RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 PPP4R2Q9NY27 417 aa25.17■■□□□ 1.62
CHD1L-204ENST00000431239 TMC1Q8TDI8 760 aa25.17■■□□□ 1.62
CHD1L-204ENST00000431239 ERCC6L2Q5T890 1561 aa25.16■■□□□ 1.62
CHD1L-204ENST00000431239 CCDC144AA2RUR9 1427 aa25.15■■□□□ 1.62
CHD1L-204ENST00000431239 ARID4BQ4LE39 1312 aaPredicted RBP25.15■■□□□ 1.62
CHD1L-204ENST00000431239 NBPF1Q3BBV0 1214 aa25.12■■□□□ 1.61
CHD1L-204ENST00000431239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.12■■□□□ 1.61
CHD1L-204ENST00000431239 RSPH4AQ5TD94 716 aa25.1■■□□□ 1.61
CHD1L-204ENST00000431239 PNISRQ8TF01 805 aaKnown RBP25.09■■□□□ 1.61
CHD1L-204ENST00000431239 PLEKHH2Q8IVE3 1493 aa25.08■■□□□ 1.61
CHD1L-204ENST00000431239 ERICH6BQ5W0A0 696 aa25.08■■□□□ 1.6
CHD1L-204ENST00000431239 PRAG1Q86YV5 1406 aa25.06■■□□□ 1.6
CHD1L-204ENST00000431239 PLA2R1Q13018 1463 aa25.05■■□□□ 1.6
CHD1L-204ENST00000431239 NUDCQ9Y266 331 aa25.05■■□□□ 1.6
CHD1L-204ENST00000431239 SMG6Q86US8 1419 aaKnown RBP25.04■■□□□ 1.6
CHD1L-204ENST00000431239 SALL2Q9Y467 1007 aaPredicted RBP25.03■■□□□ 1.6
CHD1L-204ENST00000431239 ABCC2Q92887 1545 aa25.02■■□□□ 1.6
CHD1L-204ENST00000431239 MYO5CQ9NQX4 1742 aa25.01■■□□□ 1.59
CHD1L-204ENST00000431239 A2MP01023 1474 aa25.01■■□□□ 1.59
CHD1L-204ENST00000431239 MYBBP1AQ9BQG0 1328 aaKnown RBP25.01■■□□□ 1.59
CHD1L-204ENST00000431239 SHROOM2Q13796 1616 aa25■■□□□ 1.59
CHD1L-204ENST00000431239 TRPM1Q7Z4N2 1603 aa25■■□□□ 1.59
CHD1L-204ENST00000431239 UNC13BO14795 1591 aa24.99■■□□□ 1.59
CHD1L-204ENST00000431239 MSH5O43196 834 aa24.99■■□□□ 1.59
CHD1L-204ENST00000431239 MAST1Q9Y2H9 1570 aa24.96■■□□□ 1.59
CHD1L-204ENST00000431239 RALBP1Q15311 655 aa24.96■■□□□ 1.59
CHD1L-204ENST00000431239 CC2D1BQ5T0F9 858 aaKnown RBP24.94■■□□□ 1.58
CHD1L-204ENST00000431239 E9PCH4 1651 aa24.94■■□□□ 1.58
CHD1L-204ENST00000431239 BRD4O60885 1362 aaPredicted RBP24.93■■□□□ 1.58
CHD1L-204ENST00000431239 DISP3Q9P2K9 1392 aa24.93■■□□□ 1.58
CHD1L-204ENST00000431239 PLXNC1O60486 1568 aa24.92■■□□□ 1.58
CHD1L-204ENST00000431239 IQGAP3Q86VI3 1631 aa24.92■■□□□ 1.58
CHD1L-204ENST00000431239 KTN1Q86UP2 1357 aaKnown RBP24.92■■□□□ 1.58
CHD1L-204ENST00000431239 EFCAB2Q5VUJ9 269 aa24.91■■□□□ 1.58
CHD1L-204ENST00000431239 DUOX2Q9NRD8 1548 aa24.91■■□□□ 1.58
CHD1L-204ENST00000431239 LRPPRCP42704 1394 aaKnown RBP24.9■■□□□ 1.58
CHD1L-204ENST00000431239 TRAPPC8Q9Y2L5 1435 aa24.9■■□□□ 1.58
CHD1L-204ENST00000431239 ZCCHC11Q5TAX3 1644 aaKnown RBP24.89■■□□□ 1.57
CHD1L-204ENST00000431239 TESK2Q96S53 571 aa24.89■■□□□ 1.57
CHD1L-204ENST00000431239 PLCH2O75038 1416 aa24.88■■□□□ 1.57
CHD1L-204ENST00000431239 AFAP1Q8N556 730 aa24.88■■□□□ 1.57
CHD1L-204ENST00000431239 CCDC136Q96JN2 1154 aa24.88■■□□□ 1.57
CHD1L-204ENST00000431239 NLRP13Q86W25 1043 aa24.88■■□□□ 1.57
CHD1L-204ENST00000431239 GPRASP1Q5JY77 1395 aa24.87■■□□□ 1.57
CHD1L-204ENST00000431239 PER1O15534 1290 aaPredicted RBP24.86■■□□□ 1.57
CHD1L-204ENST00000431239 PANK3Q9H999 370 aa24.86■■□□□ 1.57
CHD1L-204ENST00000431239 COL17A1Q9UMD9 1497 aaPredicted RBP24.85■■□□□ 1.57
CHD1L-204ENST00000431239 FANCIQ9NVI1 1328 aa24.85■■□□□ 1.57
CHD1L-204ENST00000431239 PARD3Q8TEW0 1356 aa24.85■■□□□ 1.57
CHD1L-204ENST00000431239 ERBINQ96RT1 1412 aa24.85■■□□□ 1.57
CHD1L-204ENST00000431239 PRDM15P57071 1507 aaPredicted RBP24.84■■□□□ 1.57
CHD1L-204ENST00000431239 RNF123Q5XPI4 1314 aa24.84■■□□□ 1.57
CHD1L-204ENST00000431239 SPAG9O60271 1321 aaKnown RBP24.83■■□□□ 1.56
CHD1L-204ENST00000431239 MYT1LQ9UL68 1186 aa24.82■■□□□ 1.56
CHD1L-204ENST00000431239 ABCC1P33527 1531 aa24.81■■□□□ 1.56
CHD1L-204ENST00000431239 TMF1P82094 1093 aa24.81■■□□□ 1.56
CHD1L-204ENST00000431239 MAGI2Q86UL8 1455 aa24.8■■□□□ 1.56
CHD1L-204ENST00000431239 ERICH6Q7L0X2 663 aa24.79■■□□□ 1.56
CHD1L-204ENST00000431239 EIF2AK4Q9P2K8 1649 aaKnown RBP24.78■■□□□ 1.56
CHD1L-204ENST00000431239 CDCA7LQ96GN5 454 aa24.76■■□□□ 1.55
CHD1L-204ENST00000431239 ATP10AO60312 1499 aa24.75■■□□□ 1.55
CHD1L-204ENST00000431239 LAMC1P11047 1609 aa24.73■■□□□ 1.55
CHD1L-204ENST00000431239 RRP1P56182 461 aaKnown RBP24.73■■□□□ 1.55
CHD1L-204ENST00000431239 RCAN3Q9UKA8 241 aa24.73■■□□□ 1.55
CHD1L-204ENST00000431239 CLASP1Q7Z460 1538 aa24.73■■□□□ 1.55
CHD1L-204ENST00000431239 EXOC6Q8TAG9 804 aa24.7■■□□□ 1.54
CHD1L-204ENST00000431239 UHRF1BP1LA0JNW5 1464 aa24.7■■□□□ 1.54
CHD1L-204ENST00000431239 ZFYVE16Q7Z3T8 1539 aa24.69■■□□□ 1.54
CHD1L-204ENST00000431239 KIF3BO15066 747 aa24.68■■□□□ 1.54
CHD1L-204ENST00000431239 RNF17Q9BXT8 1623 aaKnown RBP24.67■■□□□ 1.54
CHD1L-204ENST00000431239 MADDQ8WXG6 1647 aa24.66■■□□□ 1.54
CHD1L-204ENST00000431239 KNSTRNQ9Y448 316 aa24.65■■□□□ 1.54
CHD1L-204ENST00000431239 WASHC2CQ9Y4E1 1318 aa24.64■■□□□ 1.54
CHD1L-204ENST00000431239 PLIN1O60240 522 aa24.64■■□□□ 1.54
CHD1L-204ENST00000431239 CLTCL1P53675 1640 aa24.63■■□□□ 1.53
CHD1L-204ENST00000431239 SCAPERQ9BY12 1400 aa24.63■■□□□ 1.53
CHD1L-204ENST00000431239 TRPM2O94759 1503 aa24.63■■□□□ 1.53
CHD1L-204ENST00000431239 FANCAO15360 1455 aa24.62■■□□□ 1.53
CHD1L-204ENST00000431239 WDR7Q9Y4E6 1490 aa24.61■■□□□ 1.53
CHD1L-204ENST00000431239 SPHKAPQ2M3C7 1700 aa24.61■■□□□ 1.53
CHD1L-204ENST00000431239 ADAMTS8Q9UP79 889 aa24.61■■□□□ 1.53
CHD1L-204ENST00000431239 PDE3BQ13370 1112 aa24.6■■□□□ 1.53
CHD1L-204ENST00000431239 RTEL1-TNFRSF6BF6WH68 1400 aa24.6■■□□□ 1.53
CHD1L-204ENST00000431239 ATP7AQ04656 1500 aa24.59■■□□□ 1.53
CHD1L-204ENST00000431239 KANK1Q14678 1352 aa24.58■■□□□ 1.53
CHD1L-204ENST00000431239 BLMP54132 1417 aaPredicted RBP24.58■■□□□ 1.53
CHD1L-204ENST00000431239 UGGT1Q9NYU2 1555 aa24.58■■□□□ 1.52
CHD1L-204ENST00000431239 CEP152O94986 1710 aa24.57■■□□□ 1.52
CHD1L-204ENST00000431239 IQGAP1P46940 1657 aa24.57■■□□□ 1.52
CHD1L-204ENST00000431239 PPP2R1AP30153 589 aa24.56■■□□□ 1.52
CHD1L-204ENST00000431239 SCAF11Q99590 1463 aaKnown RBP24.56■■□□□ 1.52
CHD1L-204ENST00000431239 ADGRL1O94910 1474 aa24.56■■□□□ 1.52
CHD1L-204ENST00000431239 PTPRTO14522 1441 aa24.56■■□□□ 1.52
CHD1L-204ENST00000431239 CFAP70Q5T0N1 1121 aa24.55■■□□□ 1.52
CHD1L-204ENST00000431239 WDR43Q15061 677 aaKnown RBP eCLIP24.54■■□□□ 1.52
CHD1L-204ENST00000431239 AMER1Q5JTC6 1135 aaPredicted RBP24.54■■□□□ 1.52
CHD1L-204ENST00000431239 TET3O43151 1660 aa24.53■■□□□ 1.52
CHD1L-204ENST00000431239 DEPDC5O75140 1603 aa24.52■■□□□ 1.52
CHD1L-204ENST00000431239 ARAP3Q8WWN8 1544 aa24.51■■□□□ 1.51
CHD1L-204ENST00000431239 INO80Q9ULG1 1556 aaPredicted RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms