RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 HTATSF1O43719 755 aaKnown RBP9.73□□□□□ -0.85
SMG1-202ENST00000446231 GOLGA6L1Q8N7Z2 621 aa9.73□□□□□ -0.85
SMG1-202ENST00000446231 ST20-MTHFSA0A0A6YYL1 179 aa9.73□□□□□ -0.85
SMG1-202ENST00000446231 ZSCAN30Q86W11 494 aa9.73□□□□□ -0.85
SMG1-202ENST00000446231 WASHC2CQ9Y4E1 1318 aa9.73□□□□□ -0.85
SMG1-202ENST00000446231 CDCA7LQ96GN5 454 aa9.72□□□□□ -0.85
SMG1-202ENST00000446231 GPS2Q13227 327 aa9.72□□□□□ -0.85
SMG1-202ENST00000446231 CLUAP1Q96AJ1 413 aa9.72□□□□□ -0.85
SMG1-202ENST00000446231 PRDM10Q9NQV6 1147 aa9.72□□□□□ -0.85
SMG1-202ENST00000446231 APBB1O00213 710 aa9.72□□□□□ -0.85
SMG1-202ENST00000446231 ZHX1Q9UKY1 873 aaPredicted RBP9.72□□□□□ -0.85
SMG1-202ENST00000446231 KCNJ4P48050 445 aa9.72□□□□□ -0.85
SMG1-202ENST00000446231 DIAPH3Q9NSV4 1193 aa9.72□□□□□ -0.85
SMG1-202ENST00000446231 FGD1P98174 961 aa9.72□□□□□ -0.85
SMG1-202ENST00000446231 ZNF592Q92610 1267 aa9.71□□□□□ -0.85
SMG1-202ENST00000446231 ABCC9O60706 1549 aa9.71□□□□□ -0.85
SMG1-202ENST00000446231 U2SURPO15042 1029 aaKnown RBP9.71□□□□□ -0.85
SMG1-202ENST00000446231 ZKSCAN2Q63HK3 967 aa9.71□□□□□ -0.85
SMG1-202ENST00000446231 U2AF1L5P0DN76 240 aaPredicted RBP9.71□□□□□ -0.86
SMG1-202ENST00000446231 XRCC6P12956 609 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMG1-202ENST00000446231 U2AF1Q01081 240 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMG1-202ENST00000446231 CAVIN1Q6NZI2 390 aaKnown RBP9.71□□□□□ -0.86
SMG1-202ENST00000446231 ARHGAP35Q9NRY4 1499 aa9.7□□□□□ -0.86
SMG1-202ENST00000446231 CCDC66A2RUB6 948 aa9.7□□□□□ -0.86
SMG1-202ENST00000446231 TPM3P06753 285 aa9.7□□□□□ -0.86
SMG1-202ENST00000446231 MCTP1Q6DN14 999 aa9.7□□□□□ -0.86
SMG1-202ENST00000446231 RNF214Q8ND24 703 aa9.7□□□□□ -0.86
SMG1-202ENST00000446231 PANK1Q8TE04 598 aa9.7□□□□□ -0.86
SMG1-202ENST00000446231 SMC4Q9NTJ3 1288 aa9.7□□□□□ -0.86
SMG1-202ENST00000446231 AKNAQ7Z591 1439 aa9.7□□□□□ -0.86
SMG1-202ENST00000446231 CIZ1Q9ULV3 898 aaPredicted RBP9.7□□□□□ -0.86
SMG1-202ENST00000446231 CCDC184Q52MB2 194 aa9.7□□□□□ -0.86
SMG1-202ENST00000446231 TSPY26PQ9H489 355 aa9.69□□□□□ -0.86
SMG1-202ENST00000446231 CLCN1P35523 988 aa9.69□□□□□ -0.86
SMG1-202ENST00000446231 APPP05067 770 aa9.69□□□□□ -0.86
SMG1-202ENST00000446231 BRD4O60885 1362 aaPredicted RBP9.69□□□□□ -0.86
SMG1-202ENST00000446231 CARMIL1Q5VZK9 1371 aa9.68□□□□□ -0.86
SMG1-202ENST00000446231 RRP7AQ9Y3A4 280 aaKnown RBP9.68□□□□□ -0.86
SMG1-202ENST00000446231 PLEKHD1A6NEE1 506 aa9.68□□□□□ -0.86
SMG1-202ENST00000446231 NOM1Q5C9Z4 860 aaKnown RBP9.68□□□□□ -0.86
SMG1-202ENST00000446231 ANKRD45Q5TZF3 282 aa9.67□□□□□ -0.86
SMG1-202ENST00000446231 NGEFQ8N5V2 710 aa9.67□□□□□ -0.86
SMG1-202ENST00000446231 SASS6Q6UVJ0 657 aa9.67□□□□□ -0.86
SMG1-202ENST00000446231 USP47Q96K76 1375 aa9.67□□□□□ -0.86
SMG1-202ENST00000446231 CNTLNQ9NXG0 1405 aa9.67□□□□□ -0.86
SMG1-202ENST00000446231 FMN1Q68DA7 1419 aa9.67□□□□□ -0.86
SMG1-202ENST00000446231 IFT57Q9NWB7 429 aa9.66□□□□□ -0.86
SMG1-202ENST00000446231 KIF3AQ9Y496 699 aa9.66□□□□□ -0.86
SMG1-202ENST00000446231 OS9Q13438 667 aaPredicted RBP9.66□□□□□ -0.86
SMG1-202ENST00000446231 BBXQ8WY36 941 aaPredicted RBP9.66□□□□□ -0.86
SMG1-202ENST00000446231 PLEKHG5O94827 1062 aa9.66□□□□□ -0.86
SMG1-202ENST00000446231 SETQ01105 290 aaPredicted RBP9.66□□□□□ -0.86
SMG1-202ENST00000446231 DYNC1I1O14576 645 aa9.66□□□□□ -0.86
SMG1-202ENST00000446231 MCM5P33992 734 aa9.66□□□□□ -0.86
SMG1-202ENST00000446231 RABEP1Q15276 862 aa9.66□□□□□ -0.86
SMG1-202ENST00000446231 MAPK8IP2Q13387 824 aaPredicted RBP9.66□□□□□ -0.86
SMG1-202ENST00000446231 CWC15Q9P013 229 aaKnown RBP9.66□□□□□ -0.86
SMG1-202ENST00000446231 REC8O95072 547 aa9.66□□□□□ -0.86
SMG1-202ENST00000446231 RRAGDQ9NQL2 400 aaPredicted RBP9.65□□□□□ -0.86
SMG1-202ENST00000446231 MBD3O95983 291 aa9.65□□□□□ -0.86
SMG1-202ENST00000446231 PRPF40AO75400 957 aaKnown RBP9.65□□□□□ -0.86
SMG1-202ENST00000446231 NOL8Q76FK4 1167 aaKnown RBP9.65□□□□□ -0.86
SMG1-202ENST00000446231 CCAR2Q8N163 923 aaKnown RBP9.65□□□□□ -0.86
SMG1-202ENST00000446231 APAF1O14727 1248 aa9.65□□□□□ -0.86
SMG1-202ENST00000446231 TPM4P67936 248 aa9.65□□□□□ -0.86
SMG1-202ENST00000446231 MPNDQ8N594 471 aa9.65□□□□□ -0.86
SMG1-202ENST00000446231 ATP6V1DQ9Y5K8 247 aa9.65□□□□□ -0.86
SMG1-202ENST00000446231 CECR2Q9BXF3 1484 aa9.65□□□□□ -0.87
SMG1-202ENST00000446231 ADAMTS8Q9UP79 889 aa9.65□□□□□ -0.87
SMG1-202ENST00000446231 XPCQ01831 940 aaPredicted RBP9.64□□□□□ -0.87
SMG1-202ENST00000446231 FOXD4L6Q3SYB3 417 aaPredicted RBP9.64□□□□□ -0.87
SMG1-202ENST00000446231 FOXD4L3Q6VB84 417 aaPredicted RBP9.64□□□□□ -0.87
SMG1-202ENST00000446231 RAPGEF2Q9Y4G8 1499 aa9.64□□□□□ -0.87
SMG1-202ENST00000446231 ABCC8Q09428 1581 aa9.64□□□□□ -0.87
SMG1-202ENST00000446231 BCL2L13Q9BXK5 485 aa9.63□□□□□ -0.87
SMG1-202ENST00000446231 PDE3AQ14432 1141 aa9.63□□□□□ -0.87
SMG1-202ENST00000446231 NAP1L2Q9ULW6 460 aaPredicted RBP9.63□□□□□ -0.87
SMG1-202ENST00000446231 PPP4R3BQ5MIZ7 849 aa9.63□□□□□ -0.87
SMG1-202ENST00000446231 OFD1O75665 1012 aa9.63□□□□□ -0.87
SMG1-202ENST00000446231 PDZRN3Q9UPQ7 1066 aa9.63□□□□□ -0.87
SMG1-202ENST00000446231 DZIP1LQ8IYY4 767 aaKnown RBP9.63□□□□□ -0.87
SMG1-202ENST00000446231 TBC1D2Q9BYX2 928 aa9.62□□□□□ -0.87
SMG1-202ENST00000446231 CWC22Q9HCG8 908 aaKnown RBP9.62□□□□□ -0.87
SMG1-202ENST00000446231 SKAP1Q86WV1 359 aa9.62□□□□□ -0.87
SMG1-202ENST00000446231 GTPBP4Q9BZE4 634 aaKnown RBP9.62□□□□□ -0.87
SMG1-202ENST00000446231 PDCL2Q8N4E4 241 aa9.61□□□□□ -0.87
SMG1-202ENST00000446231 HMMRO75330 724 aa9.61□□□□□ -0.87
SMG1-202ENST00000446231 CBX1P83916 185 aa9.61□□□□□ -0.87
SMG1-202ENST00000446231 STAG3Q9UJ98 1225 aa9.61□□□□□ -0.87
SMG1-202ENST00000446231 LETM1O95202 739 aaPredicted RBP9.61□□□□□ -0.87
SMG1-202ENST00000446231 ARGLU1Q9NWB6 273 aaPredicted RBP9.61□□□□□ -0.87
SMG1-202ENST00000446231 NUP155O75694 1391 aa9.6□□□□□ -0.87
SMG1-202ENST00000446231 CDC45O75419 566 aa9.6□□□□□ -0.87
SMG1-202ENST00000446231 CALRP27797 417 aaKnown RBP9.6□□□□□ -0.87
SMG1-202ENST00000446231 CCDC112Q8NEF3 446 aa9.59□□□□□ -0.87
SMG1-202ENST00000446231 CCDC94Q9BW85 323 aaPredicted RBP9.59□□□□□ -0.87
SMG1-202ENST00000446231 TPD52L1Q16890 204 aaPredicted RBP9.59□□□□□ -0.87
SMG1-202ENST00000446231 CGNQ9P2M7 1197 aaKnown RBP9.59□□□□□ -0.87
SMG1-202ENST00000446231 PANK2Q9BZ23 570 aa9.59□□□□□ -0.87
SMG1-202ENST00000446231 EIF3AQ14152 1382 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms