RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 IFFO2Q5TF58 517 aa14.15□□□□□ -0.14
PTCH1-209ENST00000437951 HOMER1Q86YM7 354 aa14.15□□□□□ -0.14
PTCH1-209ENST00000437951 MNS1Q8NEH6 495 aa14.15□□□□□ -0.14
PTCH1-209ENST00000437951 TSPYL1Q9H0U9 437 aa14.15□□□□□ -0.14
PTCH1-209ENST00000437951 ZNF592Q92610 1267 aa14.15□□□□□ -0.14
PTCH1-209ENST00000437951 NEXNQ0ZGT2 675 aa14.15□□□□□ -0.15
PTCH1-209ENST00000437951 ROCK2O75116 1388 aaKnown RBP14.14□□□□□ -0.15
PTCH1-209ENST00000437951 TNIKQ9UKE5 1360 aa14.14□□□□□ -0.15
PTCH1-209ENST00000437951 POGKQ9P215 609 aa14.14□□□□□ -0.15
PTCH1-209ENST00000437951 INCENPQ9NQS7 918 aa14.13□□□□□ -0.15
PTCH1-209ENST00000437951 MORC1Q86VD1 984 aa14.13□□□□□ -0.15
PTCH1-209ENST00000437951 HDGFP51858 240 aaKnown RBP14.13□□□□□ -0.15
PTCH1-209ENST00000437951 MRE11P49959 708 aa14.12□□□□□ -0.15
PTCH1-209ENST00000437951 TRIM6-TRIM34B2RNG4 842 aa14.12□□□□□ -0.15
PTCH1-209ENST00000437951 CCDC47Q96A33 483 aaKnown RBP14.12□□□□□ -0.15
PTCH1-209ENST00000437951 LETM1O95202 739 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-209ENST00000437951 GOLGA6L7A0A1B0GV03 622 aa14.12□□□□□ -0.15
PTCH1-209ENST00000437951 RRP9O43818 475 aaKnown RBP14.12□□□□□ -0.15
PTCH1-209ENST00000437951 CAGE1Q8TC20 777 aa14.11□□□□□ -0.15
PTCH1-209ENST00000437951 KCNH8Q96L42 1107 aa14.11□□□□□ -0.15
PTCH1-209ENST00000437951 FHAD1B1AJZ9 1412 aa14.11□□□□□ -0.15
PTCH1-209ENST00000437951 RGL3Q3MIN7 710 aa14.11□□□□□ -0.15
PTCH1-209ENST00000437951 EIF3AQ14152 1382 aaKnown RBP14.11□□□□□ -0.15
PTCH1-209ENST00000437951 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
PTCH1-209ENST00000437951 CAVIN1Q6NZI2 390 aaKnown RBP14.1□□□□□ -0.15
PTCH1-209ENST00000437951 CREBRFQ8IUR6 639 aa14.1□□□□□ -0.15
PTCH1-209ENST00000437951 NAT10Q9H0A0 1025 aaKnown RBP14.1□□□□□ -0.15
PTCH1-209ENST00000437951 CHMP5Q9NZZ3 219 aa14.1□□□□□ -0.15
PTCH1-209ENST00000437951 KANK1Q14678 1352 aa14.1□□□□□ -0.15
PTCH1-209ENST00000437951 PES1O00541 588 aaKnown RBP14.1□□□□□ -0.15
PTCH1-209ENST00000437951 NUCB2P80303 420 aa14.1□□□□□ -0.15
PTCH1-209ENST00000437951 CCDC173Q0VFZ6 552 aa14.09□□□□□ -0.15
PTCH1-209ENST00000437951 RB1CC1Q8TDY2 1594 aa14.09□□□□□ -0.15
PTCH1-209ENST00000437951 FAM184AQ8NB25 1140 aa14.09□□□□□ -0.15
PTCH1-209ENST00000437951 LRRFIP1Q32MZ4 808 aaKnown RBP14.09□□□□□ -0.15
PTCH1-209ENST00000437951 NACADO15069 1562 aa14.08□□□□□ -0.15
PTCH1-209ENST00000437951 CCNB3Q8WWL7 1395 aa14.08□□□□□ -0.15
PTCH1-209ENST00000437951 SPAG9O60271 1321 aaKnown RBP14.08□□□□□ -0.15
PTCH1-209ENST00000437951 PLEKHD1A6NEE1 506 aa14.08□□□□□ -0.16
PTCH1-209ENST00000437951 PDE4AP27815 886 aa14.07□□□□□ -0.16
PTCH1-209ENST00000437951 DEF6Q9H4E7 631 aa14.07□□□□□ -0.16
PTCH1-209ENST00000437951 REC8O95072 547 aa14.07□□□□□ -0.16
PTCH1-209ENST00000437951 LMOD3Q0VAK6 560 aa14.07□□□□□ -0.16
PTCH1-209ENST00000437951 CENPJQ9HC77 1338 aaPredicted RBP14.07□□□□□ -0.16
PTCH1-209ENST00000437951 STK31Q9BXU1 1019 aa14.07□□□□□ -0.16
PTCH1-209ENST00000437951 TAF7LQ5H9L4 462 aa14.06□□□□□ -0.16
PTCH1-209ENST00000437951 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.06□□□□□ -0.16
PTCH1-209ENST00000437951 IFT57Q9NWB7 429 aa14.06□□□□□ -0.16
PTCH1-209ENST00000437951 SETD5Q9C0A6 1442 aa14.06□□□□□ -0.16
PTCH1-209ENST00000437951 KIAA0754O94854 1291 aa14.06□□□□□ -0.16
PTCH1-209ENST00000437951 G3V3G9 751 aa14.05□□□□□ -0.16
PTCH1-209ENST00000437951 DCAF8Q5TAQ9 597 aa14.05□□□□□ -0.16
PTCH1-209ENST00000437951 SASS6Q6UVJ0 657 aa14.05□□□□□ -0.16
PTCH1-209ENST00000437951 GORABQ5T7V8 394 aa14.05□□□□□ -0.16
PTCH1-209ENST00000437951 AAMPQ13685 434 aa14.04□□□□□ -0.16
PTCH1-209ENST00000437951 SMC4Q9NTJ3 1288 aa14.04□□□□□ -0.16
PTCH1-209ENST00000437951 NEFHP12036 1026 aa14.04□□□□□ -0.16
PTCH1-209ENST00000437951 CFDP1Q9UEE9 299 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-209ENST00000437951 NASPP49321 788 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-209ENST00000437951 CPLX2Q6PUV4 134 aaKnown RBP14.04□□□□□ -0.16
PTCH1-209ENST00000437951 AKAP17AQ02040 695 aaKnown RBP14.03□□□□□ -0.16
PTCH1-209ENST00000437951 RUFY2Q8WXA3 655 aa14.02□□□□□ -0.16
PTCH1-209ENST00000437951 DYDC1Q8WWB3 177 aa14.02□□□□□ -0.16
PTCH1-209ENST00000437951 MARCH6O60337 910 aa14.02□□□□□ -0.17
PTCH1-209ENST00000437951 KIF7Q2M1P5 1343 aa14.02□□□□□ -0.17
PTCH1-209ENST00000437951 HDGFL2Q7Z4V5 671 aaPredicted RBP14.02□□□□□ -0.17
PTCH1-209ENST00000437951 APBB1O00213 710 aa14.01□□□□□ -0.17
PTCH1-209ENST00000437951 EIF3JO75822 258 aaKnown RBP14.01□□□□□ -0.17
PTCH1-209ENST00000437951 PDE4CQ08493 712 aa14.01□□□□□ -0.17
PTCH1-209ENST00000437951 PCMTD1Q96MG8 357 aaPredicted RBP14.01□□□□□ -0.17
PTCH1-209ENST00000437951 TRIM29Q14134 588 aa14.01□□□□□ -0.17
PTCH1-209ENST00000437951 PDCL2Q8N4E4 241 aa14.01□□□□□ -0.17
PTCH1-209ENST00000437951 CGNL1Q0VF96 1302 aa14.01□□□□□ -0.17
PTCH1-209ENST00000437951 ERCC6Q03468 1493 aa14.01□□□□□ -0.17
PTCH1-209ENST00000437951 KIF27Q86VH2 1401 aa14.01□□□□□ -0.17
PTCH1-209ENST00000437951 R3HCC1Q9Y3T6 440 aaKnown RBP14□□□□□ -0.17
PTCH1-209ENST00000437951 HSP90AB3PQ58FF7 597 aa14□□□□□ -0.17
PTCH1-209ENST00000437951 SENP3-EIF4A1A0A087X0R7 540 aa13.99□□□□□ -0.17
PTCH1-209ENST00000437951 GOLGA6L10A6NI86 522 aa13.99□□□□□ -0.17
PTCH1-209ENST00000437951 SYNE3Q6ZMZ3 975 aa13.99□□□□□ -0.17
PTCH1-209ENST00000437951 ROCK1Q13464 1354 aa13.99□□□□□ -0.17
PTCH1-209ENST00000437951 RABEP1Q15276 862 aa13.99□□□□□ -0.17
PTCH1-209ENST00000437951 TXLNBQ8N3L3 684 aa13.99□□□□□ -0.17
PTCH1-209ENST00000437951 FOXD4L1Q9NU39 408 aa13.99□□□□□ -0.17
PTCH1-209ENST00000437951 ERLIN2O94905 339 aa13.98□□□□□ -0.17
PTCH1-209ENST00000437951 NGEFQ8N5V2 710 aa13.98□□□□□ -0.17
PTCH1-209ENST00000437951 KIF15Q9NS87 1388 aa13.98□□□□□ -0.17
PTCH1-209ENST00000437951 HSPA5P11021 654 aaKnown RBP13.98□□□□□ -0.17
PTCH1-209ENST00000437951 RNF20Q5VTR2 975 aa13.98□□□□□ -0.17
PTCH1-209ENST00000437951 ARHGAP35Q9NRY4 1499 aa13.98□□□□□ -0.17
PTCH1-209ENST00000437951 MYO15BQ96JP2 1530 aa13.98□□□□□ -0.17
PTCH1-209ENST00000437951 ANKRD18AQ8IVF6 992 aa13.98□□□□□ -0.17
PTCH1-209ENST00000437951 ZKSCAN1P17029 563 aaPredicted RBP13.97□□□□□ -0.17
PTCH1-209ENST00000437951 NLRP13Q86W25 1043 aa13.97□□□□□ -0.17
PTCH1-209ENST00000437951 ZBED9Q6R2W3 1325 aa13.97□□□□□ -0.17
PTCH1-209ENST00000437951 MBD3O95983 291 aa13.97□□□□□ -0.17
PTCH1-209ENST00000437951 OLFM4Q6UX06 510 aa13.97□□□□□ -0.17
PTCH1-209ENST00000437951 ERLIN1O75477 346 aa13.97□□□□□ -0.17
PTCH1-209ENST00000437951 DCAF11Q8TEB1 546 aa13.96□□□□□ -0.17
PTCH1-209ENST00000437951 SIN3AQ96ST3 1273 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms