RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 ROCK2O75116 1388 aaKnown RBP13.29□□□□□ -0.28
PRDM15-208ENST00000449395 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.29□□□□□ -0.28
PRDM15-208ENST00000449395 IPO8O15397 1037 aaKnown RBP13.29□□□□□ -0.28
PRDM15-208ENST00000449395 CTDP1Q9Y5B0 961 aaPredicted RBP13.29□□□□□ -0.28
PRDM15-208ENST00000449395 MRC2Q9UBG0 1479 aa13.29□□□□□ -0.28
PRDM15-208ENST00000449395 TRIM34Q9BYJ4 488 aa13.28□□□□□ -0.28
PRDM15-208ENST00000449395 NESP48681 1621 aa13.28□□□□□ -0.28
PRDM15-208ENST00000449395 NGEFQ8N5V2 710 aa13.28□□□□□ -0.28
PRDM15-208ENST00000449395 MPHOSPH9Q99550 1183 aa13.28□□□□□ -0.28
PRDM15-208ENST00000449395 BCL11BQ9C0K0 894 aaPredicted RBP13.28□□□□□ -0.28
PRDM15-208ENST00000449395 RBM19Q9Y4C8 960 aaKnown RBP13.28□□□□□ -0.28
PRDM15-208ENST00000449395 C1orf141Q5JVX7 400 aa13.27□□□□□ -0.28
PRDM15-208ENST00000449395 L1TD1Q5T7N2 865 aaKnown RBP13.27□□□□□ -0.28
PRDM15-208ENST00000449395 RCAN3Q9UKA8 241 aa13.27□□□□□ -0.28
PRDM15-208ENST00000449395 PPP6R1Q9UPN7 881 aa13.27□□□□□ -0.28
PRDM15-208ENST00000449395 NLRP2Q9NX02 1062 aa13.27□□□□□ -0.29
PRDM15-208ENST00000449395 ABCC8Q09428 1581 aa13.27□□□□□ -0.29
PRDM15-208ENST00000449395 RAB3GAP2Q9H2M9 1393 aa13.27□□□□□ -0.29
PRDM15-208ENST00000449395 RAD21O60216 631 aa13.27□□□□□ -0.29
PRDM15-208ENST00000449395 RALBP1Q15311 655 aa13.27□□□□□ -0.29
PRDM15-208ENST00000449395 APBB1O00213 710 aa13.26□□□□□ -0.29
PRDM15-208ENST00000449395 C8orf37Q96NL8 207 aa13.26□□□□□ -0.29
PRDM15-208ENST00000449395 U2AF1L5P0DN76 240 aaPredicted RBP13.26□□□□□ -0.29
PRDM15-208ENST00000449395 U2AF1Q01081 240 aaKnown RBP eCLIP13.26□□□□□ -0.29
PRDM15-208ENST00000449395 SAMD1Q6SPF0 538 aaPredicted RBP13.25□□□□□ -0.29
PRDM15-208ENST00000449395 PRG4Q92954 1404 aaPredicted RBP13.25□□□□□ -0.29
PRDM15-208ENST00000449395 CCDC88BA6NC98 1476 aa13.25□□□□□ -0.29
PRDM15-208ENST00000449395 CEBPAP49715 358 aaPredicted RBP13.25□□□□□ -0.29
PRDM15-208ENST00000449395 LMTK3Q96Q04 1460 aa13.25□□□□□ -0.29
PRDM15-208ENST00000449395 NUP155O75694 1391 aa13.25□□□□□ -0.29
PRDM15-208ENST00000449395 MSNP26038 577 aaKnown RBP13.25□□□□□ -0.29
PRDM15-208ENST00000449395 CALD1Q05682 793 aaKnown RBP13.25□□□□□ -0.29
PRDM15-208ENST00000449395 CHAF1AQ13111 956 aaPredicted RBP13.24□□□□□ -0.29
PRDM15-208ENST00000449395 WASHC2AQ641Q2 1341 aa13.24□□□□□ -0.29
PRDM15-208ENST00000449395 XPCQ01831 940 aaPredicted RBP13.24□□□□□ -0.29
PRDM15-208ENST00000449395 ITPRIPQ8IWB1 547 aa13.24□□□□□ -0.29
PRDM15-208ENST00000449395 TRAK1Q9UPV9 953 aa13.24□□□□□ -0.29
PRDM15-208ENST00000449395 KIAA1211Q6ZU35 1233 aa13.23□□□□□ -0.29
PRDM15-208ENST00000449395 DEKP35659 375 aaKnown RBP13.23□□□□□ -0.29
PRDM15-208ENST00000449395 RWDD1Q9H446 243 aaPredicted RBP13.23□□□□□ -0.29
PRDM15-208ENST00000449395 DRC7Q8IY82 874 aa13.23□□□□□ -0.29
PRDM15-208ENST00000449395 FMN1Q68DA7 1419 aa13.22□□□□□ -0.29
PRDM15-208ENST00000449395 DNAJC5Q9H3Z4 198 aa13.22□□□□□ -0.29
PRDM15-208ENST00000449395 ANKRD30AQ9BXX3 1397 aa13.22□□□□□ -0.29
PRDM15-208ENST00000449395 ATAD2BQ9ULI0 1458 aa13.22□□□□□ -0.29
PRDM15-208ENST00000449395 GORABQ5T7V8 394 aa13.22□□□□□ -0.29
PRDM15-208ENST00000449395 TTC5Q8N0Z6 440 aa13.22□□□□□ -0.29
PRDM15-208ENST00000449395 CNKSR2Q8WXI2 1034 aa13.22□□□□□ -0.29
PRDM15-208ENST00000449395 TOM1L2Q6ZVM7 507 aa13.21□□□□□ -0.29
PRDM15-208ENST00000449395 RBM33Q96EV2 1170 aaKnown RBP13.21□□□□□ -0.29
PRDM15-208ENST00000449395 PRDM2Q13029 1718 aa13.21□□□□□ -0.3
PRDM15-208ENST00000449395 FAM177BA6PVY3 158 aa13.2□□□□□ -0.3
PRDM15-208ENST00000449395 MINK1Q8N4C8 1332 aaPredicted RBP13.2□□□□□ -0.3
PRDM15-208ENST00000449395 NBPF8Q3BBV2 869 aa13.2□□□□□ -0.3
PRDM15-208ENST00000449395 NBPF14Q5TI25 921 aa13.2□□□□□ -0.3
PRDM15-208ENST00000449395 WWC3Q9ULE0 1092 aa13.2□□□□□ -0.3
PRDM15-208ENST00000449395 GNL2Q13823 731 aaKnown RBP13.2□□□□□ -0.3
PRDM15-208ENST00000449395 AMER1Q5JTC6 1135 aaPredicted RBP13.2□□□□□ -0.3
PRDM15-208ENST00000449395 TCERG1O14776 1098 aaKnown RBP13.2□□□□□ -0.3
PRDM15-208ENST00000449395 EIF3AQ14152 1382 aaKnown RBP13.19□□□□□ -0.3
PRDM15-208ENST00000449395 SLC26A8Q96RN1 970 aa13.19□□□□□ -0.3
PRDM15-208ENST00000449395 MROH2BQ7Z745 1585 aa13.19□□□□□ -0.3
PRDM15-208ENST00000449395 GBP4Q96PP9 640 aa13.19□□□□□ -0.3
PRDM15-208ENST00000449395 RBM42Q9BTD8 480 aaKnown RBP13.19□□□□□ -0.3
PRDM15-208ENST00000449395 GAPVD1Q14C86 1478 aa13.19□□□□□ -0.3
PRDM15-208ENST00000449395 PMFBP1Q8TBY8 1022 aa13.18□□□□□ -0.3
PRDM15-208ENST00000449395 DDX54Q8TDD1 881 aaKnown RBP13.18□□□□□ -0.3
PRDM15-208ENST00000449395 RAD54L2Q9Y4B4 1467 aa13.18□□□□□ -0.3
PRDM15-208ENST00000449395 GPRASP1Q5JY77 1395 aa13.17□□□□□ -0.3
PRDM15-208ENST00000449395 PTMSP20962 102 aa13.17□□□□□ -0.3
PRDM15-208ENST00000449395 CLEC11AQ9Y240 323 aa13.17□□□□□ -0.3
PRDM15-208ENST00000449395 RAPGEF4Q8WZA2 1011 aa13.17□□□□□ -0.3
PRDM15-208ENST00000449395 PRDM11Q9NQV5 511 aa13.16□□□□□ -0.3
PRDM15-208ENST00000449395 SLKQ9H2G2 1235 aaPredicted RBP13.16□□□□□ -0.3
PRDM15-208ENST00000449395 SMC4Q9NTJ3 1288 aa13.16□□□□□ -0.3
PRDM15-208ENST00000449395 VGFO15240 615 aaPredicted RBP13.15□□□□□ -0.3
PRDM15-208ENST00000449395 VPS53Q5VIR6 699 aa13.15□□□□□ -0.3
PRDM15-208ENST00000449395 L3MBTL2Q969R5 705 aa13.15□□□□□ -0.3
PRDM15-208ENST00000449395 TTLL12Q14166 644 aaPredicted RBP13.15□□□□□ -0.3
PRDM15-208ENST00000449395 STK31Q9BXU1 1019 aa13.15□□□□□ -0.3
PRDM15-208ENST00000449395 TERF2IPQ9NYB0 399 aa13.15□□□□□ -0.3
PRDM15-208ENST00000449395 GZF1Q9H116 711 aaPredicted RBP13.14□□□□□ -0.31
PRDM15-208ENST00000449395 CCDC146Q8IYE0 955 aa13.14□□□□□ -0.31
PRDM15-208ENST00000449395 MFAP1P55081 439 aaKnown RBP13.14□□□□□ -0.31
PRDM15-208ENST00000449395 CHMP4AQ9BY43 222 aa13.13□□□□□ -0.31
PRDM15-208ENST00000449395 ZNF219Q9P2Y4 722 aaPredicted RBP13.13□□□□□ -0.31
PRDM15-208ENST00000449395 BEGAINQ9BUH8 593 aa13.13□□□□□ -0.31
PRDM15-208ENST00000449395 PRM3Q9NNZ6 103 aa13.12□□□□□ -0.31
PRDM15-208ENST00000449395 NLRP13Q86W25 1043 aa13.11□□□□□ -0.31
PRDM15-208ENST00000449395 ABTB2Q8N961 1025 aa13.11□□□□□ -0.31
PRDM15-208ENST00000449395 VPS37DQ86XT2 251 aa13.11□□□□□ -0.31
PRDM15-208ENST00000449395 HTATSF1O43719 755 aaKnown RBP13.11□□□□□ -0.31
PRDM15-208ENST00000449395 POLD1P28340 1107 aa13.11□□□□□ -0.31
PRDM15-208ENST00000449395 GPATCH3Q96I76 525 aa13.11□□□□□ -0.31
PRDM15-208ENST00000449395 TRIM6-TRIM34B2RNG4 842 aa13.11□□□□□ -0.31
PRDM15-208ENST00000449395 AFAP1Q8N556 730 aa13.11□□□□□ -0.31
PRDM15-208ENST00000449395 HMMRO75330 724 aa13.1□□□□□ -0.31
PRDM15-208ENST00000449395 RSPH4AQ5TD94 716 aa13.1□□□□□ -0.31
PRDM15-208ENST00000449395 CLUAP1Q96AJ1 413 aa13.1□□□□□ -0.31
PRDM15-208ENST00000449395 NOL10Q9BSC4 688 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms