RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 ARAP1Q96P48 1450 aa11.98□□□□□ -0.49
HMGB2-202ENST00000438704 CTTNBP2Q8WZ74 1663 aa11.97□□□□□ -0.49
HMGB2-202ENST00000438704 ERBB3P21860 1342 aa11.97□□□□□ -0.49
HMGB2-202ENST00000438704 RGL2O15211 777 aa11.97□□□□□ -0.49
HMGB2-202ENST00000438704 SNAPC4Q5SXM2 1469 aa11.95□□□□□ -0.5
HMGB2-202ENST00000438704 GPR153Q6NV75 609 aa11.94□□□□□ -0.5
HMGB2-202ENST00000438704 SYNJ2O15056 1496 aa11.94□□□□□ -0.5
HMGB2-202ENST00000438704 GRIN2AQ12879 1464 aa11.92□□□□□ -0.5
HMGB2-202ENST00000438704 TRIM26Q12899 539 aaPredicted RBP11.92□□□□□ -0.5
HMGB2-202ENST00000438704 SAMD9Q5K651 1589 aa11.92□□□□□ -0.5
HMGB2-202ENST00000438704 MAP3K1Q13233 1512 aa11.91□□□□□ -0.5
HMGB2-202ENST00000438704 KIAA0586Q9BVV6 1533 aa11.91□□□□□ -0.5
HMGB2-202ENST00000438704 VARS2Q5ST30 1063 aaKnown RBP11.9□□□□□ -0.5
HMGB2-202ENST00000438704 NUP160Q12769 1436 aa11.89□□□□□ -0.51
HMGB2-202ENST00000438704 KIF3CO14782 793 aa11.89□□□□□ -0.51
HMGB2-202ENST00000438704 UGGT2Q9NYU1 1516 aa11.89□□□□□ -0.51
HMGB2-202ENST00000438704 IQGAP2Q13576 1575 aa11.88□□□□□ -0.51
HMGB2-202ENST00000438704 ZNF687Q8N1G0 1237 aa11.86□□□□□ -0.51
HMGB2-202ENST00000438704 FMN1Q68DA7 1419 aa11.86□□□□□ -0.51
HMGB2-202ENST00000438704 C2orf72A6NCS6 295 aa11.84□□□□□ -0.51
HMGB2-202ENST00000438704 FYCO1Q9BQS8 1478 aa11.83□□□□□ -0.52
HMGB2-202ENST00000438704 ARSIQ5FYB1 569 aa11.83□□□□□ -0.52
HMGB2-202ENST00000438704 CASKIN1Q8WXD9 1431 aa11.83□□□□□ -0.52
HMGB2-202ENST00000438704 CHMP7Q8WUX9 453 aaPredicted RBP11.82□□□□□ -0.52
HMGB2-202ENST00000438704 CEP170Q5SW79 1584 aa11.82□□□□□ -0.52
HMGB2-202ENST00000438704 FHOD3Q2V2M9 1422 aa11.81□□□□□ -0.52
HMGB2-202ENST00000438704 SLC34A2O95436 690 aa11.8□□□□□ -0.52
HMGB2-202ENST00000438704 PCGF6Q9BYE7 350 aa11.8□□□□□ -0.52
HMGB2-202ENST00000438704 ZNF316A6NFI3 1004 aaPredicted RBP11.79□□□□□ -0.52
HMGB2-202ENST00000438704 RANGAP1P46060 587 aaPredicted RBP11.79□□□□□ -0.52
HMGB2-202ENST00000438704 HS6ST3Q8IZP7 471 aa11.79□□□□□ -0.52
HMGB2-202ENST00000438704 TMC2Q8TDI7 906 aa11.79□□□□□ -0.52
HMGB2-202ENST00000438704 DISP1Q96F81 1524 aa11.78□□□□□ -0.52
HMGB2-202ENST00000438704 PCF11O94913 1555 aaKnown RBP11.77□□□□□ -0.53
HMGB2-202ENST00000438704 TIAM1Q13009 1591 aa11.77□□□□□ -0.53
HMGB2-202ENST00000438704 KIAA0556O60303 1618 aa11.77□□□□□ -0.53
HMGB2-202ENST00000438704 CFAP43Q8NDM7 1665 aa11.75□□□□□ -0.53
HMGB2-202ENST00000438704 PPP1R37O75864 691 aa11.74□□□□□ -0.53
HMGB2-202ENST00000438704 PTGER2P43116 358 aa11.74□□□□□ -0.53
HMGB2-202ENST00000438704 KHSRPQ92945 711 aaKnown RBP eCLIP11.74□□□□□ -0.535e-9■□□□□ 9.7
HMGB2-202ENST00000438704 LRRC9Q6ZRR7 1453 aa11.72□□□□□ -0.53
HMGB2-202ENST00000438704 CARMIL2Q6F5E8 1435 aa11.72□□□□□ -0.53
HMGB2-202ENST00000438704 JPH4Q96JJ6 628 aa11.72□□□□□ -0.53
HMGB2-202ENST00000438704 PCDHGA4Q9Y5G9 962 aa11.72□□□□□ -0.53
HMGB2-202ENST00000438704 CHD1O14646 1710 aa11.72□□□□□ -0.53
HMGB2-202ENST00000438704 SHROOM2Q13796 1616 aa11.71□□□□□ -0.53
HMGB2-202ENST00000438704 CCDC18Q5T9S5 1454 aa11.71□□□□□ -0.53
HMGB2-202ENST00000438704 P3H3Q8IVL6 736 aa11.71□□□□□ -0.53
HMGB2-202ENST00000438704 RNF166Q96A37 237 aaPredicted RBP11.71□□□□□ -0.53
HMGB2-202ENST00000438704 NUDT7P0C024 238 aa11.7□□□□□ -0.54
HMGB2-202ENST00000438704 KANK4Q5T7N3 995 aaPredicted RBP11.7□□□□□ -0.54
HMGB2-202ENST00000438704 DNAJC5Q9H3Z4 198 aa11.7□□□□□ -0.54
HMGB2-202ENST00000438704 RRBP1Q9P2E9 1410 aaKnown RBP11.69□□□□□ -0.54
HMGB2-202ENST00000438704 HECW1Q76N89 1606 aa11.69□□□□□ -0.54
HMGB2-202ENST00000438704 PBX2P40425 430 aa11.69□□□□□ -0.54
HMGB2-202ENST00000438704 PPARGC1BQ86YN6 1023 aaKnown RBP11.69□□□□□ -0.54
HMGB2-202ENST00000438704 MYT1LQ9UL68 1186 aa11.69□□□□□ -0.54
HMGB2-202ENST00000438704 CLASP1Q7Z460 1538 aa11.68□□□□□ -0.54
HMGB2-202ENST00000438704 FOXK1P85037 733 aa11.66□□□□□ -0.54
HMGB2-202ENST00000438704 EPRSP07814 1512 aaKnown RBP11.65□□□□□ -0.54
HMGB2-202ENST00000438704 CHGAP10645 457 aaKnown RBP11.65□□□□□ -0.54
HMGB2-202ENST00000438704 LSM11P83369 360 aaKnown RBP eCLIP11.65□□□□□ -0.54
HMGB2-202ENST00000438704 RYDENQ9NUL5 291 aaKnown RBP11.65□□□□□ -0.54
HMGB2-202ENST00000438704 LHX6Q9UPM6 363 aa11.65□□□□□ -0.54
HMGB2-202ENST00000438704 LRRIQ1Q96JM4 1722 aa11.64□□□□□ -0.55
HMGB2-202ENST00000438704 PSDA5PKW4 1024 aaPredicted RBP11.64□□□□□ -0.55
HMGB2-202ENST00000438704 GPHNQ9NQX3 736 aaPredicted RBP11.64□□□□□ -0.55
HMGB2-202ENST00000438704 EHBP1L1Q8N3D4 1523 aa11.64□□□□□ -0.55
HMGB2-202ENST00000438704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.64□□□□□ -0.55
HMGB2-202ENST00000438704 RAPGEF6Q8TEU7 1601 aa11.64□□□□□ -0.55
HMGB2-202ENST00000438704 ABCA8O94911 1581 aa11.63□□□□□ -0.55
HMGB2-202ENST00000438704 PRG4Q92954 1404 aaPredicted RBP11.63□□□□□ -0.55
HMGB2-202ENST00000438704 PTCD2Q8WV60 388 aaKnown RBP11.63□□□□□ -0.55
HMGB2-202ENST00000438704 ARHGEF11O15085 1522 aa11.63□□□□□ -0.55
HMGB2-202ENST00000438704 NUP153P49790 1475 aaKnown RBP11.63□□□□□ -0.55
HMGB2-202ENST00000438704 ANKRD13DQ6ZTN6 518 aa11.61□□□□□ -0.55
HMGB2-202ENST00000438704 MTUS2Q5JR59 1369 aa11.6□□□□□ -0.55
HMGB2-202ENST00000438704 CCNB3Q8WWL7 1395 aa11.6□□□□□ -0.55
HMGB2-202ENST00000438704 PHLDB1Q86UU1 1377 aa11.59□□□□□ -0.55
HMGB2-202ENST00000438704 KDM4FA0A1W2PPD8 638 aa11.59□□□□□ -0.55
HMGB2-202ENST00000438704 PLPP6Q8IY26 295 aa11.59□□□□□ -0.55
HMGB2-202ENST00000438704 PTPRGP23470 1445 aa11.58□□□□□ -0.56
HMGB2-202ENST00000438704 PLB1Q6P1J6 1458 aa11.57□□□□□ -0.56
HMGB2-202ENST00000438704 MAGI3Q5TCQ9 1506 aa11.57□□□□□ -0.56
HMGB2-202ENST00000438704 NKX1-1Q15270 411 aaPredicted RBP11.57□□□□□ -0.56
HMGB2-202ENST00000438704 SUPT6HQ7KZ85 1726 aaKnown RBP11.57□□□□□ -0.56
HMGB2-202ENST00000438704 NCOA2Q15596 1464 aa11.57□□□□□ -0.56
HMGB2-202ENST00000438704 HRCP23327 699 aa11.56□□□□□ -0.56
HMGB2-202ENST00000438704 DSG2Q14126 1118 aa11.56□□□□□ -0.56
HMGB2-202ENST00000438704 POTEEQ6S8J3 1075 aa11.56□□□□□ -0.56
HMGB2-202ENST00000438704 TTBK1Q5TCY1 1321 aaPredicted RBP11.56□□□□□ -0.56
HMGB2-202ENST00000438704 CDK13Q14004 1512 aaKnown RBP11.55□□□□□ -0.56
HMGB2-202ENST00000438704 CDK11AQ9UQ88 783 aaPredicted RBP11.55□□□□□ -0.56
HMGB2-202ENST00000438704 UHRF1BP1LA0JNW5 1464 aa11.55□□□□□ -0.56
HMGB2-202ENST00000438704 TROQ12816 1431 aaPredicted RBP11.54□□□□□ -0.56
HMGB2-202ENST00000438704 MYOM3Q5VTT5 1437 aa11.54□□□□□ -0.56
HMGB2-202ENST00000438704 UACAQ9BZF9 1416 aa11.54□□□□□ -0.56
HMGB2-202ENST00000438704 TBC1D12O60347 775 aa11.54□□□□□ -0.56
HMGB2-202ENST00000438704 ATP1B4Q9UN42 357 aaPredicted RBP11.54□□□□□ -0.56
HMGB2-202ENST00000438704 FGD6Q6ZV73 1430 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms