RNA–Protein interactions for RNA: ENST00000424320.5

SGIP1-205, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-205ENST00000424320 DDX27Q96GQ7 796 aaKnown RBP13.81□□□□□ -0.2
SGIP1-205ENST00000424320 PPP1R3GB7ZBB8 358 aa13.8□□□□□ -0.2
SGIP1-205ENST00000424320 LARP6Q9BRS8 491 aaKnown RBP13.8□□□□□ -0.2
SGIP1-205ENST00000424320 MAP3K9P80192 1104 aa13.79□□□□□ -0.2
SGIP1-205ENST00000424320 MFSD10Q14728 455 aa13.79□□□□□ -0.2
SGIP1-205ENST00000424320 RABGEF1Q9UJ41 708 aa13.79□□□□□ -0.2
SGIP1-205ENST00000424320 GTPBP6O43824 516 aaPredicted RBP13.76□□□□□ -0.21
SGIP1-205ENST00000424320 ITGBL1O95965 494 aaPredicted RBP13.76□□□□□ -0.21
SGIP1-205ENST00000424320 PCDHGA10Q9Y5H3 936 aa13.76□□□□□ -0.21
SGIP1-205ENST00000424320 CC2D2AQ9P2K1 1620 aa13.75□□□□□ -0.21
SGIP1-205ENST00000424320 CECR2Q9BXF3 1484 aa13.74□□□□□ -0.21
SGIP1-205ENST00000424320 ANKK1Q8NFD2 765 aa13.74□□□□□ -0.21
SGIP1-205ENST00000424320 PROX2Q3B8N5 592 aa13.73□□□□□ -0.21
SGIP1-205ENST00000424320 EMILIN3Q9NT22 766 aa13.73□□□□□ -0.21
SGIP1-205ENST00000424320 EIF4G1Q04637 1599 aaKnown RBP13.72□□□□□ -0.21
SGIP1-205ENST00000424320 COL9A1P20849 921 aa13.72□□□□□ -0.21
SGIP1-205ENST00000424320 LAPTM4BQ86VI4 370 aa13.71□□□□□ -0.21
SGIP1-205ENST00000424320 FBXW7Q969H0 707 aa13.71□□□□□ -0.21
SGIP1-205ENST00000424320 TYW1BQ6NUM6 668 aa13.69□□□□□ -0.22
SGIP1-205ENST00000424320 SOWAHBA6NEL2 793 aa13.67□□□□□ -0.22
SGIP1-205ENST00000424320 PHF14O94880 888 aa13.67□□□□□ -0.22
SGIP1-205ENST00000424320 BCAMP50895 628 aa13.67□□□□□ -0.22
SGIP1-205ENST00000424320 NYAP1Q6ZVC0 841 aa13.67□□□□□ -0.22
SGIP1-205ENST00000424320 ONECUT3O60422 494 aaPredicted RBP13.64□□□□□ -0.23
SGIP1-205ENST00000424320 ZFRQ96KR1 1074 aaKnown RBP13.63□□□□□ -0.23
SGIP1-205ENST00000424320 KIAA1468Q9P260 1216 aa13.62□□□□□ -0.23
SGIP1-205ENST00000424320 C6orf132Q5T0Z8 1188 aa13.58□□□□□ -0.24
SGIP1-205ENST00000424320 EPAS1Q99814 870 aa13.58□□□□□ -0.24
SGIP1-205ENST00000424320 WBP1LQ9NX94 342 aa13.58□□□□□ -0.24
SGIP1-205ENST00000424320 KCNC4Q03721 635 aa13.56□□□□□ -0.24
SGIP1-205ENST00000424320 CADPS2Q86UW7 1296 aa13.56□□□□□ -0.24
SGIP1-205ENST00000424320 TRIM6-TRIM34B2RNG4 842 aa13.54□□□□□ -0.24
SGIP1-205ENST00000424320 CAMK2BQ13554 666 aa13.54□□□□□ -0.24
SGIP1-205ENST00000424320 SEPT9Q9UHD8 586 aaPredicted RBP13.54□□□□□ -0.24
SGIP1-205ENST00000424320 FAM98CQ17RN3 349 aaKnown RBP13.53□□□□□ -0.24
SGIP1-205ENST00000424320 Q6ZNB5 142 aa13.52□□□□□ -0.25
SGIP1-205ENST00000424320 TSR3Q9UJK0 312 aaKnown RBP13.5□□□□□ -0.25
SGIP1-205ENST00000424320 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.49□□□□□ -0.25
SGIP1-205ENST00000424320 DPYSL4O14531 572 aa13.48□□□□□ -0.25
SGIP1-205ENST00000424320 LRCH3Q96II8 777 aa13.48□□□□□ -0.25
SGIP1-205ENST00000424320 HPS5Q9UPZ3 1129 aa13.47□□□□□ -0.25
SGIP1-205ENST00000424320 RBM33Q96EV2 1170 aaKnown RBP13.45□□□□□ -0.26
SGIP1-205ENST00000424320 LAPTM4AQ15012 233 aa13.43□□□□□ -0.26
SGIP1-205ENST00000424320 DDX12PQ92771 950 aa13.41□□□□□ -0.26
SGIP1-205ENST00000424320 TSKSQ9UJT2 592 aa13.4□□□□□ -0.26
SGIP1-205ENST00000424320 EN1Q05925 392 aaPredicted RBP13.39□□□□□ -0.27
SGIP1-205ENST00000424320 PACS2Q86VP3 889 aa13.39□□□□□ -0.27
SGIP1-205ENST00000424320 LCE2BO14633 110 aa13.35□□□□□ -0.27
SGIP1-205ENST00000424320 PPP4CP60510 307 aa13.35□□□□□ -0.27
SGIP1-205ENST00000424320 NBR1Q14596 966 aa13.35□□□□□ -0.27
SGIP1-205ENST00000424320 TSR1Q2NL82 804 aaKnown RBP13.35□□□□□ -0.27
SGIP1-205ENST00000424320 TJAP1Q5JTD0 557 aa13.34□□□□□ -0.27
SGIP1-205ENST00000424320 MAP3K7O43318 606 aa13.33□□□□□ -0.28
SGIP1-205ENST00000424320 PDIA6Q15084 440 aa13.33□□□□□ -0.28
SGIP1-205ENST00000424320 GFRA3O60609 400 aa13.32□□□□□ -0.28
SGIP1-205ENST00000424320 TRAF7Q6Q0C0 670 aa13.29□□□□□ -0.28
SGIP1-205ENST00000424320 SAMD7Q7Z3H4 446 aa13.29□□□□□ -0.28
SGIP1-205ENST00000424320 CDCA7LQ96GN5 454 aa13.29□□□□□ -0.28
SGIP1-205ENST00000424320 ATAD2BQ9ULI0 1458 aa13.28□□□□□ -0.28
SGIP1-205ENST00000424320 SMARCA4P51532 1647 aa13.28□□□□□ -0.28
SGIP1-205ENST00000424320 SPDYE16A6NNV3 312 aaPredicted RBP13.27□□□□□ -0.29
SGIP1-205ENST00000424320 PRSS12P56730 875 aa13.27□□□□□ -0.29
SGIP1-205ENST00000424320 NCAPD3P42695 1498 aa13.26□□□□□ -0.29
SGIP1-205ENST00000424320 ERCC6Q03468 1493 aa13.26□□□□□ -0.29
SGIP1-205ENST00000424320 MTRQ99707 1265 aa13.26□□□□□ -0.29
SGIP1-205ENST00000424320 PRKD2Q9BZL6 878 aa13.26□□□□□ -0.29
SGIP1-205ENST00000424320 FAM198AQ9UFP1 575 aa13.26□□□□□ -0.29
SGIP1-205ENST00000424320 SMARCA2P51531 1590 aa13.25□□□□□ -0.29
SGIP1-205ENST00000424320 SMAPO00193 183 aa13.25□□□□□ -0.29
SGIP1-205ENST00000424320 CERKQ8TCT0 537 aa13.25□□□□□ -0.29
SGIP1-205ENST00000424320 IL21Q9HBE4 155 aa13.25□□□□□ -0.29
SGIP1-205ENST00000424320 NRG2O14511 850 aaPredicted RBP13.24□□□□□ -0.29
SGIP1-205ENST00000424320 V9GY48 417 aaPredicted RBP13.24□□□□□ -0.29
SGIP1-205ENST00000424320 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
SGIP1-205ENST00000424320 PPP1R18Q6NYC8 613 aa13.22□□□□□ -0.29
SGIP1-205ENST00000424320 TATDN2Q93075 761 aa13.22□□□□□ -0.29
SGIP1-205ENST00000424320 BAZ1BQ9UIG0 1483 aaKnown RBP13.22□□□□□ -0.29
SGIP1-205ENST00000424320 NBPF26B4DH59 902 aa13.21□□□□□ -0.29
SGIP1-205ENST00000424320 C3orf80F5H4A9 247 aa13.21□□□□□ -0.29
SGIP1-205ENST00000424320 PRIM1P49642 420 aaKnown RBP13.2□□□□□ -0.3
SGIP1-205ENST00000424320 PNMA3Q9UL41 463 aa13.18□□□□□ -0.3
SGIP1-205ENST00000424320 HMGXB3Q12766 1538 aa13.18□□□□□ -0.3
SGIP1-205ENST00000424320 ZNF516Q92618 1163 aa13.17□□□□□ -0.3
SGIP1-205ENST00000424320 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.17□□□□□ -0.3
SGIP1-205ENST00000424320 ARIH1Q9Y4X5 557 aaPredicted RBP13.15□□□□□ -0.3
SGIP1-205ENST00000424320 MROH2BQ7Z745 1585 aa13.15□□□□□ -0.3
SGIP1-205ENST00000424320 APLP1P51693 650 aa13.14□□□□□ -0.31
SGIP1-205ENST00000424320 RBM27Q9P2N5 1060 aaKnown RBP13.14□□□□□ -0.31
SGIP1-205ENST00000424320 HDGFP51858 240 aaKnown RBP13.12□□□□□ -0.31
SGIP1-205ENST00000424320 NUDT18Q6ZVK8 323 aa13.12□□□□□ -0.31
SGIP1-205ENST00000424320 BBXQ8WY36 941 aaPredicted RBP13.12□□□□□ -0.31
SGIP1-205ENST00000424320 NESP48681 1621 aa13.12□□□□□ -0.31
SGIP1-205ENST00000424320 GRXCR2A6NFK2 248 aa13.11□□□□□ -0.31
SGIP1-205ENST00000424320 RNF40O75150 1001 aa13.1□□□□□ -0.31
SGIP1-205ENST00000424320 E2F4Q16254 413 aa13.1□□□□□ -0.31
SGIP1-205ENST00000424320 NECTIN2Q92692 538 aa13.1□□□□□ -0.31
SGIP1-205ENST00000424320 CDHR5Q9HBB8 845 aa13.1□□□□□ -0.31
SGIP1-205ENST00000424320 OSBPP22059 807 aa13.09□□□□□ -0.31
SGIP1-205ENST00000424320 NKX2-3Q8TAU0 364 aa13.08□□□□□ -0.32
SGIP1-205ENST00000424320 CUX2O14529 1486 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms