RNA–Protein interactions for RNA: ENST00000424320.5

SGIP1-205, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-205ENST00000424320 AEBP2Q6ZN18 517 aaPredicted RBP34.67■■■■□ 3.14
SGIP1-205ENST00000424320 CHIC1Q5VXU3 224 aa32.62■■■□□ 2.81
SGIP1-205ENST00000424320 SENP3Q9H4L4 574 aaPredicted RBP29.64■■■□□ 2.34
SGIP1-205ENST00000424320 PHF23Q9BUL5 403 aaPredicted RBP29.19■■■□□ 2.26
SGIP1-205ENST00000424320 FOXD1Q16676 465 aa27.66■■■□□ 2.02
SGIP1-205ENST00000424320 MSH5O43196 834 aa26.03■■□□□ 1.76
SGIP1-205ENST00000424320 POTEDQ86YR6 584 aa25.95■■□□□ 1.74
SGIP1-205ENST00000424320 PLPPR3Q6T4P5 718 aa25.91■■□□□ 1.74
SGIP1-205ENST00000424320 PIAS4Q8N2W9 510 aaPredicted RBP25.75■■□□□ 1.71
SGIP1-205ENST00000424320 PPP6R1Q9UPN7 881 aa25.59■■□□□ 1.69
SGIP1-205ENST00000424320 ADRA2BP18089 450 aa25.47■■□□□ 1.67
SGIP1-205ENST00000424320 MAPK8IP2Q13387 824 aaPredicted RBP23.49■■□□□ 1.35
SGIP1-205ENST00000424320 DMRT2Q9Y5R5 561 aa23.46■■□□□ 1.35
SGIP1-205ENST00000424320 SCAF1Q9H7N4 1312 aaKnown RBP23.35■■□□□ 1.33
SGIP1-205ENST00000424320 PPP4R3CPQ6ZMV5 832 aa22.66■■□□□ 1.22
SGIP1-205ENST00000424320 CACNB1Q02641 598 aaPredicted RBP22.5■■□□□ 1.19
SGIP1-205ENST00000424320 HOXD11P31277 338 aaPredicted RBP22.49■■□□□ 1.19
SGIP1-205ENST00000424320 DCAF8L1A6NGE4 600 aa22.43■■□□□ 1.18
SGIP1-205ENST00000424320 CNKSR2Q8WXI2 1034 aa22.33■■□□□ 1.17
SGIP1-205ENST00000424320 RNF216Q9NWF9 866 aaPredicted RBP22.22■■□□□ 1.15
SGIP1-205ENST00000424320 RNF39Q9H2S5 420 aa22.18■■□□□ 1.14
SGIP1-205ENST00000424320 C1QBPQ07021 282 aaKnown RBP21.84■■□□□ 1.09
SGIP1-205ENST00000424320 DNAJC5BQ9UF47 199 aa21.82■■□□□ 1.08
SGIP1-205ENST00000424320 NCBP3Q53F19 620 aaKnown RBP21.7■■□□□ 1.06
SGIP1-205ENST00000424320 NPM3O75607 178 aaKnown RBP21.37■■□□□ 1.01
SGIP1-205ENST00000424320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.36■■□□□ 1.01
SGIP1-205ENST00000424320 U3KPZ7 1027 aaPredicted RBP20.91■□□□□ 0.94
SGIP1-205ENST00000424320 SPINK5Q9NQ38 1064 aaPredicted RBP20.68■□□□□ 0.9
SGIP1-205ENST00000424320 CAPN15O75808 1086 aa20.65■□□□□ 0.9
SGIP1-205ENST00000424320 KCNA4P22459 653 aa20.65■□□□□ 0.9
SGIP1-205ENST00000424320 DSG3P32926 999 aa20.65■□□□□ 0.9
SGIP1-205ENST00000424320 SLC4A2P04920 1241 aa20.5■□□□□ 0.87
SGIP1-205ENST00000424320 APLP2Q06481 763 aa20.32■□□□□ 0.84
SGIP1-205ENST00000424320 POTEHQ6S545 545 aa20.27■□□□□ 0.84
SGIP1-205ENST00000424320 TRHP20396 242 aaPredicted RBP20.23■□□□□ 0.83
SGIP1-205ENST00000424320 ZNF219Q9P2Y4 722 aaPredicted RBP20.23■□□□□ 0.83
SGIP1-205ENST00000424320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.21■□□□□ 0.83
SGIP1-205ENST00000424320 HNRNPUL2Q1KMD3 747 aaKnown RBP20.21■□□□□ 0.83
SGIP1-205ENST00000424320 ABCB7O75027 752 aa20.14■□□□□ 0.81
SGIP1-205ENST00000424320 SAMD1Q6SPF0 538 aaPredicted RBP20.07■□□□□ 0.8
SGIP1-205ENST00000424320 MYCNP04198 464 aaPredicted RBP19.79■□□□□ 0.76
SGIP1-205ENST00000424320 RBM42Q9BTD8 480 aaKnown RBP19.72■□□□□ 0.75
SGIP1-205ENST00000424320 POLA2Q14181 598 aa19.64■□□□□ 0.73
SGIP1-205ENST00000424320 SLC4A1APQ9BWU0 796 aaKnown RBP19.43■□□□□ 0.7
SGIP1-205ENST00000424320 CHRDL2Q6WN34 429 aa19.4■□□□□ 0.7
SGIP1-205ENST00000424320 FOXD4L1Q9NU39 408 aa19.4■□□□□ 0.7
SGIP1-205ENST00000424320 ATF5Q9Y2D1 282 aaPredicted RBP19.33■□□□□ 0.68
SGIP1-205ENST00000424320 ZBTB12Q9Y330 459 aaPredicted RBP19.25■□□□□ 0.67
SGIP1-205ENST00000424320 AKT1S1Q96B36 256 aa19.19■□□□□ 0.66
SGIP1-205ENST00000424320 OSCARQ8IYS5 282 aa19.02■□□□□ 0.64
SGIP1-205ENST00000424320 REM2Q8IYK8 340 aaPredicted RBP19■□□□□ 0.63
SGIP1-205ENST00000424320 ZBTB22O15209 634 aa18.99■□□□□ 0.63
SGIP1-205ENST00000424320 ATXN8OSP0DMR3 200 aa18.87■□□□□ 0.61
SGIP1-205ENST00000424320 PIP4P2Q8N4L2 257 aa18.87■□□□□ 0.61
SGIP1-205ENST00000424320 SP7Q8TDD2 431 aaPredicted RBP18.86■□□□□ 0.61
SGIP1-205ENST00000424320 PITPNM1O00562 1244 aa18.8■□□□□ 0.6
SGIP1-205ENST00000424320 FXR2P51116 673 aaKnown RBP eCLIP18.73■□□□□ 0.59
SGIP1-205ENST00000424320 SPDYE2BA6NHP3 402 aa18.62■□□□□ 0.57
SGIP1-205ENST00000424320 SPDYE6P0CI01 402 aa18.62■□□□□ 0.57
SGIP1-205ENST00000424320 SPDYE2Q495Y8 402 aa18.62■□□□□ 0.57
SGIP1-205ENST00000424320 FBLN2P98095 1184 aa18.61■□□□□ 0.57
SGIP1-205ENST00000424320 HAX1O00165 279 aa18.59■□□□□ 0.57
SGIP1-205ENST00000424320 MKRN4PQ13434 485 aaPredicted RBP18.44■□□□□ 0.54
SGIP1-205ENST00000424320 SPDYE1Q8NFV5 336 aaPredicted RBP18.36■□□□□ 0.53
SGIP1-205ENST00000424320 EVX2Q03828 476 aa18.35■□□□□ 0.53
SGIP1-205ENST00000424320 SSUH2Q9Y2M2 353 aa18.35■□□□□ 0.53
SGIP1-205ENST00000424320 ZNF692Q9BU19 519 aaPredicted RBP18.31■□□□□ 0.52
SGIP1-205ENST00000424320 CLEC11AQ9Y240 323 aa18.31■□□□□ 0.52
SGIP1-205ENST00000424320 PRKAR2AP13861 404 aaKnown RBP18.3■□□□□ 0.52
SGIP1-205ENST00000424320 C19orf67A6NJJ6 358 aa18.14■□□□□ 0.49
SGIP1-205ENST00000424320 PABPN1Q86U42 306 aaKnown RBP eCLIP18.03■□□□□ 0.48
SGIP1-205ENST00000424320 CHADLQ6NUI6 762 aa18.01■□□□□ 0.47
SGIP1-205ENST00000424320 PRR29P0C7W0 189 aa17.98■□□□□ 0.47
SGIP1-205ENST00000424320 GABBR2O75899 941 aa17.93■□□□□ 0.46
SGIP1-205ENST00000424320 CSRNP3Q8WYN3 585 aa17.81■□□□□ 0.44
SGIP1-205ENST00000424320 FARP1Q9Y4F1 1045 aaPredicted RBP17.73■□□□□ 0.43
SGIP1-205ENST00000424320 CD44P16070 742 aaKnown RBP17.7■□□□□ 0.42
SGIP1-205ENST00000424320 LHX8Q68G74 356 aa17.66■□□□□ 0.42
SGIP1-205ENST00000424320 CLCN6P51797 869 aa17.59■□□□□ 0.41
SGIP1-205ENST00000424320 POTEIP0CG38 1075 aa17.55■□□□□ 0.4
SGIP1-205ENST00000424320 STAG3Q9UJ98 1225 aa17.5■□□□□ 0.39
SGIP1-205ENST00000424320 CREBZFQ9NS37 354 aa17.48■□□□□ 0.39
SGIP1-205ENST00000424320 ZNF579Q8NAF0 562 aaKnown RBP17.45■□□□□ 0.38
SGIP1-205ENST00000424320 SPDYE4A6NLX3 237 aa17.39■□□□□ 0.37
SGIP1-205ENST00000424320 ZRANB1Q9UGI0 708 aa17.39■□□□□ 0.37
SGIP1-205ENST00000424320 DCBLD2Q96PD2 775 aa17.36■□□□□ 0.37
SGIP1-205ENST00000424320 EHMT2Q96KQ7 1210 aa17.35■□□□□ 0.37
SGIP1-205ENST00000424320 GALR2O43603 387 aaPredicted RBP17.22■□□□□ 0.35
SGIP1-205ENST00000424320 PAK3O75914 559 aaPredicted RBP17.19■□□□□ 0.34
SGIP1-205ENST00000424320 MNX1P50219 401 aaPredicted RBP17.16■□□□□ 0.34
SGIP1-205ENST00000424320 NPM1P06748 294 aaKnown RBP eCLIP17.14■□□□□ 0.33
SGIP1-205ENST00000424320 PHF12Q96QT6 1004 aa17.12■□□□□ 0.33
SGIP1-205ENST00000424320 NISCHQ9Y2I1 1504 aa17.02■□□□□ 0.32
SGIP1-205ENST00000424320 PROM2Q8N271 834 aa16.98■□□□□ 0.31
SGIP1-205ENST00000424320 OTUD5Q96G74 571 aa16.97■□□□□ 0.31
SGIP1-205ENST00000424320 POTEB2H3BUK9 544 aa16.96■□□□□ 0.31
SGIP1-205ENST00000424320 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
SGIP1-205ENST00000424320 MS4A3Q96HJ5 214 aa16.89■□□□□ 0.29
SGIP1-205ENST00000424320 ASTLQ6HA08 431 aaPredicted RBP16.88■□□□□ 0.29
SGIP1-205ENST00000424320 ATMINO43313 823 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms