RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 ATP7AQ04656 1500 aa21.11■□□□□ 0.97
CPSF7-205ENST00000439958 TRHP20396 242 aaPredicted RBP21.1■□□□□ 0.97
CPSF7-205ENST00000439958 ZNF518AQ6AHZ1 1483 aa21.09■□□□□ 0.97
CPSF7-205ENST00000439958 ERBINQ96RT1 1412 aa21.09■□□□□ 0.97
CPSF7-205ENST00000439958 WASHC2CQ9Y4E1 1318 aa21.09■□□□□ 0.97
CPSF7-205ENST00000439958 ZFYVE16Q7Z3T8 1539 aa21.08■□□□□ 0.96
CPSF7-205ENST00000439958 DHX29Q7Z478 1369 aaKnown RBP21.06■□□□□ 0.96
CPSF7-205ENST00000439958 ARAP3Q8WWN8 1544 aa21.06■□□□□ 0.96
CPSF7-205ENST00000439958 RTEL1-TNFRSF6BF6WH68 1400 aa21.05■□□□□ 0.96
CPSF7-205ENST00000439958 MAST1Q9Y2H9 1570 aa21.05■□□□□ 0.96
CPSF7-205ENST00000439958 TSPOAP1O95153 1857 aa21.05■□□□□ 0.96
CPSF7-205ENST00000439958 TEX14Q8IWB6 1497 aa21.04■□□□□ 0.96
CPSF7-205ENST00000439958 CENPBP07199 599 aaPredicted RBP21.04■□□□□ 0.96
CPSF7-205ENST00000439958 ANP32CO43423 234 aa21.03■□□□□ 0.96
CPSF7-205ENST00000439958 PLPPR3Q6T4P5 718 aa21.03■□□□□ 0.96
CPSF7-205ENST00000439958 PLXNC1O60486 1568 aa21.03■□□□□ 0.96
CPSF7-205ENST00000439958 POGZQ7Z3K3 1410 aa21.03■□□□□ 0.96
CPSF7-205ENST00000439958 A2MP01023 1474 aa21■□□□□ 0.95
CPSF7-205ENST00000439958 ROCK2O75116 1388 aaKnown RBP20.99■□□□□ 0.95
CPSF7-205ENST00000439958 NBPF1Q3BBV0 1214 aa20.98■□□□□ 0.95
CPSF7-205ENST00000439958 NUTM2DQ5VT03 806 aaPredicted RBP20.98■□□□□ 0.95
CPSF7-205ENST00000439958 ARID4BQ4LE39 1312 aaPredicted RBP20.98■□□□□ 0.95
CPSF7-205ENST00000439958 WASHC2AQ641Q2 1341 aa20.98■□□□□ 0.95
CPSF7-205ENST00000439958 C11orf95C9JLR9 678 aaPredicted RBP20.98■□□□□ 0.95
CPSF7-205ENST00000439958 USP47Q96K76 1375 aa20.97■□□□□ 0.95
CPSF7-205ENST00000439958 KDM5DQ9BY66 1539 aa20.95■□□□□ 0.94
CPSF7-205ENST00000439958 YEATS2Q9ULM3 1422 aa20.95■□□□□ 0.94
CPSF7-205ENST00000439958 ST20-MTHFSA0A0A6YYL1 179 aa20.95■□□□□ 0.94
CPSF7-205ENST00000439958 PLA2R1Q13018 1463 aa20.95■□□□□ 0.94
CPSF7-205ENST00000439958 CFAP65Q6ZU64 1925 aaKnown RBP20.94■□□□□ 0.94
CPSF7-205ENST00000439958 NEO1Q92859 1461 aa20.93■□□□□ 0.94
CPSF7-205ENST00000439958 UNC13BO14795 1591 aa20.92■□□□□ 0.94
CPSF7-205ENST00000439958 INO80Q9ULG1 1556 aaPredicted RBP20.91■□□□□ 0.94
CPSF7-205ENST00000439958 ESF1Q9H501 851 aaKnown RBP20.91■□□□□ 0.94
CPSF7-205ENST00000439958 KIDINS220Q9ULH0 1771 aa20.9■□□□□ 0.94
CPSF7-205ENST00000439958 CFAP74Q9C0B2 1584 aa20.89■□□□□ 0.93
CPSF7-205ENST00000439958 STAG3Q9UJ98 1225 aa20.88■□□□□ 0.93
CPSF7-205ENST00000439958 IQGAP3Q86VI3 1631 aa20.88■□□□□ 0.93
CPSF7-205ENST00000439958 KIF7Q2M1P5 1343 aa20.87■□□□□ 0.93
CPSF7-205ENST00000439958 HECW2Q9P2P5 1572 aa20.86■□□□□ 0.93
CPSF7-205ENST00000439958 MLH3Q9UHC1 1453 aa20.86■□□□□ 0.93
CPSF7-205ENST00000439958 DIP2BQ9P265 1576 aa20.84■□□□□ 0.93
CPSF7-205ENST00000439958 UGGT1Q9NYU2 1555 aa20.84■□□□□ 0.93
CPSF7-205ENST00000439958 CCDC7Q96M83 1385 aa20.83■□□□□ 0.93
CPSF7-205ENST00000439958 ATP10AO60312 1499 aa20.83■□□□□ 0.92
CPSF7-205ENST00000439958 FBXO31Q5XUX0 539 aaPredicted RBP20.81■□□□□ 0.92
CPSF7-205ENST00000439958 MAGI2Q86UL8 1455 aa20.81■□□□□ 0.92
CPSF7-205ENST00000439958 CFAP70Q5T0N1 1121 aa20.79■□□□□ 0.92
CPSF7-205ENST00000439958 ABCA6Q8N139 1617 aa20.79■□□□□ 0.92
CPSF7-205ENST00000439958 MAP3K4Q9Y6R4 1608 aa20.79■□□□□ 0.92
CPSF7-205ENST00000439958 E9PCH4 1651 aa20.79■□□□□ 0.92
CPSF7-205ENST00000439958 KDM5CP41229 1560 aa20.79■□□□□ 0.92
CPSF7-205ENST00000439958 PRAG1Q86YV5 1406 aa20.78■□□□□ 0.92
CPSF7-205ENST00000439958 ADGRF5Q8IZF2 1346 aa20.76■□□□□ 0.91
CPSF7-205ENST00000439958 NPATQ14207 1427 aa20.76■□□□□ 0.91
CPSF7-205ENST00000439958 RALGAPBQ86X10 1494 aa20.74■□□□□ 0.91
CPSF7-205ENST00000439958 FRMPD1Q5SYB0 1578 aa20.74■□□□□ 0.91
CPSF7-205ENST00000439958 PRDM15P57071 1507 aaPredicted RBP20.73■□□□□ 0.91
CPSF7-205ENST00000439958 SENP3-EIF4A1A0A087X0R7 540 aa20.73■□□□□ 0.91
CPSF7-205ENST00000439958 IDI1Q13907 227 aa20.73■□□□□ 0.91
CPSF7-205ENST00000439958 TMEM132EQ6IEE7 984 aa20.73■□□□□ 0.91
CPSF7-205ENST00000439958 CEP152O94986 1710 aa20.72■□□□□ 0.91
CPSF7-205ENST00000439958 GLI2P10070 1586 aa20.72■□□□□ 0.91
CPSF7-205ENST00000439958 UHRF1BP1Q6BDS2 1440 aa20.72■□□□□ 0.91
CPSF7-205ENST00000439958 DIP2CQ9Y2E4 1556 aa20.72■□□□□ 0.91
CPSF7-205ENST00000439958 COL17A1Q9UMD9 1497 aaPredicted RBP20.72■□□□□ 0.91
CPSF7-205ENST00000439958 FAM9BQ8IZU0 186 aa20.71■□□□□ 0.91
CPSF7-205ENST00000439958 BCANQ96GW7 911 aa20.71■□□□□ 0.91
CPSF7-205ENST00000439958 SPATA31E1Q6ZUB1 1445 aa20.71■□□□□ 0.91
CPSF7-205ENST00000439958 SAFB2Q14151 953 aaKnown RBP eCLIP20.71■□□□□ 0.91
CPSF7-205ENST00000439958 TET3O43151 1660 aa20.71■□□□□ 0.91
CPSF7-205ENST00000439958 TRAK1Q9UPV9 953 aa20.7■□□□□ 0.9
CPSF7-205ENST00000439958 GTF3C3Q9Y5Q9 886 aa20.69■□□□□ 0.9
CPSF7-205ENST00000439958 MROH1Q8NDA8 1641 aa20.69■□□□□ 0.9
CPSF7-205ENST00000439958 STK26Q9P289 416 aa20.69■□□□□ 0.9
CPSF7-205ENST00000439958 CLTCL1P53675 1640 aa20.69■□□□□ 0.9
CPSF7-205ENST00000439958 TRPM2O94759 1503 aa20.69■□□□□ 0.9
CPSF7-205ENST00000439958 MRS2Q9HD23 443 aa20.69■□□□□ 0.9
CPSF7-205ENST00000439958 PTPRTO14522 1441 aa20.68■□□□□ 0.9
CPSF7-205ENST00000439958 CNTLNQ9NXG0 1405 aa20.68■□□□□ 0.9
CPSF7-205ENST00000439958 EFCAB6Q5THR3 1501 aa20.68■□□□□ 0.9
CPSF7-205ENST00000439958 PPRC1Q5VV67 1664 aaKnown RBP20.67■□□□□ 0.9
CPSF7-205ENST00000439958 RICTORQ6R327 1708 aa20.67■□□□□ 0.9
CPSF7-205ENST00000439958 DEPDC5O75140 1603 aa20.67■□□□□ 0.9
CPSF7-205ENST00000439958 EIF2AK4Q9P2K8 1649 aaKnown RBP20.67■□□□□ 0.9
CPSF7-205ENST00000439958 TMF1P82094 1093 aa20.67■□□□□ 0.9
CPSF7-205ENST00000439958 NOS1P29475 1434 aa20.67■□□□□ 0.9
CPSF7-205ENST00000439958 SPHKAPQ2M3C7 1700 aa20.67■□□□□ 0.9
CPSF7-205ENST00000439958 SCAF1Q9H7N4 1312 aaKnown RBP20.66■□□□□ 0.9
CPSF7-205ENST00000439958 ABCC3O15438 1527 aa20.65■□□□□ 0.9
CPSF7-205ENST00000439958 CCDC184Q52MB2 194 aa20.64■□□□□ 0.89
CPSF7-205ENST00000439958 PRKRIP1Q9H875 184 aaPredicted RBP20.64■□□□□ 0.89
CPSF7-205ENST00000439958 HNRNPUQ00839 825 aaKnown RBP eCLIP20.62■□□□□ 0.89
CPSF7-205ENST00000439958 CC2D1BQ5T0F9 858 aaKnown RBP20.62■□□□□ 0.89
CPSF7-205ENST00000439958 VWDEQ8N2E2 1590 aa20.61■□□□□ 0.89
CPSF7-205ENST00000439958 CEBPAP49715 358 aaPredicted RBP20.61■□□□□ 0.89
CPSF7-205ENST00000439958 CCER2I3L3R5 266 aa20.6■□□□□ 0.89
CPSF7-205ENST00000439958 VGFO15240 615 aaPredicted RBP20.59■□□□□ 0.89
CPSF7-205ENST00000439958 SLC52A1Q9NWF4 448 aa20.59■□□□□ 0.89
CPSF7-205ENST00000439958 RNF17Q9BXT8 1623 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms