RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 GTF2E1P29083 439 aaPredicted RBP12.79□□□□□ -0.36
SCN10A-201ENST00000449082 KIF15Q9NS87 1388 aa12.79□□□□□ -0.36
SCN10A-201ENST00000449082 PDE3BQ13370 1112 aa12.78□□□□□ -0.36
SCN10A-201ENST00000449082 CENPJQ9HC77 1338 aaPredicted RBP12.78□□□□□ -0.36
SCN10A-201ENST00000449082 TRIM6-TRIM34B2RNG4 842 aa12.78□□□□□ -0.36
SCN10A-201ENST00000449082 PTMSP20962 102 aa12.78□□□□□ -0.36
SCN10A-201ENST00000449082 EVA1CP58658 441 aa12.78□□□□□ -0.36
SCN10A-201ENST00000449082 DRC7Q8IY82 874 aa12.78□□□□□ -0.36
SCN10A-201ENST00000449082 C1orf141Q5JVX7 400 aa12.77□□□□□ -0.37
SCN10A-201ENST00000449082 GAPVD1Q14C86 1478 aa12.76□□□□□ -0.37
SCN10A-201ENST00000449082 CGNL1Q0VF96 1302 aa12.76□□□□□ -0.37
SCN10A-201ENST00000449082 CHAF1AQ13111 956 aaPredicted RBP12.76□□□□□ -0.37
SCN10A-201ENST00000449082 GBP4Q96PP9 640 aa12.76□□□□□ -0.37
SCN10A-201ENST00000449082 TCERG1O14776 1098 aaKnown RBP12.75□□□□□ -0.37
SCN10A-201ENST00000449082 L1TD1Q5T7N2 865 aaKnown RBP12.75□□□□□ -0.37
SCN10A-201ENST00000449082 ST20-MTHFSA0A0A6YYL1 179 aa12.75□□□□□ -0.37
SCN10A-201ENST00000449082 PANK3Q9H999 370 aa12.75□□□□□ -0.37
SCN10A-201ENST00000449082 FRAT2O75474 233 aaPredicted RBP12.74□□□□□ -0.37
SCN10A-201ENST00000449082 NAP1L5Q96NT1 182 aaPredicted RBP12.74□□□□□ -0.37
SCN10A-201ENST00000449082 MYBBP1AQ9BQG0 1328 aaKnown RBP12.74□□□□□ -0.37
SCN10A-201ENST00000449082 HSP90B1P14625 803 aaKnown RBP12.74□□□□□ -0.37
SCN10A-201ENST00000449082 CLUAP1Q96AJ1 413 aa12.74□□□□□ -0.37
SCN10A-201ENST00000449082 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.73□□□□□ -0.37
SCN10A-201ENST00000449082 FAM69CQ0P6D2 419 aa12.73□□□□□ -0.37
SCN10A-201ENST00000449082 CCDC34Q96HJ3 373 aa12.72□□□□□ -0.37
SCN10A-201ENST00000449082 MINK1Q8N4C8 1332 aaPredicted RBP12.72□□□□□ -0.37
SCN10A-201ENST00000449082 FGD5Q6ZNL6 1462 aa12.72□□□□□ -0.37
SCN10A-201ENST00000449082 MSNP26038 577 aaKnown RBP12.72□□□□□ -0.37
SCN10A-201ENST00000449082 MFAP1P55081 439 aaKnown RBP12.71□□□□□ -0.37
SCN10A-201ENST00000449082 KIAA2012Q0VF49 1180 aa12.71□□□□□ -0.37
SCN10A-201ENST00000449082 TEFQ10587 303 aa12.71□□□□□ -0.38
SCN10A-201ENST00000449082 SYAP1Q96A49 352 aaPredicted RBP12.7□□□□□ -0.38
SCN10A-201ENST00000449082 RRP7AQ9Y3A4 280 aaKnown RBP12.7□□□□□ -0.38
SCN10A-201ENST00000449082 MYOM3Q5VTT5 1437 aa12.7□□□□□ -0.38
SCN10A-201ENST00000449082 TTC5Q8N0Z6 440 aa12.69□□□□□ -0.38
SCN10A-201ENST00000449082 PSME1Q06323 249 aa12.69□□□□□ -0.38
SCN10A-201ENST00000449082 TPM4P67936 248 aa12.68□□□□□ -0.38
SCN10A-201ENST00000449082 TOMM22Q9NS69 142 aa12.68□□□□□ -0.38
SCN10A-201ENST00000449082 CSPP1Q1MSJ5 1256 aa12.68□□□□□ -0.38
SCN10A-201ENST00000449082 RUSC2Q8N2Y8 1516 aa12.68□□□□□ -0.38
SCN10A-201ENST00000449082 USP47Q96K76 1375 aa12.67□□□□□ -0.38
SCN10A-201ENST00000449082 NCBP3Q53F19 620 aaKnown RBP12.67□□□□□ -0.38
SCN10A-201ENST00000449082 AEBP2Q6ZN18 517 aaPredicted RBP12.67□□□□□ -0.38
SCN10A-201ENST00000449082 RAD54L2Q9Y4B4 1467 aa12.67□□□□□ -0.38
SCN10A-201ENST00000449082 NEXNQ0ZGT2 675 aa12.66□□□□□ -0.38
SCN10A-201ENST00000449082 MEX3CQ5U5Q3 659 aaKnown RBP12.66□□□□□ -0.38
SCN10A-201ENST00000449082 KIF3AQ9Y496 699 aa12.66□□□□□ -0.38
SCN10A-201ENST00000449082 E9PSI1 815 aa12.66□□□□□ -0.38
SCN10A-201ENST00000449082 IGF1RP08069 1367 aa12.66□□□□□ -0.38
SCN10A-201ENST00000449082 RASSF8Q8NHQ8 419 aa12.66□□□□□ -0.38
SCN10A-201ENST00000449082 MSH5O43196 834 aa12.65□□□□□ -0.38
SCN10A-201ENST00000449082 STAC3Q96MF2 364 aa12.65□□□□□ -0.38
SCN10A-201ENST00000449082 PRDM2Q13029 1718 aa12.65□□□□□ -0.38
SCN10A-201ENST00000449082 ELL2O00472 640 aaPredicted RBP12.65□□□□□ -0.38
SCN10A-201ENST00000449082 SLKQ9H2G2 1235 aaPredicted RBP12.65□□□□□ -0.38
SCN10A-201ENST00000449082 DIAPH1O60610 1272 aaKnown RBP12.65□□□□□ -0.38
SCN10A-201ENST00000449082 CUX1P39880 1505 aa12.65□□□□□ -0.38
SCN10A-201ENST00000449082 DHX57Q6P158 1386 aaKnown RBP12.65□□□□□ -0.39
SCN10A-201ENST00000449082 ST18O60284 1047 aa12.64□□□□□ -0.39
SCN10A-201ENST00000449082 RBM19Q9Y4C8 960 aaKnown RBP12.64□□□□□ -0.39
SCN10A-201ENST00000449082 KIF16BQ96L93 1317 aa12.64□□□□□ -0.39
SCN10A-201ENST00000449082 ZKSCAN2Q63HK3 967 aa12.64□□□□□ -0.39
SCN10A-201ENST00000449082 ATF3P18847 181 aa12.64□□□□□ -0.39
SCN10A-201ENST00000449082 LRRFIP1Q32MZ4 808 aaKnown RBP12.63□□□□□ -0.39
SCN10A-201ENST00000449082 CHMP4CQ96CF2 233 aa12.63□□□□□ -0.39
SCN10A-201ENST00000449082 MARCH6O60337 910 aa12.62□□□□□ -0.39
SCN10A-201ENST00000449082 EIF2S2P20042 333 aaKnown RBP12.62□□□□□ -0.39
SCN10A-201ENST00000449082 NOL8Q76FK4 1167 aaKnown RBP12.62□□□□□ -0.39
SCN10A-201ENST00000449082 C9orf78Q9NZ63 289 aaPredicted RBP12.62□□□□□ -0.39
SCN10A-201ENST00000449082 NGEFQ8N5V2 710 aa12.61□□□□□ -0.39
SCN10A-201ENST00000449082 AQRO60306 1485 aaKnown RBP eCLIP12.61□□□□□ -0.39
SCN10A-201ENST00000449082 DDX58O95786 925 aaKnown RBP12.61□□□□□ -0.39
SCN10A-201ENST00000449082 RILPL2Q969X0 211 aa12.61□□□□□ -0.39
SCN10A-201ENST00000449082 NOL10Q9BSC4 688 aaKnown RBP12.61□□□□□ -0.39
SCN10A-201ENST00000449082 SYTL4Q96C24 671 aaPredicted RBP12.6□□□□□ -0.39
SCN10A-201ENST00000449082 ANKRD45Q5TZF3 282 aa12.6□□□□□ -0.39
SCN10A-201ENST00000449082 VPS53Q5VIR6 699 aa12.6□□□□□ -0.39
SCN10A-201ENST00000449082 AMOTL1Q8IY63 956 aa12.6□□□□□ -0.39
SCN10A-201ENST00000449082 RTN4Q9NQC3 1192 aaKnown RBP12.6□□□□□ -0.39
SCN10A-201ENST00000449082 BCL2L13Q9BXK5 485 aa12.6□□□□□ -0.39
SCN10A-201ENST00000449082 PRKRIP1Q9H875 184 aaPredicted RBP12.59□□□□□ -0.39
SCN10A-201ENST00000449082 GZF1Q9H116 711 aaPredicted RBP12.59□□□□□ -0.39
SCN10A-201ENST00000449082 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
SCN10A-201ENST00000449082 CENPQQ7L2Z9 268 aaPredicted RBP12.59□□□□□ -0.39
SCN10A-201ENST00000449082 MIA2Q96PC5 1412 aa12.59□□□□□ -0.39
SCN10A-201ENST00000449082 SF3A1Q15459 793 aaKnown RBP12.59□□□□□ -0.39
SCN10A-201ENST00000449082 FGD6Q6ZV73 1430 aa12.58□□□□□ -0.4
SCN10A-201ENST00000449082 RIPK4P57078 832 aa12.58□□□□□ -0.4
SCN10A-201ENST00000449082 AKAP17AQ02040 695 aaKnown RBP12.58□□□□□ -0.4
SCN10A-201ENST00000449082 GRIN2BQ13224 1484 aa12.58□□□□□ -0.4
SCN10A-201ENST00000449082 RAPGEF4Q8WZA2 1011 aa12.58□□□□□ -0.4
SCN10A-201ENST00000449082 APAF1O14727 1248 aa12.58□□□□□ -0.4
SCN10A-201ENST00000449082 API5Q9BZZ5 524 aaKnown RBP12.58□□□□□ -0.4
SCN10A-201ENST00000449082 SYNE3Q6ZMZ3 975 aa12.57□□□□□ -0.4
SCN10A-201ENST00000449082 TRIM34Q9BYJ4 488 aa12.57□□□□□ -0.4
SCN10A-201ENST00000449082 ARHGAP5Q13017 1502 aa12.57□□□□□ -0.4
SCN10A-201ENST00000449082 H3BQV1 296 aa12.57□□□□□ -0.4
SCN10A-201ENST00000449082 IFFO2Q5TF58 517 aa12.57□□□□□ -0.4
SCN10A-201ENST00000449082 RUFY2Q8WXA3 655 aa12.57□□□□□ -0.4
SCN10A-201ENST00000449082 DIAPH3Q9NSV4 1193 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms