RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 BRD4O60885 1362 aaPredicted RBP29.36■■■□□ 2.29
SKIDA1-201ENST00000444772 SAMD9LQ8IVG5 1584 aa29.36■■■□□ 2.29
SKIDA1-201ENST00000444772 DCAF11Q8TEB1 546 aa29.34■■■□□ 2.29
SKIDA1-201ENST00000444772 E9PCH4 1651 aa29.34■■■□□ 2.29
SKIDA1-201ENST00000444772 ST20-MTHFSA0A0A6YYL1 179 aa29.34■■■□□ 2.29
SKIDA1-201ENST00000444772 CDC42BPBQ9Y5S2 1711 aa29.33■■■□□ 2.29
SKIDA1-201ENST00000444772 LRPPRCP42704 1394 aaKnown RBP29.32■■■□□ 2.28
SKIDA1-201ENST00000444772 MYBBP1AQ9BQG0 1328 aaKnown RBP29.32■■■□□ 2.28
SKIDA1-201ENST00000444772 MAST1Q9Y2H9 1570 aa29.32■■■□□ 2.28
SKIDA1-201ENST00000444772 KDM2AQ9Y2K7 1162 aa29.3■■■□□ 2.28
SKIDA1-201ENST00000444772 CCDC144AA2RUR9 1427 aa29.28■■■□□ 2.28
SKIDA1-201ENST00000444772 UNC13BO14795 1591 aa29.27■■■□□ 2.28
SKIDA1-201ENST00000444772 PRAG1Q86YV5 1406 aa29.27■■■□□ 2.28
SKIDA1-201ENST00000444772 TRPM1Q7Z4N2 1603 aa29.27■■■□□ 2.28
SKIDA1-201ENST00000444772 ERICH6Q7L0X2 663 aa29.24■■■□□ 2.27
SKIDA1-201ENST00000444772 CNGB1Q14028 1251 aaPredicted RBP29.23■■■□□ 2.27
SKIDA1-201ENST00000444772 LAMC1P11047 1609 aa29.23■■■□□ 2.27
SKIDA1-201ENST00000444772 GPRASP1Q5JY77 1395 aa29.23■■■□□ 2.27
SKIDA1-201ENST00000444772 PLEKHH2Q8IVE3 1493 aa29.21■■■□□ 2.27
SKIDA1-201ENST00000444772 PLXNC1O60486 1568 aa29.2■■■□□ 2.27
SKIDA1-201ENST00000444772 SYCP2Q9BX26 1530 aa29.19■■■□□ 2.26
SKIDA1-201ENST00000444772 CHD1O14646 1710 aa29.18■■■□□ 2.26
SKIDA1-201ENST00000444772 IQGAP3Q86VI3 1631 aa29.17■■■□□ 2.26
SKIDA1-201ENST00000444772 ARHGAP5Q13017 1502 aa29.17■■■□□ 2.26
SKIDA1-201ENST00000444772 PARD3Q8TEW0 1356 aa29.17■■■□□ 2.26
SKIDA1-201ENST00000444772 WASHC2CQ9Y4E1 1318 aa29.17■■■□□ 2.26
SKIDA1-201ENST00000444772 NLRP13Q86W25 1043 aa29.17■■■□□ 2.26
SKIDA1-201ENST00000444772 CCDC136Q96JN2 1154 aa29.17■■■□□ 2.26
SKIDA1-201ENST00000444772 EIF2AK4Q9P2K8 1649 aaKnown RBP29.14■■■□□ 2.26
SKIDA1-201ENST00000444772 PLA2R1Q13018 1463 aa29.14■■■□□ 2.26
SKIDA1-201ENST00000444772 ATP10AO60312 1499 aa29.13■■■□□ 2.25
SKIDA1-201ENST00000444772 TTC37Q6PGP7 1564 aa29.13■■■□□ 2.25
SKIDA1-201ENST00000444772 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.13■■■□□ 2.25
SKIDA1-201ENST00000444772 PRDM15P57071 1507 aaPredicted RBP29.12■■■□□ 2.25
SKIDA1-201ENST00000444772 A2MP01023 1474 aa29.12■■■□□ 2.25
SKIDA1-201ENST00000444772 SHROOM2Q13796 1616 aa29.12■■■□□ 2.25
SKIDA1-201ENST00000444772 PDE3BQ13370 1112 aa29.11■■■□□ 2.25
SKIDA1-201ENST00000444772 INSRP06213 1382 aa29.11■■■□□ 2.25
SKIDA1-201ENST00000444772 COL17A1Q9UMD9 1497 aaPredicted RBP29.11■■■□□ 2.25
SKIDA1-201ENST00000444772 DUOX2Q9NRD8 1548 aa29.1■■■□□ 2.25
SKIDA1-201ENST00000444772 MYO5CQ9NQX4 1742 aa29.1■■■□□ 2.25
SKIDA1-201ENST00000444772 ZMYM4Q5VZL5 1548 aa29.09■■■□□ 2.25
SKIDA1-201ENST00000444772 MAGI2Q86UL8 1455 aa29.08■■■□□ 2.25
SKIDA1-201ENST00000444772 ERBINQ96RT1 1412 aa29.07■■■□□ 2.24
SKIDA1-201ENST00000444772 PER1O15534 1290 aaPredicted RBP29.07■■■□□ 2.24
SKIDA1-201ENST00000444772 MYT1LQ9UL68 1186 aa29.06■■■□□ 2.24
SKIDA1-201ENST00000444772 ABCC2Q92887 1545 aa29.06■■■□□ 2.24
SKIDA1-201ENST00000444772 NBPF1Q3BBV0 1214 aa29.03■■■□□ 2.24
SKIDA1-201ENST00000444772 RGL3Q3MIN7 710 aa29.03■■■□□ 2.24
SKIDA1-201ENST00000444772 RRP1P56182 461 aaKnown RBP29.01■■■□□ 2.23
SKIDA1-201ENST00000444772 TESK2Q96S53 571 aa29.01■■■□□ 2.23
SKIDA1-201ENST00000444772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29■■■□□ 2.23
SKIDA1-201ENST00000444772 RCAN3Q9UKA8 241 aa28.97■■■□□ 2.23
SKIDA1-201ENST00000444772 TMF1P82094 1093 aa28.97■■■□□ 2.23
SKIDA1-201ENST00000444772 DISP3Q9P2K9 1392 aa28.95■■■□□ 2.23
SKIDA1-201ENST00000444772 PLCH2O75038 1416 aa28.95■■■□□ 2.23
SKIDA1-201ENST00000444772 RNF17Q9BXT8 1623 aaKnown RBP28.95■■■□□ 2.22
SKIDA1-201ENST00000444772 BLMP54132 1417 aaPredicted RBP28.93■■■□□ 2.22
SKIDA1-201ENST00000444772 NOP58Q9Y2X3 529 aaKnown RBP28.93■■■□□ 2.22
SKIDA1-201ENST00000444772 EFCAB2Q5VUJ9 269 aa28.9■■■□□ 2.22
SKIDA1-201ENST00000444772 SENP3-EIF4A1A0A087X0R7 540 aa28.89■■■□□ 2.22
SKIDA1-201ENST00000444772 ANP32AP39687 249 aaKnown RBP28.89■■■□□ 2.22
SKIDA1-201ENST00000444772 STAC3Q96MF2 364 aa28.89■■■□□ 2.22
SKIDA1-201ENST00000444772 PANK3Q9H999 370 aa28.89■■■□□ 2.22
SKIDA1-201ENST00000444772 ABCC1P33527 1531 aa28.87■■■□□ 2.21
SKIDA1-201ENST00000444772 UHRF1BP1LA0JNW5 1464 aa28.86■■■□□ 2.21
SKIDA1-201ENST00000444772 CC2D1BQ5T0F9 858 aaKnown RBP28.84■■■□□ 2.21
SKIDA1-201ENST00000444772 TCERG1O14776 1098 aaKnown RBP28.83■■■□□ 2.21
SKIDA1-201ENST00000444772 ERCC6L2Q5T890 1561 aa28.83■■■□□ 2.21
SKIDA1-201ENST00000444772 EXOC6Q8TAG9 804 aa28.82■■■□□ 2.2
SKIDA1-201ENST00000444772 IPO9Q96P70 1041 aaKnown RBP28.82■■■□□ 2.2
SKIDA1-201ENST00000444772 RTEL1-TNFRSF6BF6WH68 1400 aa28.82■■■□□ 2.2
SKIDA1-201ENST00000444772 ZCCHC11Q5TAX3 1644 aaKnown RBP28.81■■■□□ 2.2
SKIDA1-201ENST00000444772 MADDQ8WXG6 1647 aa28.8■■■□□ 2.2
SKIDA1-201ENST00000444772 ARAP3Q8WWN8 1544 aa28.8■■■□□ 2.2
SKIDA1-201ENST00000444772 TRPM2O94759 1503 aa28.8■■■□□ 2.2
SKIDA1-201ENST00000444772 CLASP1Q7Z460 1538 aa28.8■■■□□ 2.2
SKIDA1-201ENST00000444772 IQGAP1P46940 1657 aa28.79■■■□□ 2.2
SKIDA1-201ENST00000444772 CDCA8Q53HL2 280 aa28.79■■■□□ 2.2
SKIDA1-201ENST00000444772 BCL11AQ9H165 835 aa28.78■■■□□ 2.2
SKIDA1-201ENST00000444772 SALL2Q9Y467 1007 aaPredicted RBP28.77■■■□□ 2.2
SKIDA1-201ENST00000444772 SCAPERQ9BY12 1400 aa28.77■■■□□ 2.2
SKIDA1-201ENST00000444772 WDR7Q9Y4E6 1490 aa28.76■■■□□ 2.19
SKIDA1-201ENST00000444772 TRAPPC8Q9Y2L5 1435 aa28.76■■■□□ 2.19
SKIDA1-201ENST00000444772 PTPRTO14522 1441 aa28.75■■■□□ 2.19
SKIDA1-201ENST00000444772 SPHKAPQ2M3C7 1700 aa28.75■■■□□ 2.19
SKIDA1-201ENST00000444772 MS4A1P11836 297 aa28.75■■■□□ 2.19
SKIDA1-201ENST00000444772 CDCA7LQ96GN5 454 aa28.74■■■□□ 2.19
SKIDA1-201ENST00000444772 CEP152O94986 1710 aa28.74■■■□□ 2.19
SKIDA1-201ENST00000444772 SYNMO15061 1565 aa28.73■■■□□ 2.19
SKIDA1-201ENST00000444772 SCAF11Q99590 1463 aaKnown RBP28.73■■■□□ 2.19
SKIDA1-201ENST00000444772 SPAG9O60271 1321 aaKnown RBP28.72■■■□□ 2.19
SKIDA1-201ENST00000444772 KNSTRNQ9Y448 316 aa28.71■■■□□ 2.19
SKIDA1-201ENST00000444772 DEPDC5O75140 1603 aa28.71■■■□□ 2.19
SKIDA1-201ENST00000444772 ZFYVE16Q7Z3T8 1539 aa28.7■■■□□ 2.18
SKIDA1-201ENST00000444772 ZBTB47Q9UFB7 747 aaPredicted RBP28.7■■■□□ 2.18
SKIDA1-201ENST00000444772 PAK3O75914 559 aaPredicted RBP28.69■■■□□ 2.18
SKIDA1-201ENST00000444772 NEURL4Q96JN8 1562 aa28.69■■■□□ 2.18
SKIDA1-201ENST00000444772 TET3O43151 1660 aa28.67■■■□□ 2.18
SKIDA1-201ENST00000444772 NPC1L1Q9UHC9 1359 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms