RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 PRKRIP1Q9H875 184 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC9-202ENST00000438773 ZBTB47Q9UFB7 747 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC9-202ENST00000438773 EIF3AQ14152 1382 aaKnown RBP15.24■□□□□ 0.03
TRAPPC9-202ENST00000438773 NCOA1Q15788 1441 aa15.23■□□□□ 0.03
TRAPPC9-202ENST00000438773 PLEKHG5O94827 1062 aa15.23■□□□□ 0.03
TRAPPC9-202ENST00000438773 ATP10BO94823 1461 aa15.23■□□□□ 0.03
TRAPPC9-202ENST00000438773 WASHC2AQ641Q2 1341 aa15.23■□□□□ 0.03
TRAPPC9-202ENST00000438773 TARBP1Q13395 1621 aaKnown RBP15.23■□□□□ 0.03
TRAPPC9-202ENST00000438773 MORC1Q86VD1 984 aa15.23■□□□□ 0.03
TRAPPC9-202ENST00000438773 KIF7Q2M1P5 1343 aa15.22■□□□□ 0.03
TRAPPC9-202ENST00000438773 B4GALNT3Q6L9W6 998 aa15.22■□□□□ 0.03
TRAPPC9-202ENST00000438773 RAPGEF6Q8TEU7 1601 aa15.22■□□□□ 0.03
TRAPPC9-202ENST00000438773 AKNAQ7Z591 1439 aa15.21■□□□□ 0.03
TRAPPC9-202ENST00000438773 GPATCH8Q9UKJ3 1502 aaKnown RBP15.21■□□□□ 0.03
TRAPPC9-202ENST00000438773 CCDC7Q96M83 1385 aa15.21■□□□□ 0.03
TRAPPC9-202ENST00000438773 CCDC141Q6ZP82 1450 aa15.21■□□□□ 0.02
TRAPPC9-202ENST00000438773 PANK3Q9H999 370 aa15.2■□□□□ 0.02
TRAPPC9-202ENST00000438773 KIF14Q15058 1648 aa15.2■□□□□ 0.02
TRAPPC9-202ENST00000438773 RAPGEF3O95398 923 aa15.2■□□□□ 0.02
TRAPPC9-202ENST00000438773 KIAA0556O60303 1618 aa15.2■□□□□ 0.02
TRAPPC9-202ENST00000438773 CFAP43Q8NDM7 1665 aa15.2■□□□□ 0.02
TRAPPC9-202ENST00000438773 VGFO15240 615 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC9-202ENST00000438773 NLRP13Q86W25 1043 aa15.19■□□□□ 0.02
TRAPPC9-202ENST00000438773 NUDCQ9Y266 331 aa15.19■□□□□ 0.02
TRAPPC9-202ENST00000438773 U2SURPO15042 1029 aaKnown RBP15.18■□□□□ 0.02
TRAPPC9-202ENST00000438773 NUP160Q12769 1436 aa15.18■□□□□ 0.02
TRAPPC9-202ENST00000438773 DISP1Q96F81 1524 aa15.18■□□□□ 0.02
TRAPPC9-202ENST00000438773 ANKRD30BQ9BXX2 1392 aa15.17■□□□□ 0.02
TRAPPC9-202ENST00000438773 PBRM1Q86U86 1689 aa15.17■□□□□ 0.02
TRAPPC9-202ENST00000438773 FANCIQ9NVI1 1328 aa15.17■□□□□ 0.02
TRAPPC9-202ENST00000438773 NBPF1Q3BBV0 1214 aa15.17■□□□□ 0.02
TRAPPC9-202ENST00000438773 C11orf95C9JLR9 678 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC9-202ENST00000438773 ZBTB7CA1YPR0 619 aa15.15■□□□□ 0.02
TRAPPC9-202ENST00000438773 STAC3Q96MF2 364 aa15.15■□□□□ 0.02
TRAPPC9-202ENST00000438773 MAPK8IP3Q9UPT6 1336 aa15.14■□□□□ 0.01
TRAPPC9-202ENST00000438773 HAP1P54257 671 aaPredicted RBP15.14■□□□□ 0.01
TRAPPC9-202ENST00000438773 HDGFL2Q7Z4V5 671 aaPredicted RBP15.13■□□□□ 0.01
TRAPPC9-202ENST00000438773 PPP4R2Q9NY27 417 aa15.13■□□□□ 0.01
TRAPPC9-202ENST00000438773 MYBBP1AQ9BQG0 1328 aaKnown RBP15.12■□□□□ 0.01
TRAPPC9-202ENST00000438773 CFAP70Q5T0N1 1121 aa15.12■□□□□ 0.01
TRAPPC9-202ENST00000438773 SAMD9Q5K651 1589 aa15.11■□□□□ 0.01
TRAPPC9-202ENST00000438773 CD109Q6YHK3 1445 aa15.1■□□□□ 0.01
TRAPPC9-202ENST00000438773 SOX12O15370 315 aa15.1■□□□□ 0.01
TRAPPC9-202ENST00000438773 LAS1LQ9Y4W2 734 aaKnown RBP15.1■□□□□ 0.01
TRAPPC9-202ENST00000438773 KDM5BQ9UGL1 1544 aa15.1■□□□□ 0.01
TRAPPC9-202ENST00000438773 CNTLNQ9NXG0 1405 aa15.1■□□□□ 0.01
TRAPPC9-202ENST00000438773 TMEM132EQ6IEE7 984 aa15.09■□□□□ 0.01
TRAPPC9-202ENST00000438773 LMOD2Q6P5Q4 547 aa15.08■□□□□ 0
TRAPPC9-202ENST00000438773 TERF2IPQ9NYB0 399 aa15.08■□□□□ 0
TRAPPC9-202ENST00000438773 EID1Q9Y6B2 187 aa15.08■□□□□ 0
TRAPPC9-202ENST00000438773 U2AF1L5P0DN76 240 aaPredicted RBP15.07■□□□□ 0
TRAPPC9-202ENST00000438773 U2AF1Q01081 240 aaKnown RBP eCLIP15.07■□□□□ 0
TRAPPC9-202ENST00000438773 ADGRL1O94910 1474 aa15.06■□□□□ 0
TRAPPC9-202ENST00000438773 TCOF1Q13428 1488 aaKnown RBP15.06■□□□□ 0
TRAPPC9-202ENST00000438773 MINK1Q8N4C8 1332 aaPredicted RBP15.06■□□□□ 0
TRAPPC9-202ENST00000438773 CENPJQ9HC77 1338 aaPredicted RBP15.06■□□□□ 0
TRAPPC9-202ENST00000438773 FRAT1Q92837 279 aaPredicted RBP15.05■□□□□ -0
TRAPPC9-202ENST00000438773 EVC2Q86UK5 1308 aa15.05■□□□□ -0
TRAPPC9-202ENST00000438773 CEP170Q5SW79 1584 aa15.05■□□□□ -0
TRAPPC9-202ENST00000438773 NUTM2FA1L443 756 aa15.04■□□□□ -0
TRAPPC9-202ENST00000438773 FANCAO15360 1455 aa15.04■□□□□ -0
TRAPPC9-202ENST00000438773 PAK3O75914 559 aaPredicted RBP15.03■□□□□ -0
TRAPPC9-202ENST00000438773 DEKP35659 375 aaKnown RBP15.03■□□□□ -0
TRAPPC9-202ENST00000438773 RPRD2Q5VT52 1461 aaKnown RBP15.03■□□□□ -0
TRAPPC9-202ENST00000438773 PLCH2O75038 1416 aa15.03■□□□□ -0
TRAPPC9-202ENST00000438773 CCDC146Q8IYE0 955 aa15.03■□□□□ -0
TRAPPC9-202ENST00000438773 RCAN3Q9UKA8 241 aa15.02■□□□□ -0
TRAPPC9-202ENST00000438773 DENND4BO75064 1496 aaPredicted RBP15.02□□□□□ -0.01
TRAPPC9-202ENST00000438773 PNNQ9H307 717 aaKnown RBP15.01□□□□□ -0.01
TRAPPC9-202ENST00000438773 MAGI3Q5TCQ9 1506 aa15.01□□□□□ -0.01
TRAPPC9-202ENST00000438773 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15□□□□□ -0.01
TRAPPC9-202ENST00000438773 A0A0G2JS52 829 aa14.99□□□□□ -0.01
TRAPPC9-202ENST00000438773 FTSJ3Q8IY81 847 aaKnown RBP14.99□□□□□ -0.01
TRAPPC9-202ENST00000438773 ZBED9Q6R2W3 1325 aa14.99□□□□□ -0.01
TRAPPC9-202ENST00000438773 ASXL2Q76L83 1435 aa14.99□□□□□ -0.01
TRAPPC9-202ENST00000438773 KDM6BO15054 1643 aa14.99□□□□□ -0.01
TRAPPC9-202ENST00000438773 ITSN2Q9NZM3 1697 aa14.99□□□□□ -0.01
TRAPPC9-202ENST00000438773 CGNL1Q0VF96 1302 aa14.98□□□□□ -0.01
TRAPPC9-202ENST00000438773 SLC52A1Q9NWF4 448 aa14.98□□□□□ -0.01
TRAPPC9-202ENST00000438773 SYCP2Q9BX26 1530 aa14.98□□□□□ -0.01
TRAPPC9-202ENST00000438773 ERICH6BQ5W0A0 696 aa14.97□□□□□ -0.01
TRAPPC9-202ENST00000438773 NOP58Q9Y2X3 529 aaKnown RBP14.97□□□□□ -0.01
TRAPPC9-202ENST00000438773 GOLGA2Q08379 1002 aa14.97□□□□□ -0.01
TRAPPC9-202ENST00000438773 LRRIQ1Q96JM4 1722 aa14.97□□□□□ -0.01
TRAPPC9-202ENST00000438773 PDE3BQ13370 1112 aa14.96□□□□□ -0.01
TRAPPC9-202ENST00000438773 ERBINQ96RT1 1412 aa14.96□□□□□ -0.02
TRAPPC9-202ENST00000438773 UPF2Q9HAU5 1272 aaKnown RBP14.96□□□□□ -0.02
TRAPPC9-202ENST00000438773 TRAPPC8Q9Y2L5 1435 aa14.95□□□□□ -0.02
TRAPPC9-202ENST00000438773 ABCC2Q92887 1545 aa14.94□□□□□ -0.02
TRAPPC9-202ENST00000438773 NGDNQ8NEJ9 315 aaKnown RBP14.94□□□□□ -0.02
TRAPPC9-202ENST00000438773 WDR7Q9Y4E6 1490 aa14.94□□□□□ -0.02
TRAPPC9-202ENST00000438773 DHX29Q7Z478 1369 aaKnown RBP14.94□□□□□ -0.02
TRAPPC9-202ENST00000438773 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.94□□□□□ -0.02
TRAPPC9-202ENST00000438773 CABP2Q9NPB3 220 aa14.93□□□□□ -0.02
TRAPPC9-202ENST00000438773 MYH16Q9H6N6 1097 aa14.92□□□□□ -0.02
TRAPPC9-202ENST00000438773 RRP7AQ9Y3A4 280 aaKnown RBP14.92□□□□□ -0.02
TRAPPC9-202ENST00000438773 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC9-202ENST00000438773 APAF1O14727 1248 aa14.91□□□□□ -0.02
TRAPPC9-202ENST00000438773 RGS3P49796 1198 aa14.9□□□□□ -0.02
TRAPPC9-202ENST00000438773 SLC12A5Q9H2X9 1139 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms