RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 ZNF608Q9ULD9 1512 aaPredicted RBP11.57□□□□□ -0.56
GTF2A1-202ENST00000434192 ZNF316A6NFI3 1004 aaPredicted RBP11.55□□□□□ -0.56
GTF2A1-202ENST00000434192 PTCD2Q8WV60 388 aaKnown RBP11.55□□□□□ -0.56
GTF2A1-202ENST00000434192 UPF1Q92900 1129 aaKnown RBP eCLIP11.54□□□□□ -0.56
GTF2A1-202ENST00000434192 DDX27Q96GQ7 796 aaKnown RBP11.54□□□□□ -0.56
GTF2A1-202ENST00000434192 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
GTF2A1-202ENST00000434192 LHX6Q9UPM6 363 aa11.53□□□□□ -0.56
GTF2A1-202ENST00000434192 KRTAP3-3Q9BYR6 98 aa11.52□□□□□ -0.57
GTF2A1-202ENST00000434192 KRTAP3-2Q9BYR7 98 aa11.52□□□□□ -0.57
GTF2A1-202ENST00000434192 ABCA5Q8WWZ7 1642 aa11.51□□□□□ -0.57
GTF2A1-202ENST00000434192 TBC1D12O60347 775 aa11.5□□□□□ -0.57
GTF2A1-202ENST00000434192 MFSD10Q14728 455 aa11.49□□□□□ -0.57
GTF2A1-202ENST00000434192 ZNF687Q8N1G0 1237 aa11.48□□□□□ -0.57
GTF2A1-202ENST00000434192 OXER1Q8TDS5 423 aa11.48□□□□□ -0.57
GTF2A1-202ENST00000434192 RAD54L2Q9Y4B4 1467 aa11.48□□□□□ -0.57
GTF2A1-202ENST00000434192 KDM4FA0A1W2PPD8 638 aa11.46□□□□□ -0.57
GTF2A1-202ENST00000434192 RIMBP3CA6NJZ7 1639 aa11.45□□□□□ -0.58
GTF2A1-202ENST00000434192 RIMBP3BA6NNM3 1639 aa11.45□□□□□ -0.58
GTF2A1-202ENST00000434192 RIMBP3Q9UFD9 1639 aa11.45□□□□□ -0.58
GTF2A1-202ENST00000434192 AQRO60306 1485 aaKnown RBP eCLIP11.44□□□□□ -0.582e-6■□□□□ 11.3
GTF2A1-202ENST00000434192 SOGA1O94964 1423 aa11.44□□□□□ -0.58
GTF2A1-202ENST00000434192 SPNS2Q8IVW8 549 aa11.43□□□□□ -0.58
GTF2A1-202ENST00000434192 ABCA10Q8WWZ4 1543 aa11.43□□□□□ -0.58
GTF2A1-202ENST00000434192 EMILIN3Q9NT22 766 aa11.42□□□□□ -0.58
GTF2A1-202ENST00000434192 MAGI1Q96QZ7 1491 aaPredicted RBP11.42□□□□□ -0.58
GTF2A1-202ENST00000434192 SNAPC4Q5SXM2 1469 aa11.41□□□□□ -0.58
GTF2A1-202ENST00000434192 EEA1Q15075 1411 aa11.41□□□□□ -0.58
GTF2A1-202ENST00000434192 GRIN2BQ13224 1484 aa11.39□□□□□ -0.59
GTF2A1-202ENST00000434192 ADAMTS12P58397 1594 aa11.39□□□□□ -0.59
GTF2A1-202ENST00000434192 MAP3K9P80192 1104 aa11.39□□□□□ -0.59
GTF2A1-202ENST00000434192 AXIN2Q9Y2T1 843 aa11.39□□□□□ -0.59
GTF2A1-202ENST00000434192 CLASP1Q7Z460 1538 aa11.38□□□□□ -0.59
GTF2A1-202ENST00000434192 PSDA5PKW4 1024 aaPredicted RBP11.37□□□□□ -0.59
GTF2A1-202ENST00000434192 EVI5O60447 810 aa11.37□□□□□ -0.59
GTF2A1-202ENST00000434192 TDRD9Q8NDG6 1382 aaKnown RBP11.37□□□□□ -0.59
GTF2A1-202ENST00000434192 GAPVD1Q14C86 1478 aa11.37□□□□□ -0.59
GTF2A1-202ENST00000434192 KIF27Q86VH2 1401 aa11.36□□□□□ -0.59
GTF2A1-202ENST00000434192 ARHGEF11O15085 1522 aa11.36□□□□□ -0.59
GTF2A1-202ENST00000434192 POTEEQ6S8J3 1075 aa11.36□□□□□ -0.59
GTF2A1-202ENST00000434192 CUL7Q14999 1698 aa11.36□□□□□ -0.59
GTF2A1-202ENST00000434192 MMRN1Q13201 1228 aa11.35□□□□□ -0.59
GTF2A1-202ENST00000434192 ANKRD13DQ6ZTN6 518 aa11.35□□□□□ -0.59
GTF2A1-202ENST00000434192 SYNJ2O15056 1496 aa11.35□□□□□ -0.59
GTF2A1-202ENST00000434192 PPP4R3BQ5MIZ7 849 aa11.34□□□□□ -0.59
GTF2A1-202ENST00000434192 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
GTF2A1-202ENST00000434192 CAMK2BQ13554 666 aa11.33□□□□□ -0.6
GTF2A1-202ENST00000434192 ZNF454Q8N9F8 522 aa11.33□□□□□ -0.6
GTF2A1-202ENST00000434192 KIF21BO75037 1637 aa11.33□□□□□ -0.6
GTF2A1-202ENST00000434192 ERICH3Q5RHP9 1530 aa11.33□□□□□ -0.6
GTF2A1-202ENST00000434192 RUSC2Q8N2Y8 1516 aa11.33□□□□□ -0.6
GTF2A1-202ENST00000434192 DPYSL4O14531 572 aa11.32□□□□□ -0.6
GTF2A1-202ENST00000434192 PBX2P40425 430 aa11.32□□□□□ -0.6
GTF2A1-202ENST00000434192 WDR70Q9NW82 654 aa11.32□□□□□ -0.6
GTF2A1-202ENST00000434192 LSM11P83369 360 aaKnown RBP eCLIP11.31□□□□□ -0.65e-28■■■■■ 119.6
GTF2A1-202ENST00000434192 ANO8Q9HCE9 1232 aaPredicted RBP11.31□□□□□ -0.6
GTF2A1-202ENST00000434192 ARHGAP33O14559 1287 aa11.29□□□□□ -0.6
GTF2A1-202ENST00000434192 PSEN2P49810 448 aa11.29□□□□□ -0.6
GTF2A1-202ENST00000434192 SHROOM2Q13796 1616 aa11.28□□□□□ -0.6
GTF2A1-202ENST00000434192 CEP170Q5SW79 1584 aa11.28□□□□□ -0.6
GTF2A1-202ENST00000434192 GRIN2AQ12879 1464 aa11.27□□□□□ -0.6
GTF2A1-202ENST00000434192 FOSBP53539 338 aa11.27□□□□□ -0.61
GTF2A1-202ENST00000434192 E2F4Q16254 413 aa11.26□□□□□ -0.61
GTF2A1-202ENST00000434192 FAM9AQ8IZU1 332 aaPredicted RBP11.26□□□□□ -0.61
GTF2A1-202ENST00000434192 KCNK17Q96T54 332 aa11.26□□□□□ -0.61
GTF2A1-202ENST00000434192 DMRTA1Q5VZB9 504 aa11.25□□□□□ -0.61
GTF2A1-202ENST00000434192 JPH4Q96JJ6 628 aa11.25□□□□□ -0.61
GTF2A1-202ENST00000434192 GOLGA3Q08378 1498 aa11.25□□□□□ -0.61
GTF2A1-202ENST00000434192 ARAP1Q96P48 1450 aa11.25□□□□□ -0.61
GTF2A1-202ENST00000434192 CTTNBP2Q8WZ74 1663 aa11.24□□□□□ -0.61
GTF2A1-202ENST00000434192 PRXQ9BXM0 1461 aa11.23□□□□□ -0.61
GTF2A1-202ENST00000434192 FHAD1B1AJZ9 1412 aa11.22□□□□□ -0.61
GTF2A1-202ENST00000434192 PLCB2Q00722 1185 aa11.22□□□□□ -0.61
GTF2A1-202ENST00000434192 ZDHHC16Q969W1 377 aa11.22□□□□□ -0.61
GTF2A1-202ENST00000434192 NUP160Q12769 1436 aa11.21□□□□□ -0.61
GTF2A1-202ENST00000434192 CHMP7Q8WUX9 453 aaPredicted RBP11.21□□□□□ -0.61
GTF2A1-202ENST00000434192 KCNH8Q96L42 1107 aa11.21□□□□□ -0.61
GTF2A1-202ENST00000434192 ADAM33Q9BZ11 813 aa11.21□□□□□ -0.61
GTF2A1-202ENST00000434192 BCL2L12Q9HB09 334 aa11.21□□□□□ -0.61
GTF2A1-202ENST00000434192 MYT1LQ9UL68 1186 aa11.21□□□□□ -0.61
GTF2A1-202ENST00000434192 PCDHGA10Q9Y5H3 936 aa11.21□□□□□ -0.61
GTF2A1-202ENST00000434192 ADGRD1Q6QNK2 874 aa11.2□□□□□ -0.62
GTF2A1-202ENST00000434192 RAPGEF2Q9Y4G8 1499 aa11.19□□□□□ -0.62
GTF2A1-202ENST00000434192 IGF1RP08069 1367 aa11.19□□□□□ -0.62
GTF2A1-202ENST00000434192 PTPREP23469 700 aa11.18□□□□□ -0.62
GTF2A1-202ENST00000434192 DDX12PQ92771 950 aa11.18□□□□□ -0.62
GTF2A1-202ENST00000434192 RNF166Q96A37 237 aaPredicted RBP11.18□□□□□ -0.62
GTF2A1-202ENST00000434192 CARMIL1Q5VZK9 1371 aa11.16□□□□□ -0.62
GTF2A1-202ENST00000434192 ERCC6L2Q5T890 1561 aa11.16□□□□□ -0.62
GTF2A1-202ENST00000434192 PHF14O94880 888 aa11.16□□□□□ -0.62
GTF2A1-202ENST00000434192 PTGER2P43116 358 aa11.16□□□□□ -0.62
GTF2A1-202ENST00000434192 PDIA6Q15084 440 aa11.16□□□□□ -0.62
GTF2A1-202ENST00000434192 TYW1BQ6NUM6 668 aa11.16□□□□□ -0.62
GTF2A1-202ENST00000434192 TK2O00142 265 aa11.14□□□□□ -0.63
GTF2A1-202ENST00000434192 SPDYE16A6NNV3 312 aaPredicted RBP11.13□□□□□ -0.63
GTF2A1-202ENST00000434192 FBXW7Q969H0 707 aa11.13□□□□□ -0.63
GTF2A1-202ENST00000434192 RBM33Q96EV2 1170 aaKnown RBP11.12□□□□□ -0.63
GTF2A1-202ENST00000434192 EPAS1Q99814 870 aa11.12□□□□□ -0.63
GTF2A1-202ENST00000434192 VPS9D1Q9Y2B5 631 aa11.12□□□□□ -0.63
GTF2A1-202ENST00000434192 ARIH1Q9Y4X5 557 aaPredicted RBP11.12□□□□□ -0.63
GTF2A1-202ENST00000434192 KIF13AQ9H1H9 1805 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms