RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 FANCAO15360 1455 aa9.75□□□□□ -0.85
USP46-202ENST00000451218 KIF15Q9NS87 1388 aa9.74□□□□□ -0.85
USP46-202ENST00000451218 HNRNPMP52272 730 aaKnown RBP eCLIP9.74□□□□□ -0.851e-7■■■□□ 14.8
USP46-202ENST00000451218 CLTCL1P53675 1640 aa9.74□□□□□ -0.85
USP46-202ENST00000451218 ANKRD30AQ9BXX3 1397 aa9.73□□□□□ -0.85
USP46-202ENST00000451218 LAMC1P11047 1609 aa9.73□□□□□ -0.85
USP46-202ENST00000451218 NEURL4Q96JN8 1562 aa9.73□□□□□ -0.85
USP46-202ENST00000451218 TIMELESSQ9UNS1 1208 aa9.73□□□□□ -0.85
USP46-202ENST00000451218 UHRF1BP1Q6BDS2 1440 aa9.73□□□□□ -0.85
USP46-202ENST00000451218 HECW2Q9P2P5 1572 aa9.72□□□□□ -0.85
USP46-202ENST00000451218 DIP2CQ9Y2E4 1556 aa9.72□□□□□ -0.85
USP46-202ENST00000451218 LMTK2Q8IWU2 1503 aa9.71□□□□□ -0.86
USP46-202ENST00000451218 OSCARQ8IYS5 282 aa9.71□□□□□ -0.86
USP46-202ENST00000451218 TRPM2O94759 1503 aa9.7□□□□□ -0.86
USP46-202ENST00000451218 PIK3C2BO00750 1634 aa9.7□□□□□ -0.86
USP46-202ENST00000451218 MADDQ8WXG6 1647 aa9.7□□□□□ -0.86
USP46-202ENST00000451218 ZMYM4Q5VZL5 1548 aa9.7□□□□□ -0.86
USP46-202ENST00000451218 POGZQ7Z3K3 1410 aa9.7□□□□□ -0.86
USP46-202ENST00000451218 PPP4R3CPQ6ZMV5 832 aa9.69□□□□□ -0.86
USP46-202ENST00000451218 IQGAP1P46940 1657 aa9.69□□□□□ -0.86
USP46-202ENST00000451218 EFCAB6Q5THR3 1501 aa9.68□□□□□ -0.86
USP46-202ENST00000451218 PTPRTO14522 1441 aa9.68□□□□□ -0.86
USP46-202ENST00000451218 ADGRL1O94910 1474 aa9.68□□□□□ -0.86
USP46-202ENST00000451218 NBPF8Q3BBV2 869 aa9.68□□□□□ -0.86
USP46-202ENST00000451218 DIEXFQ68CQ4 756 aaKnown RBP9.68□□□□□ -0.86
USP46-202ENST00000451218 MLH3Q9UHC1 1453 aa9.67□□□□□ -0.86
USP46-202ENST00000451218 ZNF518AQ6AHZ1 1483 aa9.67□□□□□ -0.86
USP46-202ENST00000451218 A2MP01023 1474 aa9.67□□□□□ -0.86
USP46-202ENST00000451218 CAMSAP1Q5T5Y3 1602 aa9.66□□□□□ -0.86
USP46-202ENST00000451218 RALGAPBQ86X10 1494 aa9.66□□□□□ -0.86
USP46-202ENST00000451218 NEO1Q92859 1461 aa9.65□□□□□ -0.86
USP46-202ENST00000451218 PPLO60437 1756 aa9.65□□□□□ -0.87
USP46-202ENST00000451218 REREQ9P2R6 1566 aa9.65□□□□□ -0.87
USP46-202ENST00000451218 ZNF777Q9ULD5 760 aaPredicted RBP9.65□□□□□ -0.87
USP46-202ENST00000451218 SYNMO15061 1565 aa9.64□□□□□ -0.87
USP46-202ENST00000451218 UGGT1Q9NYU2 1555 aa9.64□□□□□ -0.87
USP46-202ENST00000451218 KIAA1210Q9ULL0 1709 aa9.64□□□□□ -0.87
USP46-202ENST00000451218 ZC3H13Q5T200 1668 aaKnown RBP9.64□□□□□ -0.87
USP46-202ENST00000451218 MYO5BQ9ULV0 1848 aa9.64□□□□□ -0.87
USP46-202ENST00000451218 MIER1Q8N108 512 aa9.63□□□□□ -0.87
USP46-202ENST00000451218 L3MBTL2Q969R5 705 aa9.63□□□□□ -0.87
USP46-202ENST00000451218 RSPH4AQ5TD94 716 aa9.63□□□□□ -0.87
USP46-202ENST00000451218 NEUROD1Q13562 356 aa9.63□□□□□ -0.87
USP46-202ENST00000451218 MYOM1P52179 1685 aa9.63□□□□□ -0.87
USP46-202ENST00000451218 TSPOAP1O95153 1857 aa9.62□□□□□ -0.87
USP46-202ENST00000451218 SCAPERQ9BY12 1400 aa9.62□□□□□ -0.87
USP46-202ENST00000451218 C11orf95C9JLR9 678 aaPredicted RBP9.62□□□□□ -0.87
USP46-202ENST00000451218 NRXN1Q9ULB1 1477 aa9.62□□□□□ -0.87
USP46-202ENST00000451218 AFAP1Q8N556 730 aa9.61□□□□□ -0.87
USP46-202ENST00000451218 NUP155O75694 1391 aa9.61□□□□□ -0.87
USP46-202ENST00000451218 ADGRB3O60242 1522 aa9.61□□□□□ -0.87
USP46-202ENST00000451218 CD109Q6YHK3 1445 aa9.61□□□□□ -0.87
USP46-202ENST00000451218 ABCC3O15438 1527 aa9.61□□□□□ -0.87
USP46-202ENST00000451218 PRAG1Q86YV5 1406 aa9.61□□□□□ -0.87
USP46-202ENST00000451218 KCNH8Q96L42 1107 aa9.6□□□□□ -0.87
USP46-202ENST00000451218 KIF1BO60333 1816 aa9.6□□□□□ -0.87
USP46-202ENST00000451218 MYO3AQ8NEV4 1616 aa9.6□□□□□ -0.87
USP46-202ENST00000451218 COL17A1Q9UMD9 1497 aaPredicted RBP9.6□□□□□ -0.87
USP46-202ENST00000451218 SETD1AO15047 1707 aaKnown RBP9.59□□□□□ -0.87
USP46-202ENST00000451218 PKD2Q13563 968 aa9.59□□□□□ -0.87
USP46-202ENST00000451218 TONSLQ96HA7 1378 aa9.59□□□□□ -0.87
USP46-202ENST00000451218 ACIN1Q9UKV3 1341 aaKnown RBP9.59□□□□□ -0.87
USP46-202ENST00000451218 DHX29Q7Z478 1369 aaKnown RBP9.59□□□□□ -0.87
USP46-202ENST00000451218 PREX1Q8TCU6 1659 aa9.59□□□□□ -0.87
USP46-202ENST00000451218 WASHC2AQ641Q2 1341 aa9.58□□□□□ -0.88
USP46-202ENST00000451218 GPRASP1Q5JY77 1395 aa9.58□□□□□ -0.88
USP46-202ENST00000451218 EFCAB2Q5VUJ9 269 aa9.58□□□□□ -0.88
USP46-202ENST00000451218 YEATS2Q9ULM3 1422 aa9.57□□□□□ -0.88
USP46-202ENST00000451218 HIRIP3Q9BW71 556 aaPredicted RBP9.55□□□□□ -0.88
USP46-202ENST00000451218 ARHGEF40Q8TER5 1519 aa9.54□□□□□ -0.88
USP46-202ENST00000451218 TRIM52Q96A61 297 aa9.54□□□□□ -0.88
USP46-202ENST00000451218 NPATQ14207 1427 aa9.54□□□□□ -0.88
USP46-202ENST00000451218 TMEM131LA2VDJ0 1609 aa9.54□□□□□ -0.88
USP46-202ENST00000451218 ADGRB1O14514 1584 aa9.53□□□□□ -0.88
USP46-202ENST00000451218 NOS1P29475 1434 aa9.53□□□□□ -0.88
USP46-202ENST00000451218 TSPY4P0CV99 314 aa9.53□□□□□ -0.88
USP46-202ENST00000451218 TSPY10P0CW01 314 aa9.53□□□□□ -0.88
USP46-202ENST00000451218 MYOM2P54296 1465 aa9.53□□□□□ -0.88
USP46-202ENST00000451218 NEXMIFQ5QGS0 1516 aa9.53□□□□□ -0.88
USP46-202ENST00000451218 CFAP65Q6ZU64 1925 aaKnown RBP9.52□□□□□ -0.88
USP46-202ENST00000451218 AGLP35573 1532 aa9.52□□□□□ -0.88
USP46-202ENST00000451218 HSPA5P11021 654 aaKnown RBP9.52□□□□□ -0.89
USP46-202ENST00000451218 SPAG9O60271 1321 aaKnown RBP9.52□□□□□ -0.89
USP46-202ENST00000451218 SLC24A1O60721 1099 aa9.52□□□□□ -0.89
USP46-202ENST00000451218 ASXL1Q8IXJ9 1541 aa9.51□□□□□ -0.89
USP46-202ENST00000451218 CLTCQ00610 1675 aaKnown RBP9.51□□□□□ -0.89
USP46-202ENST00000451218 ARHGEF28Q8N1W1 1705 aaKnown RBP9.51□□□□□ -0.89
USP46-202ENST00000451218 CCDC7Q96M83 1385 aa9.5□□□□□ -0.89
USP46-202ENST00000451218 SETBP1Q9Y6X0 1596 aa9.5□□□□□ -0.89
USP46-202ENST00000451218 NRXN3Q9Y4C0 1643 aa9.5□□□□□ -0.89
USP46-202ENST00000451218 ARHGAP31Q2M1Z3 1444 aa9.5□□□□□ -0.89
USP46-202ENST00000451218 CNTLNQ9NXG0 1405 aa9.49□□□□□ -0.89
USP46-202ENST00000451218 CCDC144AA2RUR9 1427 aa9.49□□□□□ -0.89
USP46-202ENST00000451218 SPATA31D1Q6ZQQ2 1576 aa9.48□□□□□ -0.89
USP46-202ENST00000451218 KIF7Q2M1P5 1343 aa9.47□□□□□ -0.89
USP46-202ENST00000451218 USP47Q96K76 1375 aa9.47□□□□□ -0.89
USP46-202ENST00000451218 SCAF1Q9H7N4 1312 aaKnown RBP9.47□□□□□ -0.89
USP46-202ENST00000451218 KDM5AP29375 1690 aaKnown RBP9.46□□□□□ -0.9
USP46-202ENST00000451218 PIK3C2GO75747 1445 aa9.45□□□□□ -0.9
USP46-202ENST00000451218 RAPGEF3O95398 923 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 868.2 ms