RNA–Protein interactions for RNA: ENST00000431051.5

PSMD1-204, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 1 (best)

Gene PSMD1, Length 2,506 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-204ENST00000431051 CCDC144AA2RUR9 1427 aa20.57■□□□□ 0.88
PSMD1-204ENST00000431051 SHROOM2Q13796 1616 aa20.57■□□□□ 0.88
PSMD1-204ENST00000431051 ABCC2Q92887 1545 aa20.56■□□□□ 0.88
PSMD1-204ENST00000431051 RBM19Q9Y4C8 960 aaKnown RBP20.56■□□□□ 0.88
PSMD1-204ENST00000431051 PLEKHH2Q8IVE3 1493 aa20.55■□□□□ 0.88
PSMD1-204ENST00000431051 NBPF1Q3BBV0 1214 aa20.53■□□□□ 0.88
PSMD1-204ENST00000431051 PLA2R1Q13018 1463 aa20.52■□□□□ 0.88
PSMD1-204ENST00000431051 TMC1Q8TDI8 760 aa20.51■□□□□ 0.87
PSMD1-204ENST00000431051 MYO5CQ9NQX4 1742 aa20.5■□□□□ 0.87
PSMD1-204ENST00000431051 PRAG1Q86YV5 1406 aa20.5■□□□□ 0.87
PSMD1-204ENST00000431051 MAST1Q9Y2H9 1570 aa20.48■□□□□ 0.87
PSMD1-204ENST00000431051 MYT1Q01538 1121 aa20.48■□□□□ 0.87
PSMD1-204ENST00000431051 PNISRQ8TF01 805 aaKnown RBP20.48■□□□□ 0.87
PSMD1-204ENST00000431051 UNC13BO14795 1591 aa20.48■□□□□ 0.87
PSMD1-204ENST00000431051 PPP4R2Q9NY27 417 aa20.47■□□□□ 0.87
PSMD1-204ENST00000431051 EFCAB2Q5VUJ9 269 aa20.46■□□□□ 0.87
PSMD1-204ENST00000431051 A2MP01023 1474 aa20.46■□□□□ 0.87
PSMD1-204ENST00000431051 B4GALNT3Q6L9W6 998 aa20.46■□□□□ 0.87
PSMD1-204ENST00000431051 PLCH2O75038 1416 aa20.44■□□□□ 0.86
PSMD1-204ENST00000431051 PLXNC1O60486 1568 aa20.44■□□□□ 0.86
PSMD1-204ENST00000431051 ERICH6BQ5W0A0 696 aa20.44■□□□□ 0.86
PSMD1-204ENST00000431051 TRPM1Q7Z4N2 1603 aa20.43■□□□□ 0.86
PSMD1-204ENST00000431051 ZCCHC11Q5TAX3 1644 aaKnown RBP20.43■□□□□ 0.86
PSMD1-204ENST00000431051 TRAPPC8Q9Y2L5 1435 aa20.43■□□□□ 0.86
PSMD1-204ENST00000431051 DUOX2Q9NRD8 1548 aa20.42■□□□□ 0.86
PSMD1-204ENST00000431051 IQGAP3Q86VI3 1631 aa20.41■□□□□ 0.86
PSMD1-204ENST00000431051 MYBBP1AQ9BQG0 1328 aaKnown RBP20.41■□□□□ 0.86
PSMD1-204ENST00000431051 AFAP1Q8N556 730 aa20.41■□□□□ 0.86
PSMD1-204ENST00000431051 SMG6Q86US8 1419 aaKnown RBP20.4■□□□□ 0.86
PSMD1-204ENST00000431051 NUDCQ9Y266 331 aa20.4■□□□□ 0.86
PSMD1-204ENST00000431051 ERBINQ96RT1 1412 aa20.39■□□□□ 0.85
PSMD1-204ENST00000431051 RALBP1Q15311 655 aa20.38■□□□□ 0.85
PSMD1-204ENST00000431051 DISP3Q9P2K9 1392 aa20.37■□□□□ 0.85
PSMD1-204ENST00000431051 CLASP1Q7Z460 1538 aa20.37■□□□□ 0.85
PSMD1-204ENST00000431051 SPAG9O60271 1321 aaKnown RBP20.36■□□□□ 0.85
PSMD1-204ENST00000431051 GPRASP1Q5JY77 1395 aa20.36■□□□□ 0.85
PSMD1-204ENST00000431051 ABCC1P33527 1531 aa20.36■□□□□ 0.85
PSMD1-204ENST00000431051 TESK2Q96S53 571 aa20.35■□□□□ 0.85
PSMD1-204ENST00000431051 BRD4O60885 1362 aaPredicted RBP20.35■□□□□ 0.85
PSMD1-204ENST00000431051 E9PCH4 1651 aa20.35■□□□□ 0.85
PSMD1-204ENST00000431051 SALL2Q9Y467 1007 aaPredicted RBP20.35■□□□□ 0.85
PSMD1-204ENST00000431051 MAGI2Q86UL8 1455 aa20.34■□□□□ 0.85
PSMD1-204ENST00000431051 ANP32EQ9BTT0 268 aa20.34■□□□□ 0.85
PSMD1-204ENST00000431051 CC2D1BQ5T0F9 858 aaKnown RBP20.34■□□□□ 0.85
PSMD1-204ENST00000431051 KTN1Q86UP2 1357 aaKnown RBP20.34■□□□□ 0.85
PSMD1-204ENST00000431051 UHRF1BP1LA0JNW5 1464 aa20.33■□□□□ 0.85
PSMD1-204ENST00000431051 LRPPRCP42704 1394 aaKnown RBP20.33■□□□□ 0.84
PSMD1-204ENST00000431051 PER1O15534 1290 aaPredicted RBP20.32■□□□□ 0.84
PSMD1-204ENST00000431051 ATP10AO60312 1499 aa20.31■□□□□ 0.84
PSMD1-204ENST00000431051 PRDM15P57071 1507 aaPredicted RBP20.31■□□□□ 0.84
PSMD1-204ENST00000431051 COL17A1Q9UMD9 1497 aaPredicted RBP20.31■□□□□ 0.84
PSMD1-204ENST00000431051 NLRP13Q86W25 1043 aa20.3■□□□□ 0.84
PSMD1-204ENST00000431051 PANK3Q9H999 370 aa20.3■□□□□ 0.84
PSMD1-204ENST00000431051 MYT1LQ9UL68 1186 aa20.3■□□□□ 0.84
PSMD1-204ENST00000431051 PARD3Q8TEW0 1356 aa20.3■□□□□ 0.84
PSMD1-204ENST00000431051 TMF1P82094 1093 aa20.28■□□□□ 0.84
PSMD1-204ENST00000431051 EIF2AK4Q9P2K8 1649 aaKnown RBP20.26■□□□□ 0.83
PSMD1-204ENST00000431051 RNF123Q5XPI4 1314 aa20.25■□□□□ 0.83
PSMD1-204ENST00000431051 ZFYVE16Q7Z3T8 1539 aa20.25■□□□□ 0.83
PSMD1-204ENST00000431051 MSH5O43196 834 aa20.24■□□□□ 0.83
PSMD1-204ENST00000431051 LAMC1P11047 1609 aa20.24■□□□□ 0.83
PSMD1-204ENST00000431051 KIF3BO15066 747 aa20.22■□□□□ 0.83
PSMD1-204ENST00000431051 CCDC136Q96JN2 1154 aa20.22■□□□□ 0.83
PSMD1-204ENST00000431051 FANCAO15360 1455 aa20.21■□□□□ 0.83
PSMD1-204ENST00000431051 WDR7Q9Y4E6 1490 aa20.21■□□□□ 0.83
PSMD1-204ENST00000431051 RTEL1-TNFRSF6BF6WH68 1400 aa20.21■□□□□ 0.83
PSMD1-204ENST00000431051 SCAPERQ9BY12 1400 aa20.2■□□□□ 0.82
PSMD1-204ENST00000431051 TRPM2O94759 1503 aa20.18■□□□□ 0.82
PSMD1-204ENST00000431051 MADDQ8WXG6 1647 aa20.17■□□□□ 0.82
PSMD1-204ENST00000431051 RNF17Q9BXT8 1623 aaKnown RBP20.17■□□□□ 0.82
PSMD1-204ENST00000431051 FANCIQ9NVI1 1328 aa20.17■□□□□ 0.82
PSMD1-204ENST00000431051 WASHC2CQ9Y4E1 1318 aa20.17■□□□□ 0.82
PSMD1-204ENST00000431051 CDCA7LQ96GN5 454 aa20.17■□□□□ 0.82
PSMD1-204ENST00000431051 ATP7AQ04656 1500 aa20.16■□□□□ 0.82
PSMD1-204ENST00000431051 ARAP3Q8WWN8 1544 aa20.16■□□□□ 0.82
PSMD1-204ENST00000431051 CLTCL1P53675 1640 aa20.16■□□□□ 0.82
PSMD1-204ENST00000431051 KANK1Q14678 1352 aa20.15■□□□□ 0.82
PSMD1-204ENST00000431051 ADGRL1O94910 1474 aa20.15■□□□□ 0.82
PSMD1-204ENST00000431051 PTPRTO14522 1441 aa20.15■□□□□ 0.82
PSMD1-204ENST00000431051 RCAN3Q9UKA8 241 aa20.14■□□□□ 0.82
PSMD1-204ENST00000431051 SPHKAPQ2M3C7 1700 aa20.14■□□□□ 0.81
PSMD1-204ENST00000431051 RRP1P56182 461 aaKnown RBP20.13■□□□□ 0.81
PSMD1-204ENST00000431051 KNSTRNQ9Y448 316 aa20.13■□□□□ 0.81
PSMD1-204ENST00000431051 DEPDC5O75140 1603 aa20.11■□□□□ 0.81
PSMD1-204ENST00000431051 ABCA9Q8IUA7 1624 aa20.11■□□□□ 0.81
PSMD1-204ENST00000431051 INO80Q9ULG1 1556 aaPredicted RBP20.11■□□□□ 0.81
PSMD1-204ENST00000431051 CEP152O94986 1710 aa20.11■□□□□ 0.81
PSMD1-204ENST00000431051 ASXL2Q76L83 1435 aa20.11■□□□□ 0.81
PSMD1-204ENST00000431051 UGGT1Q9NYU2 1555 aa20.1■□□□□ 0.81
PSMD1-204ENST00000431051 SCAF11Q99590 1463 aaKnown RBP20.1■□□□□ 0.81
PSMD1-204ENST00000431051 TET3O43151 1660 aa20.1■□□□□ 0.81
PSMD1-204ENST00000431051 EXOC6Q8TAG9 804 aa20.09■□□□□ 0.81
PSMD1-204ENST00000431051 IQGAP1P46940 1657 aa20.09■□□□□ 0.81
PSMD1-204ENST00000431051 CFAP70Q5T0N1 1121 aa20.09■□□□□ 0.81
PSMD1-204ENST00000431051 PDE3BQ13370 1112 aa20.08■□□□□ 0.81
PSMD1-204ENST00000431051 ADAMTS8Q9UP79 889 aa20.08■□□□□ 0.81
PSMD1-204ENST00000431051 PPP2R1AP30153 589 aa20.06■□□□□ 0.8
PSMD1-204ENST00000431051 AMER1Q5JTC6 1135 aaPredicted RBP20.06■□□□□ 0.8
PSMD1-204ENST00000431051 BLMP54132 1417 aaPredicted RBP20.06■□□□□ 0.8
PSMD1-204ENST00000431051 ADGRF5Q8IZF2 1346 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms