RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 BRPF3Q9ULD4 1205 aa14.31□□□□□ -0.12
ZNF550-204ENST00000447310 RRP7AQ9Y3A4 280 aaKnown RBP14.31□□□□□ -0.12
ZNF550-204ENST00000447310 POLA1P09884 1462 aaPredicted RBP14.31□□□□□ -0.12
ZNF550-204ENST00000447310 SKAP1Q86WV1 359 aa14.3□□□□□ -0.12
ZNF550-204ENST00000447310 EHBP1L1Q8N3D4 1523 aa14.3□□□□□ -0.12
ZNF550-204ENST00000447310 NPM1P06748 294 aaKnown RBP eCLIP14.3□□□□□ -0.12
ZNF550-204ENST00000447310 U2AF1L5P0DN76 240 aaPredicted RBP14.3□□□□□ -0.12
ZNF550-204ENST00000447310 MFAP1P55081 439 aaKnown RBP14.3□□□□□ -0.12
ZNF550-204ENST00000447310 U2AF1Q01081 240 aaKnown RBP eCLIP14.3□□□□□ -0.12
ZNF550-204ENST00000447310 PMFBP1Q8TBY8 1022 aa14.3□□□□□ -0.12
ZNF550-204ENST00000447310 ANKRD30BQ9BXX2 1392 aa14.3□□□□□ -0.12
ZNF550-204ENST00000447310 NBPF1Q3BBV0 1214 aa14.29□□□□□ -0.12
ZNF550-204ENST00000447310 MIA2Q96PC5 1412 aa14.29□□□□□ -0.12
ZNF550-204ENST00000447310 SAFB2Q14151 953 aaKnown RBP eCLIP14.28□□□□□ -0.12
ZNF550-204ENST00000447310 PNNQ9H307 717 aaKnown RBP14.28□□□□□ -0.12
ZNF550-204ENST00000447310 RSPH4AQ5TD94 716 aa14.27□□□□□ -0.12
ZNF550-204ENST00000447310 GOLGA6L3A6NEY3 463 aa14.27□□□□□ -0.12
ZNF550-204ENST00000447310 AQRO60306 1485 aaKnown RBP eCLIP14.27□□□□□ -0.13
ZNF550-204ENST00000447310 E9PSI1 815 aa14.27□□□□□ -0.13
ZNF550-204ENST00000447310 ITPRIPQ8IWB1 547 aa14.26□□□□□ -0.13
ZNF550-204ENST00000447310 NESP48681 1621 aa14.26□□□□□ -0.13
ZNF550-204ENST00000447310 PTPN23Q9H3S7 1636 aa14.26□□□□□ -0.13
ZNF550-204ENST00000447310 KIAA1107Q9UPP5 1409 aa14.26□□□□□ -0.13
ZNF550-204ENST00000447310 TOPBP1Q92547 1522 aa14.26□□□□□ -0.13
ZNF550-204ENST00000447310 FRAT2O75474 233 aaPredicted RBP14.26□□□□□ -0.13
ZNF550-204ENST00000447310 ERCC6Q03468 1493 aa14.25□□□□□ -0.13
ZNF550-204ENST00000447310 UNC13AQ9UPW8 1703 aa14.25□□□□□ -0.13
ZNF550-204ENST00000447310 CGNL1Q0VF96 1302 aa14.25□□□□□ -0.13
ZNF550-204ENST00000447310 SUPT6HQ7KZ85 1726 aaKnown RBP14.25□□□□□ -0.13
ZNF550-204ENST00000447310 DAPK1P53355 1430 aa14.24□□□□□ -0.13
ZNF550-204ENST00000447310 EFCAB2Q5VUJ9 269 aa14.23□□□□□ -0.13
ZNF550-204ENST00000447310 SMC4Q9NTJ3 1288 aa14.23□□□□□ -0.13
ZNF550-204ENST00000447310 KANK1Q14678 1352 aa14.23□□□□□ -0.13
ZNF550-204ENST00000447310 CDK13Q14004 1512 aaKnown RBP14.21□□□□□ -0.13
ZNF550-204ENST00000447310 SRPK2P78362 688 aaKnown RBP14.21□□□□□ -0.13
ZNF550-204ENST00000447310 TPRNQ4KMQ1 711 aa14.21□□□□□ -0.13
ZNF550-204ENST00000447310 PANK1Q8TE04 598 aa14.21□□□□□ -0.13
ZNF550-204ENST00000447310 POGKQ9P215 609 aa14.21□□□□□ -0.13
ZNF550-204ENST00000447310 KIF3BO15066 747 aa14.2□□□□□ -0.14
ZNF550-204ENST00000447310 EIF3AQ14152 1382 aaKnown RBP14.2□□□□□ -0.14
ZNF550-204ENST00000447310 PRDM2Q13029 1718 aa14.2□□□□□ -0.14
ZNF550-204ENST00000447310 PTMAP06454 111 aaKnown RBP14.2□□□□□ -0.14
ZNF550-204ENST00000447310 ABCA10Q8WWZ4 1543 aa14.19□□□□□ -0.14
ZNF550-204ENST00000447310 RPRD2Q5VT52 1461 aaKnown RBP14.19□□□□□ -0.14
ZNF550-204ENST00000447310 EPRSP07814 1512 aaKnown RBP14.19□□□□□ -0.14
ZNF550-204ENST00000447310 PPP2R1AP30153 589 aa14.19□□□□□ -0.14
ZNF550-204ENST00000447310 C20orf194Q5TEA3 1177 aa14.19□□□□□ -0.14
ZNF550-204ENST00000447310 RSPH6AQ9H0K4 717 aa14.19□□□□□ -0.14
ZNF550-204ENST00000447310 PRG4Q92954 1404 aaPredicted RBP14.19□□□□□ -0.14
ZNF550-204ENST00000447310 GBP4Q96PP9 640 aa14.19□□□□□ -0.14
ZNF550-204ENST00000447310 FOXD4L1Q9NU39 408 aa14.19□□□□□ -0.14
ZNF550-204ENST00000447310 IPO8O15397 1037 aaKnown RBP14.19□□□□□ -0.14
ZNF550-204ENST00000447310 TRAK1Q9UPV9 953 aa14.18□□□□□ -0.14
ZNF550-204ENST00000447310 BCAR3O75815 825 aa14.18□□□□□ -0.14
ZNF550-204ENST00000447310 STK26Q9P289 416 aa14.18□□□□□ -0.14
ZNF550-204ENST00000447310 ROCK1Q13464 1354 aa14.18□□□□□ -0.14
ZNF550-204ENST00000447310 GGT6Q6P531 493 aa14.17□□□□□ -0.14
ZNF550-204ENST00000447310 CASC1Q6TDU7 716 aa14.17□□□□□ -0.14
ZNF550-204ENST00000447310 CHMP4BQ9H444 224 aaKnown RBP14.17□□□□□ -0.14
ZNF550-204ENST00000447310 WASHC2CQ9Y4E1 1318 aa14.17□□□□□ -0.14
ZNF550-204ENST00000447310 ABCC5O15440 1437 aa14.16□□□□□ -0.14
ZNF550-204ENST00000447310 SPAG9O60271 1321 aaKnown RBP14.16□□□□□ -0.14
ZNF550-204ENST00000447310 DNTTIP2Q5QJE6 756 aaKnown RBP14.16□□□□□ -0.14
ZNF550-204ENST00000447310 ESF1Q9H501 851 aaKnown RBP14.15□□□□□ -0.14
ZNF550-204ENST00000447310 APBB1O00213 710 aa14.15□□□□□ -0.14
ZNF550-204ENST00000447310 MSNP26038 577 aaKnown RBP14.15□□□□□ -0.14
ZNF550-204ENST00000447310 DNMBPQ6XZF7 1577 aa14.14□□□□□ -0.15
ZNF550-204ENST00000447310 ZKSCAN2Q63HK3 967 aa14.14□□□□□ -0.15
ZNF550-204ENST00000447310 HECW1Q76N89 1606 aa14.13□□□□□ -0.15
ZNF550-204ENST00000447310 NUTM2DQ5VT03 806 aaPredicted RBP14.13□□□□□ -0.15
ZNF550-204ENST00000447310 TROQ12816 1431 aaPredicted RBP14.11□□□□□ -0.15
ZNF550-204ENST00000447310 C9orf84Q5VXU9 1444 aa14.11□□□□□ -0.15
ZNF550-204ENST00000447310 PTPRGP23470 1445 aa14.11□□□□□ -0.15
ZNF550-204ENST00000447310 NGEFQ8N5V2 710 aa14.11□□□□□ -0.15
ZNF550-204ENST00000447310 PLCB2Q00722 1185 aa14.1□□□□□ -0.15
ZNF550-204ENST00000447310 CHMP5Q9NZZ3 219 aa14.09□□□□□ -0.15
ZNF550-204ENST00000447310 DDX11L8A8MPP1 907 aa14.09□□□□□ -0.15
ZNF550-204ENST00000447310 DZIP1LQ8IYY4 767 aaKnown RBP14.09□□□□□ -0.15
ZNF550-204ENST00000447310 PLEKHG5O94827 1062 aa14.08□□□□□ -0.16
ZNF550-204ENST00000447310 GRIN2BQ13224 1484 aa14.08□□□□□ -0.16
ZNF550-204ENST00000447310 RUNDC1Q96C34 613 aa14.08□□□□□ -0.16
ZNF550-204ENST00000447310 C22orf23Q9BZE7 217 aa14.08□□□□□ -0.16
ZNF550-204ENST00000447310 ELL2O00472 640 aaPredicted RBP14.07□□□□□ -0.16
ZNF550-204ENST00000447310 PDE3AQ14432 1141 aa14.07□□□□□ -0.16
ZNF550-204ENST00000447310 HSP90AA2PQ14568 343 aaPredicted RBP14.07□□□□□ -0.16
ZNF550-204ENST00000447310 TCP11L2Q8N4U5 519 aa14.07□□□□□ -0.16
ZNF550-204ENST00000447310 ANKRD45Q5TZF3 282 aa14.07□□□□□ -0.16
ZNF550-204ENST00000447310 PDZRN3Q9UPQ7 1066 aa14.07□□□□□ -0.16
ZNF550-204ENST00000447310 ZBTB7CA1YPR0 619 aa14.06□□□□□ -0.16
ZNF550-204ENST00000447310 CUL7Q14999 1698 aa14.06□□□□□ -0.16
ZNF550-204ENST00000447310 ERBINQ96RT1 1412 aa14.06□□□□□ -0.16
ZNF550-204ENST00000447310 SLFN5Q08AF3 891 aa14.06□□□□□ -0.16
ZNF550-204ENST00000447310 PRKCSHP14314 528 aaPredicted RBP14.05□□□□□ -0.16
ZNF550-204ENST00000447310 PTMSP20962 102 aa14.05□□□□□ -0.16
ZNF550-204ENST00000447310 CFAP70Q5T0N1 1121 aa14.05□□□□□ -0.16
ZNF550-204ENST00000447310 CALD1Q05682 793 aaKnown RBP14.05□□□□□ -0.16
ZNF550-204ENST00000447310 HDGFL2Q7Z4V5 671 aaPredicted RBP14.04□□□□□ -0.16
ZNF550-204ENST00000447310 ARID3AQ99856 593 aa14.04□□□□□ -0.16
ZNF550-204ENST00000447310 DHX29Q7Z478 1369 aaKnown RBP14.04□□□□□ -0.16
ZNF550-204ENST00000447310 LNPKQ9C0E8 428 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms