RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 CTDP1Q9Y5B0 961 aaPredicted RBP7.47□□□□□ -1.21
UBR3-204ENST00000430321 KIAA1211Q6ZU35 1233 aa7.47□□□□□ -1.21
UBR3-204ENST00000430321 KIF3AQ9Y496 699 aa7.47□□□□□ -1.21
UBR3-204ENST00000430321 FHOD3Q2V2M9 1422 aa7.47□□□□□ -1.21
UBR3-204ENST00000430321 HNRNPMP52272 730 aaKnown RBP eCLIP7.47□□□□□ -1.216e-7■■■■■ 33.7
UBR3-204ENST00000430321 ANKLE2Q86XL3 938 aa7.46□□□□□ -1.21
UBR3-204ENST00000430321 HECW1Q76N89 1606 aa7.46□□□□□ -1.21
UBR3-204ENST00000430321 RPGRIP1LQ68CZ1 1315 aa7.46□□□□□ -1.22
UBR3-204ENST00000430321 DDX58O95786 925 aaKnown RBP7.46□□□□□ -1.22
UBR3-204ENST00000430321 ERICH3Q5RHP9 1530 aa7.46□□□□□ -1.22
UBR3-204ENST00000430321 DAPK1P53355 1430 aa7.46□□□□□ -1.22
UBR3-204ENST00000430321 MPHOSPH9Q99550 1183 aa7.45□□□□□ -1.22
UBR3-204ENST00000430321 ISY1Q9ULR0 285 aaKnown RBP7.45□□□□□ -1.22
UBR3-204ENST00000430321 AKNAQ7Z591 1439 aa7.45□□□□□ -1.22
UBR3-204ENST00000430321 KIAA2012Q0VF49 1180 aa7.45□□□□□ -1.22
UBR3-204ENST00000430321 NEXNQ0ZGT2 675 aa7.45□□□□□ -1.22
UBR3-204ENST00000430321 LRPPRCP42704 1394 aaKnown RBP7.45□□□□□ -1.22
UBR3-204ENST00000430321 CWC22Q9HCG8 908 aaKnown RBP7.44□□□□□ -1.22
UBR3-204ENST00000430321 PRDM2Q13029 1718 aa7.44□□□□□ -1.22
UBR3-204ENST00000430321 GNL2Q13823 731 aaKnown RBP7.44□□□□□ -1.22
UBR3-204ENST00000430321 SLC52A1Q9NWF4 448 aa7.44□□□□□ -1.22
UBR3-204ENST00000430321 MSH5O43196 834 aa7.44□□□□□ -1.22
UBR3-204ENST00000430321 CUL7Q14999 1698 aa7.43□□□□□ -1.22
UBR3-204ENST00000430321 NCOA2Q15596 1464 aa7.43□□□□□ -1.22
UBR3-204ENST00000430321 PLB1Q6P1J6 1458 aa7.43□□□□□ -1.22
UBR3-204ENST00000430321 WDHD1O75717 1129 aaPredicted RBP7.43□□□□□ -1.22
UBR3-204ENST00000430321 EHBP1L1Q8N3D4 1523 aa7.43□□□□□ -1.22
UBR3-204ENST00000430321 PROSER2Q86WR7 435 aaPredicted RBP7.42□□□□□ -1.22
UBR3-204ENST00000430321 RAPGEF4Q8WZA2 1011 aa7.42□□□□□ -1.22
UBR3-204ENST00000430321 CASKIN1Q8WXD9 1431 aa7.42□□□□□ -1.22
UBR3-204ENST00000430321 TEFQ10587 303 aa7.42□□□□□ -1.22
UBR3-204ENST00000430321 CSPP1Q1MSJ5 1256 aa7.42□□□□□ -1.22
UBR3-204ENST00000430321 HFM1A2PYH4 1435 aa7.42□□□□□ -1.22
UBR3-204ENST00000430321 TOPBP1Q92547 1522 aa7.42□□□□□ -1.22
UBR3-204ENST00000430321 GOLGA6L4A6NEF3 574 aa7.42□□□□□ -1.22
UBR3-204ENST00000430321 FRAT2O75474 233 aaPredicted RBP7.42□□□□□ -1.22
UBR3-204ENST00000430321 KIAA0586Q9BVV6 1533 aa7.42□□□□□ -1.22
UBR3-204ENST00000430321 SNAPC4Q5SXM2 1469 aa7.42□□□□□ -1.22
UBR3-204ENST00000430321 HSP90AB1P08238 724 aaKnown RBP7.41□□□□□ -1.22
UBR3-204ENST00000430321 CCER2I3L3R5 266 aa7.41□□□□□ -1.22
UBR3-204ENST00000430321 SALL2Q9Y467 1007 aaPredicted RBP7.41□□□□□ -1.22
UBR3-204ENST00000430321 U2AF1L5P0DN76 240 aaPredicted RBP7.41□□□□□ -1.22
UBR3-204ENST00000430321 U2AF1Q01081 240 aaKnown RBP eCLIP7.41□□□□□ -1.222e-6■■■■□ 19.7
UBR3-204ENST00000430321 PDE3BQ13370 1112 aa7.41□□□□□ -1.22
UBR3-204ENST00000430321 USP35Q9P2H5 1018 aa7.41□□□□□ -1.22
UBR3-204ENST00000430321 TRIM44Q96DX7 344 aaPredicted RBP7.4□□□□□ -1.22
UBR3-204ENST00000430321 TPM4P67936 248 aa7.4□□□□□ -1.22
UBR3-204ENST00000430321 PMFBP1Q8TBY8 1022 aa7.4□□□□□ -1.22
UBR3-204ENST00000430321 RWDD1Q9H446 243 aaPredicted RBP7.4□□□□□ -1.22
UBR3-204ENST00000430321 CLSTN1O94985 981 aa7.4□□□□□ -1.23
UBR3-204ENST00000430321 SAFB2Q14151 953 aaKnown RBP eCLIP7.4□□□□□ -1.23
UBR3-204ENST00000430321 KRI1Q8N9T8 703 aaKnown RBP7.4□□□□□ -1.23
UBR3-204ENST00000430321 AQRO60306 1485 aaKnown RBP eCLIP7.4□□□□□ -1.23
UBR3-204ENST00000430321 CC2D1BQ5T0F9 858 aaKnown RBP7.4□□□□□ -1.23
UBR3-204ENST00000430321 RBM33Q96EV2 1170 aaKnown RBP7.4□□□□□ -1.23
UBR3-204ENST00000430321 SENP3Q9H4L4 574 aaPredicted RBP7.4□□□□□ -1.23
UBR3-204ENST00000430321 SOX12O15370 315 aa7.39□□□□□ -1.23
UBR3-204ENST00000430321 ZNF330Q9Y3S2 320 aaPredicted RBP7.39□□□□□ -1.23
UBR3-204ENST00000430321 ERICH6BQ5W0A0 696 aa7.39□□□□□ -1.23
UBR3-204ENST00000430321 IGF1RP08069 1367 aa7.39□□□□□ -1.23
UBR3-204ENST00000430321 KIF15Q9NS87 1388 aa7.39□□□□□ -1.23
UBR3-204ENST00000430321 ZNF692Q9BU19 519 aaPredicted RBP7.39□□□□□ -1.23
UBR3-204ENST00000430321 HSP90AB4PQ58FF6 505 aa7.39□□□□□ -1.23
UBR3-204ENST00000430321 TCEAL9Q9UHQ7 104 aa7.39□□□□□ -1.23
UBR3-204ENST00000430321 PNISRQ8TF01 805 aaKnown RBP7.38□□□□□ -1.23
UBR3-204ENST00000430321 EPRSP07814 1512 aaKnown RBP7.38□□□□□ -1.23
UBR3-204ENST00000430321 NEUROD2Q15784 382 aa7.38□□□□□ -1.23
UBR3-204ENST00000430321 TNNT2P45379 298 aaPredicted RBP7.38□□□□□ -1.23
UBR3-204ENST00000430321 TXNDC2Q86VQ3 553 aa7.38□□□□□ -1.23
UBR3-204ENST00000430321 RAD54L2Q9Y4B4 1467 aa7.37□□□□□ -1.23
UBR3-204ENST00000430321 NAP1L2Q9ULW6 460 aaPredicted RBP7.37□□□□□ -1.23
UBR3-204ENST00000430321 CHMP3Q9Y3E7 222 aa7.37□□□□□ -1.23
UBR3-204ENST00000430321 ANKRD30BQ9BXX2 1392 aa7.37□□□□□ -1.23
UBR3-204ENST00000430321 FKBP8Q14318 412 aa7.37□□□□□ -1.23
UBR3-204ENST00000430321 SYNE3Q6ZMZ3 975 aa7.37□□□□□ -1.23
UBR3-204ENST00000430321 TROQ12816 1431 aaPredicted RBP7.36□□□□□ -1.23
UBR3-204ENST00000430321 AAMPQ13685 434 aa7.36□□□□□ -1.23
UBR3-204ENST00000430321 PLEKHO1Q53GL0 409 aaPredicted RBP7.36□□□□□ -1.23
UBR3-204ENST00000430321 FRAT1Q92837 279 aaPredicted RBP7.36□□□□□ -1.23
UBR3-204ENST00000430321 CENPJQ9HC77 1338 aaPredicted RBP7.36□□□□□ -1.23
UBR3-204ENST00000430321 CPLX2Q6PUV4 134 aaKnown RBP7.36□□□□□ -1.23
UBR3-204ENST00000430321 HSCBQ8IWL3 235 aa7.36□□□□□ -1.23
UBR3-204ENST00000430321 NLRP13Q86W25 1043 aa7.35□□□□□ -1.23
UBR3-204ENST00000430321 CCDC47Q96A33 483 aaKnown RBP7.35□□□□□ -1.23
UBR3-204ENST00000430321 MARCH6O60337 910 aa7.35□□□□□ -1.23
UBR3-204ENST00000430321 GAS2L2Q8NHY3 880 aa7.35□□□□□ -1.23
UBR3-204ENST00000430321 SPG7Q9UQ90 795 aa7.35□□□□□ -1.23
UBR3-204ENST00000430321 ABCA10Q8WWZ4 1543 aa7.35□□□□□ -1.23
UBR3-204ENST00000430321 TATP17735 454 aaPredicted RBP7.35□□□□□ -1.23
UBR3-204ENST00000430321 MFAP1P55081 439 aaKnown RBP7.35□□□□□ -1.23
UBR3-204ENST00000430321 KIF6Q6ZMV9 814 aa7.35□□□□□ -1.23
UBR3-204ENST00000430321 AKAP17AQ02040 695 aaKnown RBP7.34□□□□□ -1.23
UBR3-204ENST00000430321 CD109Q6YHK3 1445 aa7.34□□□□□ -1.23
UBR3-204ENST00000430321 TOP2BQ02880 1626 aa7.34□□□□□ -1.23
UBR3-204ENST00000430321 VPS37DQ86XT2 251 aa7.34□□□□□ -1.23
UBR3-204ENST00000430321 RUFY2Q8WXA3 655 aa7.34□□□□□ -1.23
UBR3-204ENST00000430321 CCDC7Q96M83 1385 aa7.34□□□□□ -1.23
UBR3-204ENST00000430321 C11orf95C9JLR9 678 aaPredicted RBP7.34□□□□□ -1.23
UBR3-204ENST00000430321 IQGAP2Q13576 1575 aa7.34□□□□□ -1.24
UBR3-204ENST00000430321 KCNH5Q8NCM2 988 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 768 ms