RNA–Protein interactions for RNA: ENST00000438107.1

FAM239A-202, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 5 BASIC

Gene FAM239A, Length 2,155 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-202ENST00000438107 PNISRQ8TF01 805 aaKnown RBP26.15■■□□□ 1.78
FAM239A-202ENST00000438107 TRPM1Q7Z4N2 1603 aa26.14■■□□□ 1.77
FAM239A-202ENST00000438107 HNRNPMP52272 730 aaKnown RBP eCLIP26.13■■□□□ 1.77
FAM239A-202ENST00000438107 B4GALNT3Q6L9W6 998 aa26.13■■□□□ 1.77
FAM239A-202ENST00000438107 UNC13BO14795 1591 aa26.13■■□□□ 1.77
FAM239A-202ENST00000438107 BRD4O60885 1362 aaPredicted RBP26.12■■□□□ 1.77
FAM239A-202ENST00000438107 LRPPRCP42704 1394 aaKnown RBP26.11■■□□□ 1.77
FAM239A-202ENST00000438107 RALBP1Q15311 655 aa26.1■■□□□ 1.77
FAM239A-202ENST00000438107 TMC1Q8TDI8 760 aa26.1■■□□□ 1.77
FAM239A-202ENST00000438107 SHROOM2Q13796 1616 aa26.1■■□□□ 1.77
FAM239A-202ENST00000438107 ST20-MTHFSA0A0A6YYL1 179 aa26.09■■□□□ 1.77
FAM239A-202ENST00000438107 DCAF11Q8TEB1 546 aa26.09■■□□□ 1.77
FAM239A-202ENST00000438107 LAMC1P11047 1609 aa26.09■■□□□ 1.77
FAM239A-202ENST00000438107 MYBBP1AQ9BQG0 1328 aaKnown RBP26.08■■□□□ 1.77
FAM239A-202ENST00000438107 KDM2AQ9Y2K7 1162 aa26.06■■□□□ 1.76
FAM239A-202ENST00000438107 PRAG1Q86YV5 1406 aa26.06■■□□□ 1.76
FAM239A-202ENST00000438107 PLXNC1O60486 1568 aa26.05■■□□□ 1.76
FAM239A-202ENST00000438107 CCDC144AA2RUR9 1427 aa26.05■■□□□ 1.76
FAM239A-202ENST00000438107 IQGAP3Q86VI3 1631 aa26.03■■□□□ 1.76
FAM239A-202ENST00000438107 SYCP2Q9BX26 1530 aa26.02■■□□□ 1.76
FAM239A-202ENST00000438107 GPRASP1Q5JY77 1395 aa26.02■■□□□ 1.76
FAM239A-202ENST00000438107 ERCC6L2Q5T890 1561 aa26.01■■□□□ 1.76
FAM239A-202ENST00000438107 CNGB1Q14028 1251 aaPredicted RBP26.01■■□□□ 1.75
FAM239A-202ENST00000438107 TTC37Q6PGP7 1564 aa26■■□□□ 1.75
FAM239A-202ENST00000438107 MYO5CQ9NQX4 1742 aa25.99■■□□□ 1.75
FAM239A-202ENST00000438107 PLEKHH2Q8IVE3 1493 aa25.99■■□□□ 1.75
FAM239A-202ENST00000438107 EIF2AK4Q9P2K8 1649 aaKnown RBP25.99■■□□□ 1.75
FAM239A-202ENST00000438107 ERICH6Q7L0X2 663 aa25.98■■□□□ 1.75
FAM239A-202ENST00000438107 ARHGAP5Q13017 1502 aa25.98■■□□□ 1.75
FAM239A-202ENST00000438107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.98■■□□□ 1.75
FAM239A-202ENST00000438107 PRDM15P57071 1507 aaPredicted RBP25.97■■□□□ 1.75
FAM239A-202ENST00000438107 PARD3Q8TEW0 1356 aa25.97■■□□□ 1.75
FAM239A-202ENST00000438107 PLA2R1Q13018 1463 aa25.96■■□□□ 1.75
FAM239A-202ENST00000438107 ABCC2Q92887 1545 aa25.95■■□□□ 1.74
FAM239A-202ENST00000438107 A2MP01023 1474 aa25.95■■□□□ 1.74
FAM239A-202ENST00000438107 ATP10AO60312 1499 aa25.94■■□□□ 1.74
FAM239A-202ENST00000438107 COL17A1Q9UMD9 1497 aaPredicted RBP25.93■■□□□ 1.74
FAM239A-202ENST00000438107 MAGI2Q86UL8 1455 aa25.93■■□□□ 1.74
FAM239A-202ENST00000438107 CCDC136Q96JN2 1154 aa25.93■■□□□ 1.74
FAM239A-202ENST00000438107 DUOX2Q9NRD8 1548 aa25.93■■□□□ 1.74
FAM239A-202ENST00000438107 NLRP13Q86W25 1043 aa25.92■■□□□ 1.74
FAM239A-202ENST00000438107 WASHC2CQ9Y4E1 1318 aa25.91■■□□□ 1.74
FAM239A-202ENST00000438107 CLASP1Q7Z460 1538 aa25.91■■□□□ 1.74
FAM239A-202ENST00000438107 ZMYM4Q5VZL5 1548 aa25.9■■□□□ 1.74
FAM239A-202ENST00000438107 INSRP06213 1382 aa25.9■■□□□ 1.74
FAM239A-202ENST00000438107 PDE3BQ13370 1112 aa25.88■■□□□ 1.73
FAM239A-202ENST00000438107 ERBINQ96RT1 1412 aa25.87■■□□□ 1.73
FAM239A-202ENST00000438107 PER1O15534 1290 aaPredicted RBP25.86■■□□□ 1.73
FAM239A-202ENST00000438107 RNF17Q9BXT8 1623 aaKnown RBP25.86■■□□□ 1.73
FAM239A-202ENST00000438107 NBPF1Q3BBV0 1214 aa25.84■■□□□ 1.73
FAM239A-202ENST00000438107 RGL3Q3MIN7 710 aa25.82■■□□□ 1.72
FAM239A-202ENST00000438107 TESK2Q96S53 571 aa25.82■■□□□ 1.72
FAM239A-202ENST00000438107 RRP1P56182 461 aaKnown RBP25.81■■□□□ 1.72
FAM239A-202ENST00000438107 MYT1LQ9UL68 1186 aa25.81■■□□□ 1.72
FAM239A-202ENST00000438107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.79■■□□□ 1.72
FAM239A-202ENST00000438107 DISP3Q9P2K9 1392 aa25.79■■□□□ 1.72
FAM239A-202ENST00000438107 ZCCHC11Q5TAX3 1644 aaKnown RBP25.78■■□□□ 1.72
FAM239A-202ENST00000438107 PLCH2O75038 1416 aa25.77■■□□□ 1.72
FAM239A-202ENST00000438107 BLMP54132 1417 aaPredicted RBP25.77■■□□□ 1.72
FAM239A-202ENST00000438107 UHRF1BP1LA0JNW5 1464 aa25.77■■□□□ 1.72
FAM239A-202ENST00000438107 RCAN3Q9UKA8 241 aa25.76■■□□□ 1.71
FAM239A-202ENST00000438107 TMF1P82094 1093 aa25.75■■□□□ 1.71
FAM239A-202ENST00000438107 ABCC1P33527 1531 aa25.75■■□□□ 1.71
FAM239A-202ENST00000438107 SENP3-EIF4A1A0A087X0R7 540 aa25.74■■□□□ 1.71
FAM239A-202ENST00000438107 NOP58Q9Y2X3 529 aaKnown RBP25.73■■□□□ 1.71
FAM239A-202ENST00000438107 IQGAP1P46940 1657 aa25.72■■□□□ 1.71
FAM239A-202ENST00000438107 MADDQ8WXG6 1647 aa25.71■■□□□ 1.71
FAM239A-202ENST00000438107 PANK3Q9H999 370 aa25.69■■□□□ 1.7
FAM239A-202ENST00000438107 CEP152O94986 1710 aa25.69■■□□□ 1.7
FAM239A-202ENST00000438107 SPHKAPQ2M3C7 1700 aa25.69■■□□□ 1.7
FAM239A-202ENST00000438107 EFCAB2Q5VUJ9 269 aa25.68■■□□□ 1.7
FAM239A-202ENST00000438107 ANP32AP39687 249 aaKnown RBP25.68■■□□□ 1.7
FAM239A-202ENST00000438107 TRPM2O94759 1503 aa25.66■■□□□ 1.7
FAM239A-202ENST00000438107 EXOC6Q8TAG9 804 aa25.66■■□□□ 1.7
FAM239A-202ENST00000438107 STAC3Q96MF2 364 aa25.66■■□□□ 1.7
FAM239A-202ENST00000438107 ARAP3Q8WWN8 1544 aa25.66■■□□□ 1.7
FAM239A-202ENST00000438107 CC2D1BQ5T0F9 858 aaKnown RBP25.65■■□□□ 1.7
FAM239A-202ENST00000438107 RTEL1-TNFRSF6BF6WH68 1400 aa25.65■■□□□ 1.7
FAM239A-202ENST00000438107 IPO9Q96P70 1041 aaKnown RBP25.63■■□□□ 1.69
FAM239A-202ENST00000438107 TCERG1O14776 1098 aaKnown RBP25.63■■□□□ 1.69
FAM239A-202ENST00000438107 BCL11AQ9H165 835 aa25.63■■□□□ 1.69
FAM239A-202ENST00000438107 DEPDC5O75140 1603 aa25.63■■□□□ 1.69
FAM239A-202ENST00000438107 WDR7Q9Y4E6 1490 aa25.62■■□□□ 1.69
FAM239A-202ENST00000438107 SYNMO15061 1565 aa25.62■■□□□ 1.69
FAM239A-202ENST00000438107 TRAPPC8Q9Y2L5 1435 aa25.62■■□□□ 1.69
FAM239A-202ENST00000438107 SCAPERQ9BY12 1400 aa25.61■■□□□ 1.69
FAM239A-202ENST00000438107 SALL2Q9Y467 1007 aaPredicted RBP25.61■■□□□ 1.69
FAM239A-202ENST00000438107 PTPRTO14522 1441 aa25.6■■□□□ 1.69
FAM239A-202ENST00000438107 ZFYVE16Q7Z3T8 1539 aa25.59■■□□□ 1.69
FAM239A-202ENST00000438107 TET3O43151 1660 aa25.59■■□□□ 1.69
FAM239A-202ENST00000438107 CDCA7LQ96GN5 454 aa25.58■■□□□ 1.69
FAM239A-202ENST00000438107 KIAA1210Q9ULL0 1709 aa25.58■■□□□ 1.69
FAM239A-202ENST00000438107 NEURL4Q96JN8 1562 aa25.57■■□□□ 1.68
FAM239A-202ENST00000438107 SCAF11Q99590 1463 aaKnown RBP25.57■■□□□ 1.68
FAM239A-202ENST00000438107 CDCA8Q53HL2 280 aa25.56■■□□□ 1.68
FAM239A-202ENST00000438107 CLTCL1P53675 1640 aa25.56■■□□□ 1.68
FAM239A-202ENST00000438107 PAK3O75914 559 aaPredicted RBP25.55■■□□□ 1.68
FAM239A-202ENST00000438107 MS4A1P11836 297 aa25.55■■□□□ 1.68
FAM239A-202ENST00000438107 SPAG9O60271 1321 aaKnown RBP25.54■■□□□ 1.68
FAM239A-202ENST00000438107 VWDEQ8N2E2 1590 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms