RNA–Protein interactions for RNA: ENST00000425793.1

NEK2P4-201, Transcript of NEK2 pseudogene 4, humanhuman

BASIC

Gene NEK2P4, Length 1,329 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2P4-201ENST00000425793 PPARGC1BQ86YN6 1023 aaKnown RBP10.54□□□□□ -0.72
NEK2P4-201ENST00000425793 CUX2O14529 1486 aa10.53□□□□□ -0.72
NEK2P4-201ENST00000425793 ZEB1P37275 1124 aaPredicted RBP10.53□□□□□ -0.72
NEK2P4-201ENST00000425793 RBM26Q5T8P6 1007 aaKnown RBP10.53□□□□□ -0.72
NEK2P4-201ENST00000425793 OXER1Q8TDS5 423 aa10.53□□□□□ -0.72
NEK2P4-201ENST00000425793 DNMBPQ6XZF7 1577 aa10.52□□□□□ -0.73
NEK2P4-201ENST00000425793 LAMC3Q9Y6N6 1575 aa10.52□□□□□ -0.73
NEK2P4-201ENST00000425793 ZMYND10O75800 440 aa10.5□□□□□ -0.73
NEK2P4-201ENST00000425793 IGF1RP08069 1367 aa10.49□□□□□ -0.73
NEK2P4-201ENST00000425793 MAP3K9P80192 1104 aa10.49□□□□□ -0.73
NEK2P4-201ENST00000425793 UPF1Q92900 1129 aaKnown RBP eCLIP10.49□□□□□ -0.73
NEK2P4-201ENST00000425793 NESP48681 1621 aa10.49□□□□□ -0.73
NEK2P4-201ENST00000425793 TOPBP1Q92547 1522 aa10.48□□□□□ -0.73
NEK2P4-201ENST00000425793 C3orf67Q6ZVT6 689 aa10.47□□□□□ -0.73
NEK2P4-201ENST00000425793 ABCA10Q8WWZ4 1543 aa10.47□□□□□ -0.73
NEK2P4-201ENST00000425793 POLA1P09884 1462 aaPredicted RBP10.46□□□□□ -0.74
NEK2P4-201ENST00000425793 ARAP1Q96P48 1450 aa10.46□□□□□ -0.74
NEK2P4-201ENST00000425793 BARGINQ6ZT62 677 aa10.45□□□□□ -0.74
NEK2P4-201ENST00000425793 PTCD2Q8WV60 388 aaKnown RBP10.45□□□□□ -0.74
NEK2P4-201ENST00000425793 SLC24A3Q9HC58 644 aa10.45□□□□□ -0.74
NEK2P4-201ENST00000425793 PDS5BQ9NTI5 1447 aa10.44□□□□□ -0.74
NEK2P4-201ENST00000425793 CARMIL1Q5VZK9 1371 aa10.44□□□□□ -0.74
NEK2P4-201ENST00000425793 SLC34A2O95436 690 aa10.43□□□□□ -0.74
NEK2P4-201ENST00000425793 PTGER2P43116 358 aa10.43□□□□□ -0.74
NEK2P4-201ENST00000425793 URB2Q14146 1524 aaKnown RBP10.43□□□□□ -0.74
NEK2P4-201ENST00000425793 GPIHBP1Q8IV16 184 aa10.42□□□□□ -0.74
NEK2P4-201ENST00000425793 RAD54L2Q9Y4B4 1467 aa10.41□□□□□ -0.74
NEK2P4-201ENST00000425793 GRXCR2A6NFK2 248 aa10.41□□□□□ -0.74
NEK2P4-201ENST00000425793 GPR37O15354 613 aa10.41□□□□□ -0.74
NEK2P4-201ENST00000425793 OSBPP22059 807 aa10.41□□□□□ -0.74
NEK2P4-201ENST00000425793 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.41□□□□□ -0.74
NEK2P4-201ENST00000425793 TTBK1Q5TCY1 1321 aaPredicted RBP10.41□□□□□ -0.74
NEK2P4-201ENST00000425793 ARHGAP35Q9NRY4 1499 aa10.41□□□□□ -0.74
NEK2P4-201ENST00000425793 EVI5O60447 810 aa10.4□□□□□ -0.74
NEK2P4-201ENST00000425793 TBC1D12O60347 775 aa10.39□□□□□ -0.75
NEK2P4-201ENST00000425793 RANGAP1P46060 587 aaPredicted RBP10.39□□□□□ -0.75
NEK2P4-201ENST00000425793 BRPF1P55201 1214 aaPredicted RBP10.39□□□□□ -0.75
NEK2P4-201ENST00000425793 PRIM1P49642 420 aaKnown RBP10.38□□□□□ -0.75
NEK2P4-201ENST00000425793 SLAIN1Q8ND83 568 aa10.38□□□□□ -0.75
NEK2P4-201ENST00000425793 DDX12PQ92771 950 aa10.38□□□□□ -0.75
NEK2P4-201ENST00000425793 ANO8Q9HCE9 1232 aaPredicted RBP10.38□□□□□ -0.75
NEK2P4-201ENST00000425793 WDR97A6NE52 1622 aa10.36□□□□□ -0.75
NEK2P4-201ENST00000425793 CUL7Q14999 1698 aa10.36□□□□□ -0.75
NEK2P4-201ENST00000425793 ABCA5Q8WWZ7 1642 aa10.34□□□□□ -0.75
NEK2P4-201ENST00000425793 KDM4FA0A1W2PPD8 638 aa10.33□□□□□ -0.76
NEK2P4-201ENST00000425793 CCER1Q8TC90 406 aaPredicted RBP10.33□□□□□ -0.76
NEK2P4-201ENST00000425793 PCDHGA4Q9Y5G9 962 aa10.32□□□□□ -0.76
NEK2P4-201ENST00000425793 MRC2Q9UBG0 1479 aa10.31□□□□□ -0.76
NEK2P4-201ENST00000425793 MAP3K1Q13233 1512 aa10.31□□□□□ -0.76
NEK2P4-201ENST00000425793 KIF21AQ7Z4S6 1674 aa10.31□□□□□ -0.76
NEK2P4-201ENST00000425793 EFCAB5A4FU69 1503 aa10.31□□□□□ -0.76
NEK2P4-201ENST00000425793 GAPVD1Q14C86 1478 aa10.31□□□□□ -0.76
NEK2P4-201ENST00000425793 AK7Q96M32 723 aa10.31□□□□□ -0.76
NEK2P4-201ENST00000425793 NUTM2FA1L443 756 aa10.3□□□□□ -0.76
NEK2P4-201ENST00000425793 TMEM132AQ24JP5 1023 aa10.3□□□□□ -0.76
NEK2P4-201ENST00000425793 FHAD1B1AJZ9 1412 aa10.29□□□□□ -0.76
NEK2P4-201ENST00000425793 TDRD9Q8NDG6 1382 aaKnown RBP10.29□□□□□ -0.76
NEK2P4-201ENST00000425793 KRI1Q8N9T8 703 aaKnown RBP10.29□□□□□ -0.76
NEK2P4-201ENST00000425793 TARBP1Q13395 1621 aaKnown RBP10.28□□□□□ -0.76
NEK2P4-201ENST00000425793 HOXB3P14651 431 aaPredicted RBP10.28□□□□□ -0.76
NEK2P4-201ENST00000425793 NEUROD2Q15784 382 aa10.28□□□□□ -0.76
NEK2P4-201ENST00000425793 KANK4Q5T7N3 995 aaPredicted RBP10.28□□□□□ -0.76
NEK2P4-201ENST00000425793 RRBP1Q9P2E9 1410 aaKnown RBP10.27□□□□□ -0.77
NEK2P4-201ENST00000425793 TIAM1Q13009 1591 aa10.26□□□□□ -0.77
NEK2P4-201ENST00000425793 TRIM66O15016 1216 aa10.26□□□□□ -0.77
NEK2P4-201ENST00000425793 PHF14O94880 888 aa10.26□□□□□ -0.77
NEK2P4-201ENST00000425793 FECHP22830 423 aa10.26□□□□□ -0.77
NEK2P4-201ENST00000425793 FAM163AQ96GL9 167 aaPredicted RBP10.26□□□□□ -0.77
NEK2P4-201ENST00000425793 PCDHGA10Q9Y5H3 936 aa10.26□□□□□ -0.77
NEK2P4-201ENST00000425793 ZNF316A6NFI3 1004 aaPredicted RBP10.25□□□□□ -0.77
NEK2P4-201ENST00000425793 SNPHO15079 494 aa10.25□□□□□ -0.77
NEK2P4-201ENST00000425793 GNPATO15228 680 aa10.25□□□□□ -0.77
NEK2P4-201ENST00000425793 PTGDRQ13258 359 aa10.25□□□□□ -0.77
NEK2P4-201ENST00000425793 AQRO60306 1485 aaKnown RBP eCLIP10.25□□□□□ -0.77
NEK2P4-201ENST00000425793 WDR62O43379 1518 aa10.24□□□□□ -0.77
NEK2P4-201ENST00000425793 FCHSD2O94868 740 aa10.24□□□□□ -0.77
NEK2P4-201ENST00000425793 HIC1Q14526 733 aa10.24□□□□□ -0.77
NEK2P4-201ENST00000425793 NPDC1Q9NQX5 325 aaPredicted RBP10.24□□□□□ -0.77
NEK2P4-201ENST00000425793 MINK1Q8N4C8 1332 aaPredicted RBP10.23□□□□□ -0.77
NEK2P4-201ENST00000425793 FYCO1Q9BQS8 1478 aa10.23□□□□□ -0.77
NEK2P4-201ENST00000425793 EN1Q05925 392 aaPredicted RBP10.23□□□□□ -0.77
NEK2P4-201ENST00000425793 EPAS1Q99814 870 aa10.23□□□□□ -0.77
NEK2P4-201ENST00000425793 FHOD3Q2V2M9 1422 aa10.23□□□□□ -0.77
NEK2P4-201ENST00000425793 CASKIN1Q8WXD9 1431 aa10.23□□□□□ -0.77
NEK2P4-201ENST00000425793 PCF11O94913 1555 aaKnown RBP10.23□□□□□ -0.77
NEK2P4-201ENST00000425793 CTTNBP2Q8WZ74 1663 aa10.23□□□□□ -0.77
NEK2P4-201ENST00000425793 IFT140Q96RY7 1462 aa10.22□□□□□ -0.77
NEK2P4-201ENST00000425793 IRF6O14896 467 aa10.22□□□□□ -0.77
NEK2P4-201ENST00000425793 MAP2K5Q13163 448 aa10.22□□□□□ -0.77
NEK2P4-201ENST00000425793 KHSRPQ92945 711 aaKnown RBP eCLIP10.22□□□□□ -0.77
NEK2P4-201ENST00000425793 CDHR5Q9HBB8 845 aa10.22□□□□□ -0.77
NEK2P4-201ENST00000425793 LRRC9Q6ZRR7 1453 aa10.21□□□□□ -0.77
NEK2P4-201ENST00000425793 LCE2DQ5TA82 110 aaPredicted RBP10.21□□□□□ -0.78
NEK2P4-201ENST00000425793 GPR153Q6NV75 609 aa10.21□□□□□ -0.78
NEK2P4-201ENST00000425793 GPBP1L1Q9HC44 474 aaPredicted RBP10.21□□□□□ -0.78
NEK2P4-201ENST00000425793 CCNB3Q8WWL7 1395 aa10.21□□□□□ -0.78
NEK2P4-201ENST00000425793 SAMD9Q5K651 1589 aa10.2□□□□□ -0.78
NEK2P4-201ENST00000425793 CFAP43Q8NDM7 1665 aa10.2□□□□□ -0.78
NEK2P4-201ENST00000425793 FMN1Q68DA7 1419 aa10.2□□□□□ -0.78
NEK2P4-201ENST00000425793 PDE4DQ08499 809 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms