382 KIAA1468Q9P260 1216 aa9.87□□□□□ -0.83
PMS1-218ENST00000452382 TSKSQ9UJT2 592 aa9.85□□□□□ -0.83
PMS1-218ENST00000452382 SEMA3EO15041 775 aa9.84□□□□□ -0.83
PMS1-218ENST00000452382 ONECUT3O60422 494 aaPredicted RBP9.84□□□□□ -0.83
PMS1-218ENST00000452382 HCSTQ9UBK5 93 aa9.84□□□□□ -0.83
PMS1-218ENST00000452382 SEPT9Q9UHD8 586 aaPredicted RBP9.84□□□□□ -0.83
PMS1-218ENST00000452382 GOLGA8CPA6NN73 597 aa9.83□□□□□ -0.84
PMS1-218ENST00000452382 WNT2BQ93097 391 aa9.83□□□□□ -0.84
PMS1-218ENST00000452382 FAM198AQ9UFP1 575 aa9.83□□□□□ -0.84
PMS1-218ENST00000452382 THSD4Q6ZMP0 1018 aa9.82□□□□□ -0.84
PMS1-218ENST00000452382 CDCA7LQ96GN5 454 aa9.82□□□□□ -0.84
PMS1-218ENST00000452382 PRSS12P56730 875 aa9.81□□□□□ -0.84
PMS1-218ENST00000452382 CERKQ8TCT0 537 aa9.81□□□□□ -0.84
PMS1-218ENST00000452382 PTPN5P54829 565 aa9.8□□□□□ -0.84
PMS1-218ENST00000452382 LAPTM4BQ86VI4 370 aa9.8□□□□□ -0.84
PMS1-218ENST00000452382 NPDC1Q9NQX5 325 aaPredicted RBP9.8□□□□□ -0.84
PMS1-218ENST00000452382 C3orf80F5H4A9 247 aa9.79□□□□□ -0.84
PMS1-218ENST00000452382 ZFRQ96KR1 1074 aaKnown RBP9.78□□□□□ -0.84
PMS1-218ENST00000452382 SMAPO00193 183 aa9.77□□□□□ -0.85
PMS1-218ENST00000452382 FAM98CQ17RN3 349 aaKnown RBP9.77□□□□□ -0.85
PMS1-218ENST00000452382 PACS2Q86VP3 889 aa9.77□□□□□ -0.85
PMS1-218ENST00000452382 ANKK1Q8NFD2 765 aa9.77□□□□□ -0.85
PMS1-218ENST00000452382 BCAMP50895 628 aa9.76□□□□□ -0.85
PMS1-218ENST00000452382 RBM27Q9P2N5 1060 aaKnown RBP9.76□□□□□ -0.85
PMS1-218ENST00000452382 TESPA1A2RU30 521 aaPredicted RBP9.75□□□□□ -0.85
PMS1-218ENST00000452382 PADI6Q6TGC4 694 aa9.75□□□□□ -0.85
PMS1-218ENST00000452382 BCANQ96GW7 911 aa9.75□□□□□ -0.85
PMS1-218ENST00000452382 SOWAHBA6NEL2 793 aa9.73□□□□□ -0.85
PMS1-218ENST00000452382 PTGDRQ13258 359 aa9.73□□□□□ -0.85
PMS1-218ENST00000452382 TTC13Q8NBP0 860 aa9.73□□□□□ -0.85
PMS1-218ENST00000452382 TATDN2Q93075 761 aa9.73□□□□□ -0.85
PMS1-218ENST00000452382 PNMA3Q9UL41 463 aa9.73□□□□□ -0.85
PMS1-218ENST00000452382 NBPF26B4DH59 902 aa9.72□□□□□ -0.85
PMS1-218ENST00000452382 NUTM2FA1L443 756 aa9.71□□□□□ -0.86
PMS1-218ENST00000452382 NUDT18Q6ZVK8 323 aa9.71□□□□□ -0.86
PMS1-218ENST00000452382 PLA2G2EQ9NZK7 142 aa9.71□□□□□ -0.86
PMS1-218ENST00000452382 RBM26Q5T8P6 1007 aaKnown RBP9.7□□□□□ -0.86
PMS1-218ENST00000452382 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.69□□□□□ -0.86
PMS1-218ENST00000452382 LRCH3Q96II8 777 aa9.68□□□□□ -0.86
PMS1-218ENST00000452382 WBP1LQ9NX94 342 aa9.68□□□□□ -0.86
PMS1-218ENST00000452382 SAMD7Q7Z3H4 446 aa9.67□□□□□ -0.86
PMS1-218ENST00000452382 HPS5Q9UPZ3 1129 aa9.66□□□□□ -0.86
PMS1-218ENST00000452382 FCHSD2O94868 740 aa9.65□□□□□ -0.86
PMS1-218ENST00000452382 SMYD5Q6GMV2 418 aa9.65□□□□□ -0.86
PMS1-218ENST00000452382 TSR3Q9UJK0 312 aaKnown RBP9.64□□□□□ -0.87
PMS1-218ENST00000452382 GPR37O15354 613 aa9.63□□□□□ -0.87
PMS1-218ENST00000452382 FAM161AQ3B820 660 aa9.63□□□□□ -0.87
PMS1-218ENST00000452382 EYA1Q99502 592 aa9.63□□□□□ -0.87
PMS1-218ENST00000452382 ADGRG1Q9Y653 693 aa9.62□□□□□ -0.87
PMS1-218ENST00000452382 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.61□□□□□ -0.87
PMS1-218ENST00000452382 SWT1Q5T5J6 900 aaKnown RBP9.6□□□□□ -0.87
PMS1-218ENST00000452382 NYAP1Q6ZVC0 841 aa9.6□□□□□ -0.87
PMS1-218ENST00000452382 RNF40O75150 1001 aa9.59□□□□□ -0.87
PMS1-218ENST00000452382 HIC1Q14526 733 aa9.59□□□□□ -0.87
PMS1-218ENST00000452382 FECHP22830 423 aa9.58□□□□□ -0.88
PMS1-218ENST00000452382 PPP4CP60510 307 aa9.58□□□□□ -0.88
PMS1-218ENST00000452382 RBM46Q8TBY0 533 aaKnown RBP9.57□□□□□ -0.88
PMS1-218ENST00000452382 GNPATO15228 680 aa9.56□□□□□ -0.88
PMS1-218ENST00000452382 ITGBL1O95965 494 aaPredicted RBP9.56□□□□□ -0.88
PMS1-218ENST00000452382 HDGFP51858 240 aaKnown RBP9.56□□□□□ -0.88
PMS1-218ENST00000452382 IFFO2Q5TF58 517 aa9.56□□□□□ -0.88
PMS1-218ENST00000452382 GPIHBP1Q8IV16 184 aa9.56□□□□□ -0.88
PMS1-218ENST00000452382 DNAJB2P25686 324 aa9.55□□□□□ -0.88
PMS1-218ENST00000452382 LMOD2Q6P5Q4 547 aa9.55□□□□□ -0.88
PMS1-218ENST00000452382 RCCD1A6NED2 376 aa9.54□□□□□ -0.88
PMS1-218ENST00000452382 APLP1P51693 650 aa9.53□□□□□ -0.88
PMS1-218ENST00000452382 SLF2Q8IX21 1173 aa9.53□□□□□ -0.88
PMS1-218ENST00000452382 PXYLP1Q8TE99 480 aa9.53□□□□□ -0.88
PMS1-218ENST00000452382 TMEM134Q9H6X4 195 aa9.53□□□□□ -0.88
PMS1-218ENST00000452382 METTL3Q86U44 580 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms