RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 ROCK2O75116 1388 aaKnown RBP20.82■□□□□ 0.92
APP-208ENST00000439274 ARHGEF12Q9NZN5 1544 aa20.82■□□□□ 0.92
APP-208ENST00000439274 ZCCHC11Q5TAX3 1644 aaKnown RBP20.81■□□□□ 0.92
APP-208ENST00000439274 UHRF1BP1LA0JNW5 1464 aa20.81■□□□□ 0.92
APP-208ENST00000439274 KDM5DQ9BY66 1539 aa20.8■□□□□ 0.92
APP-208ENST00000439274 RNF123Q5XPI4 1314 aa20.78■□□□□ 0.92
APP-208ENST00000439274 TTC37Q6PGP7 1564 aa20.75■□□□□ 0.91
APP-208ENST00000439274 CCDC136Q96JN2 1154 aa20.74■□□□□ 0.91
APP-208ENST00000439274 PREX2Q70Z35 1606 aa20.73■□□□□ 0.91
APP-208ENST00000439274 MYBBP1AQ9BQG0 1328 aaKnown RBP20.73■□□□□ 0.91
APP-208ENST00000439274 OSCARQ8IYS5 282 aa20.73■□□□□ 0.91
APP-208ENST00000439274 CDC42BPBQ9Y5S2 1711 aa20.73■□□□□ 0.91
APP-208ENST00000439274 ARHGEF5Q12774 1597 aa20.72■□□□□ 0.91
APP-208ENST00000439274 FAM135AQ9P2D6 1515 aa20.72■□□□□ 0.91
APP-208ENST00000439274 LRPPRCP42704 1394 aaKnown RBP20.72■□□□□ 0.91
APP-208ENST00000439274 SAMD9LQ8IVG5 1584 aa20.72■□□□□ 0.91
APP-208ENST00000439274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.72■□□□□ 0.91
APP-208ENST00000439274 RGL3Q3MIN7 710 aa20.71■□□□□ 0.91
APP-208ENST00000439274 CCDC141Q6ZP82 1450 aa20.7■□□□□ 0.9
APP-208ENST00000439274 BRD4O60885 1362 aaPredicted RBP20.7■□□□□ 0.9
APP-208ENST00000439274 RALBP1Q15311 655 aa20.69■□□□□ 0.9
APP-208ENST00000439274 E9PCH4 1651 aa20.69■□□□□ 0.9
APP-208ENST00000439274 NBPF1Q3BBV0 1214 aa20.69■□□□□ 0.9
APP-208ENST00000439274 SALL2Q9Y467 1007 aaPredicted RBP20.69■□□□□ 0.9
APP-208ENST00000439274 BCL11AQ9H165 835 aa20.68■□□□□ 0.9
APP-208ENST00000439274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.67■□□□□ 0.92e-7■■□□□ 12.4
APP-208ENST00000439274 PRAG1Q86YV5 1406 aa20.67■□□□□ 0.9
APP-208ENST00000439274 CCDC144AA2RUR9 1427 aa20.67■□□□□ 0.9
APP-208ENST00000439274 TRPM1Q7Z4N2 1603 aa20.65■□□□□ 0.9
APP-208ENST00000439274 KTN1Q86UP2 1357 aaKnown RBP20.64■□□□□ 0.89
APP-208ENST00000439274 MYO5CQ9NQX4 1742 aa20.64■□□□□ 0.89
APP-208ENST00000439274 SYCP2Q9BX26 1530 aa20.63■□□□□ 0.89
APP-208ENST00000439274 PLA2R1Q13018 1463 aa20.63■□□□□ 0.89
APP-208ENST00000439274 NLRP13Q86W25 1043 aa20.61■□□□□ 0.89
APP-208ENST00000439274 PARD3Q8TEW0 1356 aa20.61■□□□□ 0.89
APP-208ENST00000439274 A2MP01023 1474 aa20.6■□□□□ 0.89
APP-208ENST00000439274 PAK3O75914 559 aaPredicted RBP20.6■□□□□ 0.89
APP-208ENST00000439274 RRP1P56182 461 aaKnown RBP20.6■□□□□ 0.89
APP-208ENST00000439274 PER1O15534 1290 aaPredicted RBP20.59■□□□□ 0.89
APP-208ENST00000439274 NOP58Q9Y2X3 529 aaKnown RBP20.59■□□□□ 0.89
APP-208ENST00000439274 ARHGAP5Q13017 1502 aa20.59■□□□□ 0.89
APP-208ENST00000439274 DISP3Q9P2K9 1392 aa20.58■□□□□ 0.89
APP-208ENST00000439274 CC2D1BQ5T0F9 858 aaKnown RBP20.58■□□□□ 0.89
APP-208ENST00000439274 RSPH4AQ5TD94 716 aa20.58■□□□□ 0.89
APP-208ENST00000439274 EXOC6Q8TAG9 804 aa20.58■□□□□ 0.89
APP-208ENST00000439274 RCAN3Q9UKA8 241 aa20.57■□□□□ 0.88
APP-208ENST00000439274 PLEKHH2Q8IVE3 1493 aa20.56■□□□□ 0.88
APP-208ENST00000439274 UNC13BO14795 1591 aa20.56■□□□□ 0.88
APP-208ENST00000439274 TESK2Q96S53 571 aa20.56■□□□□ 0.88
APP-208ENST00000439274 WDR7Q9Y4E6 1490 aa20.55■□□□□ 0.88
APP-208ENST00000439274 GPRASP1Q5JY77 1395 aa20.55■□□□□ 0.88
APP-208ENST00000439274 CDCA7LQ96GN5 454 aa20.55■□□□□ 0.88
APP-208ENST00000439274 COL17A1Q9UMD9 1497 aaPredicted RBP20.54■□□□□ 0.88
APP-208ENST00000439274 PANK3Q9H999 370 aa20.53■□□□□ 0.88
APP-208ENST00000439274 PRDM15P57071 1507 aaPredicted RBP20.52■□□□□ 0.88
APP-208ENST00000439274 MAST1Q9Y2H9 1570 aa20.52■□□□□ 0.87
APP-208ENST00000439274 PLCH2O75038 1416 aa20.51■□□□□ 0.87
APP-208ENST00000439274 ERBINQ96RT1 1412 aa20.5■□□□□ 0.87
APP-208ENST00000439274 ANP32AP39687 249 aaKnown RBP20.5■□□□□ 0.87
APP-208ENST00000439274 NBR1Q14596 966 aa20.5■□□□□ 0.87
APP-208ENST00000439274 IQGAP3Q86VI3 1631 aa20.49■□□□□ 0.87
APP-208ENST00000439274 ASXL2Q76L83 1435 aa20.49■□□□□ 0.87
APP-208ENST00000439274 ABCA9Q8IUA7 1624 aa20.48■□□□□ 0.87
APP-208ENST00000439274 PDE3BQ13370 1112 aa20.48■□□□□ 0.87
APP-208ENST00000439274 IPO9Q96P70 1041 aaKnown RBP20.47■□□□□ 0.87
APP-208ENST00000439274 ABCC1P33527 1531 aa20.47■□□□□ 0.87
APP-208ENST00000439274 LAMC1P11047 1609 aa20.46■□□□□ 0.87
APP-208ENST00000439274 PLIN1O60240 522 aa20.46■□□□□ 0.87
APP-208ENST00000439274 PLXNC1O60486 1568 aa20.46■□□□□ 0.87
APP-208ENST00000439274 TMF1P82094 1093 aa20.45■□□□□ 0.86
APP-208ENST00000439274 ARAP3Q8WWN8 1544 aa20.45■□□□□ 0.86
APP-208ENST00000439274 WASHC2CQ9Y4E1 1318 aa20.43■□□□□ 0.86
APP-208ENST00000439274 EIF2AK4Q9P2K8 1649 aaKnown RBP20.43■□□□□ 0.86
APP-208ENST00000439274 BLMP54132 1417 aaPredicted RBP20.43■□□□□ 0.86
APP-208ENST00000439274 DUOX2Q9NRD8 1548 aa20.43■□□□□ 0.86
APP-208ENST00000439274 RIMBP3CA6NJZ7 1639 aa20.42■□□□□ 0.86
APP-208ENST00000439274 RIMBP3BA6NNM3 1639 aa20.42■□□□□ 0.86
APP-208ENST00000439274 RIMBP3Q9UFD9 1639 aa20.42■□□□□ 0.86
APP-208ENST00000439274 DEKP35659 375 aaKnown RBP20.42■□□□□ 0.86
APP-208ENST00000439274 NPM2Q86SE8 214 aaKnown RBP20.41■□□□□ 0.86
APP-208ENST00000439274 ATP10AO60312 1499 aa20.4■□□□□ 0.86
APP-208ENST00000439274 MAGI2Q86UL8 1455 aa20.4■□□□□ 0.86
APP-208ENST00000439274 ZBTB47Q9UFB7 747 aaPredicted RBP20.4■□□□□ 0.86
APP-208ENST00000439274 MYT1LQ9UL68 1186 aa20.38■□□□□ 0.85
APP-208ENST00000439274 TCERG1O14776 1098 aaKnown RBP20.37■□□□□ 0.85
APP-208ENST00000439274 ADAMTS8Q9UP79 889 aa20.37■□□□□ 0.85
APP-208ENST00000439274 TRAPPC8Q9Y2L5 1435 aa20.37■□□□□ 0.85
APP-208ENST00000439274 EFCAB2Q5VUJ9 269 aa20.37■□□□□ 0.85
APP-208ENST00000439274 SKAP1Q86WV1 359 aa20.37■□□□□ 0.85
APP-208ENST00000439274 RNF17Q9BXT8 1623 aaKnown RBP20.37■□□□□ 0.85
APP-208ENST00000439274 CRBNQ96SW2 442 aa20.36■□□□□ 0.85
APP-208ENST00000439274 PDE4AP27815 886 aa20.36■□□□□ 0.85
APP-208ENST00000439274 FANCAO15360 1455 aa20.34■□□□□ 0.85
APP-208ENST00000439274 ZMYM4Q5VZL5 1548 aa20.33■□□□□ 0.85
APP-208ENST00000439274 INSRP06213 1382 aa20.33■□□□□ 0.85
APP-208ENST00000439274 C20orf194Q5TEA3 1177 aa20.32■□□□□ 0.84
APP-208ENST00000439274 PPP2R1AP30153 589 aa20.32■□□□□ 0.84
APP-208ENST00000439274 KNSTRNQ9Y448 316 aa20.32■□□□□ 0.84
APP-208ENST00000439274 MADDQ8WXG6 1647 aa20.32■□□□□ 0.84
APP-208ENST00000439274 NPM1P06748 294 aaKnown RBP eCLIP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms