RNA–Protein interactions for RNA: ENST00000439021.5

LYRM1-204, Transcript of LYR motif containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LYRM1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-204ENST00000439021 SCAPERQ9BY12 1400 aa11.84□□□□□ -0.51
LYRM1-204ENST00000439021 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.84□□□□□ -0.51
LYRM1-204ENST00000439021 SETQ01105 290 aaPredicted RBP11.83□□□□□ -0.52
LYRM1-204ENST00000439021 RALBP1Q15311 655 aa11.83□□□□□ -0.52
LYRM1-204ENST00000439021 NINLQ9Y2I6 1382 aa11.82□□□□□ -0.52
LYRM1-204ENST00000439021 SPDYE1Q8NFV5 336 aaPredicted RBP11.82□□□□□ -0.52
LYRM1-204ENST00000439021 CSPP1Q1MSJ5 1256 aa11.81□□□□□ -0.52
LYRM1-204ENST00000439021 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.81□□□□□ -0.52
LYRM1-204ENST00000439021 WWC1Q8IX03 1113 aa11.81□□□□□ -0.52
LYRM1-204ENST00000439021 VPS8Q8N3P4 1428 aa11.81□□□□□ -0.52
LYRM1-204ENST00000439021 RRBP1Q9P2E9 1410 aaKnown RBP11.8□□□□□ -0.52
LYRM1-204ENST00000439021 PLCD3Q8N3E9 789 aa11.79□□□□□ -0.52
LYRM1-204ENST00000439021 PLCD4Q9BRC7 762 aa11.79□□□□□ -0.52
LYRM1-204ENST00000439021 GOLGA3Q08378 1498 aa11.79□□□□□ -0.52
LYRM1-204ENST00000439021 NBPF20Q3BBV1 942 aa11.79□□□□□ -0.52
LYRM1-204ENST00000439021 ZSCAN30Q86W11 494 aa11.79□□□□□ -0.52
LYRM1-204ENST00000439021 EFCC1Q9HA90 598 aa11.79□□□□□ -0.52
LYRM1-204ENST00000439021 NUDCQ9Y266 331 aa11.79□□□□□ -0.52
LYRM1-204ENST00000439021 RSF1Q96T23 1441 aaPredicted RBP11.78□□□□□ -0.52
LYRM1-204ENST00000439021 MAPKBP1O60336 1514 aa11.78□□□□□ -0.52
LYRM1-204ENST00000439021 CCDC66A2RUB6 948 aa11.78□□□□□ -0.52
LYRM1-204ENST00000439021 CC2D1BQ5T0F9 858 aaKnown RBP11.78□□□□□ -0.52
LYRM1-204ENST00000439021 CREBRFQ8IUR6 639 aa11.78□□□□□ -0.52
LYRM1-204ENST00000439021 PITPNM1O00562 1244 aa11.77□□□□□ -0.53
LYRM1-204ENST00000439021 APPP05067 770 aa11.77□□□□□ -0.53
LYRM1-204ENST00000439021 MCM5P33992 734 aa11.77□□□□□ -0.53
LYRM1-204ENST00000439021 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.53
LYRM1-204ENST00000439021 WDR97A6NE52 1622 aa11.77□□□□□ -0.53
LYRM1-204ENST00000439021 CCDC173Q0VFZ6 552 aa11.75□□□□□ -0.53
LYRM1-204ENST00000439021 POGKQ9P215 609 aa11.75□□□□□ -0.53
LYRM1-204ENST00000439021 KCNG1Q9UIX4 513 aa11.75□□□□□ -0.53
LYRM1-204ENST00000439021 NCOA2Q15596 1464 aa11.75□□□□□ -0.53
LYRM1-204ENST00000439021 ZNF500O60304 480 aaPredicted RBP11.75□□□□□ -0.53
LYRM1-204ENST00000439021 BECN1Q14457 450 aa11.75□□□□□ -0.53
LYRM1-204ENST00000439021 PPP1R9BQ96SB3 815 aa11.75□□□□□ -0.53
LYRM1-204ENST00000439021 IBTKQ9P2D0 1353 aaPredicted RBP11.74□□□□□ -0.53
LYRM1-204ENST00000439021 FAM13BQ9NYF5 915 aa11.74□□□□□ -0.53
LYRM1-204ENST00000439021 VGLL3A8MV65 326 aa11.73□□□□□ -0.53
LYRM1-204ENST00000439021 CTR9Q6PD62 1173 aa11.73□□□□□ -0.53
LYRM1-204ENST00000439021 EIF4G1Q04637 1599 aaKnown RBP11.72□□□□□ -0.53
LYRM1-204ENST00000439021 GABPB1Q06547 395 aaPredicted RBP11.72□□□□□ -0.53
LYRM1-204ENST00000439021 NBPF1Q3BBV0 1214 aa11.72□□□□□ -0.53
LYRM1-204ENST00000439021 POLR3GLQ9BT43 218 aa11.72□□□□□ -0.53
LYRM1-204ENST00000439021 CARD10Q9BWT7 1032 aa11.72□□□□□ -0.53
LYRM1-204ENST00000439021 GRPEL1Q9HAV7 217 aa11.72□□□□□ -0.53
LYRM1-204ENST00000439021 CLEC11AQ9Y240 323 aa11.72□□□□□ -0.53
LYRM1-204ENST00000439021 FHAD1B1AJZ9 1412 aa11.72□□□□□ -0.53
LYRM1-204ENST00000439021 CFAP65Q6ZU64 1925 aaKnown RBP11.72□□□□□ -0.53
LYRM1-204ENST00000439021 PIP4P2Q8N4L2 257 aa11.71□□□□□ -0.53
LYRM1-204ENST00000439021 ERBB4Q15303 1308 aa11.71□□□□□ -0.54
LYRM1-204ENST00000439021 NPM1P06748 294 aaKnown RBP eCLIP11.71□□□□□ -0.54
LYRM1-204ENST00000439021 MSNP26038 577 aaKnown RBP11.71□□□□□ -0.54
LYRM1-204ENST00000439021 IRX5P78411 483 aaPredicted RBP11.71□□□□□ -0.54
LYRM1-204ENST00000439021 SASS6Q6UVJ0 657 aa11.71□□□□□ -0.54
LYRM1-204ENST00000439021 KIF3AQ9Y496 699 aa11.71□□□□□ -0.54
LYRM1-204ENST00000439021 TULP2O00295 520 aa11.7□□□□□ -0.54
LYRM1-204ENST00000439021 VIRMAQ69YN4 1812 aaKnown RBP11.7□□□□□ -0.54
LYRM1-204ENST00000439021 BAZ1BQ9UIG0 1483 aaKnown RBP11.69□□□□□ -0.54
LYRM1-204ENST00000439021 CLIP1P30622 1438 aa11.69□□□□□ -0.54
LYRM1-204ENST00000439021 UQCRHLA0A096LP55 91 aa11.69□□□□□ -0.54
LYRM1-204ENST00000439021 UQCRHP07919 91 aa11.69□□□□□ -0.54
LYRM1-204ENST00000439021 HSP90AB3PQ58FF7 597 aa11.68□□□□□ -0.54
LYRM1-204ENST00000439021 PUS7Q96PZ0 661 aaKnown RBP11.68□□□□□ -0.54
LYRM1-204ENST00000439021 KIF21BO75037 1637 aa11.68□□□□□ -0.54
LYRM1-204ENST00000439021 SOX12O15370 315 aa11.67□□□□□ -0.54
LYRM1-204ENST00000439021 MFAP1P55081 439 aaKnown RBP11.67□□□□□ -0.54
LYRM1-204ENST00000439021 FAM161AQ3B820 660 aa11.67□□□□□ -0.54
LYRM1-204ENST00000439021 SLC52A1Q9NWF4 448 aa11.67□□□□□ -0.54
LYRM1-204ENST00000439021 GTF2F1P35269 517 aaKnown RBP eCLIP11.67□□□□□ -0.541e-6■■□□□ 14.1
LYRM1-204ENST00000439021 TIGD1Q96MW7 591 aa11.67□□□□□ -0.54
LYRM1-204ENST00000439021 FEZ1Q99689 392 aa11.67□□□□□ -0.54
LYRM1-204ENST00000439021 CALCOCO1Q9P1Z2 691 aa11.67□□□□□ -0.54
LYRM1-204ENST00000439021 ERICH3Q5RHP9 1530 aa11.66□□□□□ -0.54
LYRM1-204ENST00000439021 RAD50Q92878 1312 aa11.66□□□□□ -0.54
LYRM1-204ENST00000439021 DDX11L8A8MPP1 907 aa11.66□□□□□ -0.54
LYRM1-204ENST00000439021 RBM25P49756 843 aaKnown RBP11.66□□□□□ -0.54
LYRM1-204ENST00000439021 HMGN5P82970 282 aaKnown RBP11.66□□□□□ -0.54
LYRM1-204ENST00000439021 CNTLNQ9NXG0 1405 aa11.65□□□□□ -0.54
LYRM1-204ENST00000439021 PATL2C9JE40 543 aaKnown RBP11.65□□□□□ -0.54
LYRM1-204ENST00000439021 TPRNQ4KMQ1 711 aa11.65□□□□□ -0.54
LYRM1-204ENST00000439021 PRIMPOLQ96LW4 560 aa11.65□□□□□ -0.54
LYRM1-204ENST00000439021 ABCA5Q8WWZ7 1642 aa11.65□□□□□ -0.54
LYRM1-204ENST00000439021 HAX1O00165 279 aa11.64□□□□□ -0.55
LYRM1-204ENST00000439021 EGFL6Q8IUX8 553 aa11.64□□□□□ -0.55
LYRM1-204ENST00000439021 RAI14Q9P0K7 980 aa11.64□□□□□ -0.55
LYRM1-204ENST00000439021 CCDC88BA6NC98 1476 aa11.64□□□□□ -0.55
LYRM1-204ENST00000439021 SCRIBQ14160 1630 aa11.64□□□□□ -0.55
LYRM1-204ENST00000439021 ZMYM3Q14202 1370 aa11.64□□□□□ -0.55
LYRM1-204ENST00000439021 KTN1Q86UP2 1357 aaKnown RBP11.64□□□□□ -0.55
LYRM1-204ENST00000439021 PRR29P0C7W0 189 aa11.63□□□□□ -0.55
LYRM1-204ENST00000439021 BRMS1Q9HCU9 246 aa11.63□□□□□ -0.55
LYRM1-204ENST00000439021 PRDM10Q9NQV6 1147 aa11.63□□□□□ -0.55
LYRM1-204ENST00000439021 RBM28Q9NW13 759 aaKnown RBP11.63□□□□□ -0.55
LYRM1-204ENST00000439021 AKNAQ7Z591 1439 aa11.63□□□□□ -0.55
LYRM1-204ENST00000439021 SKOR2Q2VWA4 1001 aaPredicted RBP11.62□□□□□ -0.55
LYRM1-204ENST00000439021 NBPF11Q86T75 865 aa11.62□□□□□ -0.55
LYRM1-204ENST00000439021 PANK2Q9BZ23 570 aa11.62□□□□□ -0.55
LYRM1-204ENST00000439021 CGNQ9P2M7 1197 aaKnown RBP11.62□□□□□ -0.55
LYRM1-204ENST00000439021 NOL7Q9UMY1 257 aaKnown RBP11.62□□□□□ -0.55
LYRM1-204ENST00000439021 SATB1Q01826 763 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms