RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 PTPRKQ15262 1439 aa8.22□□□□□ -1.09
CHD2-202ENST00000420239 NCOA1Q15788 1441 aa8.22□□□□□ -1.09
CHD2-202ENST00000420239 SMG6Q86US8 1419 aaKnown RBP8.21□□□□□ -1.09
CHD2-202ENST00000420239 CHADLQ6NUI6 762 aa8.21□□□□□ -1.09
CHD2-202ENST00000420239 USP35Q9P2H5 1018 aa8.21□□□□□ -1.09
CHD2-202ENST00000420239 GCC2Q8IWJ2 1684 aa8.21□□□□□ -1.1
CHD2-202ENST00000420239 C14orf37Q86TY3 774 aa8.21□□□□□ -1.1
CHD2-202ENST00000420239 ARXQ96QS3 562 aa8.21□□□□□ -1.1
CHD2-202ENST00000420239 PPP1R37O75864 691 aa8.2□□□□□ -1.1
CHD2-202ENST00000420239 HSPA5P11021 654 aaKnown RBP8.2□□□□□ -1.1
CHD2-202ENST00000420239 FAM9BQ8IZU0 186 aa8.2□□□□□ -1.1
CHD2-202ENST00000420239 PRKRIP1Q9H875 184 aaPredicted RBP8.2□□□□□ -1.1
CHD2-202ENST00000420239 FMN1Q68DA7 1419 aa8.19□□□□□ -1.1
CHD2-202ENST00000420239 EIF5BO60841 1220 aaKnown RBP8.19□□□□□ -1.1
CHD2-202ENST00000420239 PKNOX2Q96KN3 472 aa8.19□□□□□ -1.1
CHD2-202ENST00000420239 CCDC7Q96M83 1385 aa8.19□□□□□ -1.1
CHD2-202ENST00000420239 DENND4BO75064 1496 aaPredicted RBP8.19□□□□□ -1.1
CHD2-202ENST00000420239 PSEN1P49768 467 aa8.18□□□□□ -1.1
CHD2-202ENST00000420239 SNAPC4Q5SXM2 1469 aa8.18□□□□□ -1.1
CHD2-202ENST00000420239 NPM2Q86SE8 214 aaKnown RBP8.18□□□□□ -1.1
CHD2-202ENST00000420239 THOC2Q8NI27 1593 aaKnown RBP8.18□□□□□ -1.1
CHD2-202ENST00000420239 ZC3H15Q8WU90 426 aaKnown RBP8.18□□□□□ -1.1
CHD2-202ENST00000420239 CTTNBP2Q8WZ74 1663 aa8.18□□□□□ -1.1
CHD2-202ENST00000420239 ARHGEF11O15085 1522 aa8.18□□□□□ -1.1
CHD2-202ENST00000420239 ARHGEF1Q92888 912 aaKnown RBP8.18□□□□□ -1.1
CHD2-202ENST00000420239 MRS2Q9HD23 443 aa8.18□□□□□ -1.1
CHD2-202ENST00000420239 EIF4G2P78344 907 aaKnown RBP eCLIP8.17□□□□□ -1.1
CHD2-202ENST00000420239 CC2D2AQ9P2K1 1620 aa8.17□□□□□ -1.1
CHD2-202ENST00000420239 SEMA3EO15041 775 aa8.17□□□□□ -1.1
CHD2-202ENST00000420239 CCDC61Q9Y6R9 512 aa8.17□□□□□ -1.1
CHD2-202ENST00000420239 TCOF1Q13428 1488 aaKnown RBP8.16□□□□□ -1.1
CHD2-202ENST00000420239 FHOD3Q2V2M9 1422 aa8.16□□□□□ -1.1
CHD2-202ENST00000420239 MYOM3Q5VTT5 1437 aa8.16□□□□□ -1.1
CHD2-202ENST00000420239 LRRIQ1Q96JM4 1722 aa8.16□□□□□ -1.1
CHD2-202ENST00000420239 NUDCQ9Y266 331 aa8.16□□□□□ -1.1
CHD2-202ENST00000420239 SUPT6HQ7KZ85 1726 aaKnown RBP8.16□□□□□ -1.1
CHD2-202ENST00000420239 PPM1GO15355 546 aaPredicted RBP8.15□□□□□ -1.1
CHD2-202ENST00000420239 E2F4Q16254 413 aa8.15□□□□□ -1.1
CHD2-202ENST00000420239 CUL7Q14999 1698 aa8.15□□□□□ -1.1
CHD2-202ENST00000420239 SPATA31E1Q6ZUB1 1445 aa8.15□□□□□ -1.1
CHD2-202ENST00000420239 FBXO22Q8NEZ5 403 aa8.15□□□□□ -1.1
CHD2-202ENST00000420239 FARP1Q9Y4F1 1045 aaPredicted RBP8.15□□□□□ -1.1
CHD2-202ENST00000420239 EHBP1L1Q8N3D4 1523 aa8.14□□□□□ -1.11
CHD2-202ENST00000420239 UGGT2Q9NYU1 1516 aa8.14□□□□□ -1.11
CHD2-202ENST00000420239 SLC24A3Q9HC58 644 aa8.14□□□□□ -1.11
CHD2-202ENST00000420239 SAMD9Q5K651 1589 aa8.14□□□□□ -1.11
CHD2-202ENST00000420239 TESPA1A2RU30 521 aaPredicted RBP8.14□□□□□ -1.11
CHD2-202ENST00000420239 ZNF579Q8NAF0 562 aaKnown RBP8.14□□□□□ -1.11
CHD2-202ENST00000420239 FRAT1Q92837 279 aaPredicted RBP8.14□□□□□ -1.11
CHD2-202ENST00000420239 GRIN2BQ13224 1484 aa8.13□□□□□ -1.11
CHD2-202ENST00000420239 PDE4AP27815 886 aa8.13□□□□□ -1.11
CHD2-202ENST00000420239 NEUROD2Q15784 382 aa8.13□□□□□ -1.11
CHD2-202ENST00000420239 KIF21AQ7Z4S6 1674 aa8.13□□□□□ -1.11
CHD2-202ENST00000420239 EFCAB3Q8N7B9 438 aa8.13□□□□□ -1.11
CHD2-202ENST00000420239 RSPH6AQ9H0K4 717 aa8.13□□□□□ -1.11
CHD2-202ENST00000420239 TCERG1O14776 1098 aaKnown RBP8.12□□□□□ -1.11
CHD2-202ENST00000420239 BACH2Q9BYV9 841 aa8.12□□□□□ -1.11
CHD2-202ENST00000420239 PHF8Q9UPP1 1060 aa8.12□□□□□ -1.11
CHD2-202ENST00000420239 ABCA10Q8WWZ4 1543 aa8.12□□□□□ -1.11
CHD2-202ENST00000420239 TEX14Q8IWB6 1497 aa8.11□□□□□ -1.11
CHD2-202ENST00000420239 NFKBIBQ15653 356 aa8.11□□□□□ -1.11
CHD2-202ENST00000420239 IFNL1Q8IU54 200 aa8.11□□□□□ -1.11
CHD2-202ENST00000420239 MIA2Q96PC5 1412 aa8.11□□□□□ -1.11
CHD2-202ENST00000420239 RPRD2Q5VT52 1461 aaKnown RBP8.1□□□□□ -1.11
CHD2-202ENST00000420239 MTUS2Q5JR59 1369 aa8.1□□□□□ -1.11
CHD2-202ENST00000420239 DHX29Q7Z478 1369 aaKnown RBP8.1□□□□□ -1.11
CHD2-202ENST00000420239 FAM43AQ8N2R8 423 aa8.1□□□□□ -1.11
CHD2-202ENST00000420239 CABP2Q9NPB3 220 aa8.1□□□□□ -1.11
CHD2-202ENST00000420239 NCKAP5LQ9HCH0 1330 aa8.1□□□□□ -1.11
CHD2-202ENST00000420239 KDM6BO15054 1643 aa8.09□□□□□ -1.11
CHD2-202ENST00000420239 NLRP6P59044 892 aa8.09□□□□□ -1.11
CHD2-202ENST00000420239 KIF7Q2M1P5 1343 aa8.09□□□□□ -1.11
CHD2-202ENST00000420239 CADPSQ9ULU8 1353 aa8.09□□□□□ -1.11
CHD2-202ENST00000420239 EXOC6Q8TAG9 804 aa8.09□□□□□ -1.12
CHD2-202ENST00000420239 DCAF11Q8TEB1 546 aa8.09□□□□□ -1.12
CHD2-202ENST00000420239 L3MBTL2Q969R5 705 aa8.09□□□□□ -1.12
CHD2-202ENST00000420239 ANKRD30BQ9BXX2 1392 aa8.08□□□□□ -1.12
CHD2-202ENST00000420239 SENP3-EIF4A1A0A087X0R7 540 aa8.08□□□□□ -1.12
CHD2-202ENST00000420239 MS4A1P11836 297 aa8.08□□□□□ -1.12
CHD2-202ENST00000420239 ARID4BQ4LE39 1312 aaPredicted RBP8.08□□□□□ -1.12
CHD2-202ENST00000420239 DNMBPQ6XZF7 1577 aa8.07□□□□□ -1.12
CHD2-202ENST00000420239 RRP1P56182 461 aaKnown RBP8.06□□□□□ -1.12
CHD2-202ENST00000420239 NBPF8Q3BBV2 869 aa8.06□□□□□ -1.12
CHD2-202ENST00000420239 MPHOSPH9Q99550 1183 aa8.06□□□□□ -1.12
CHD2-202ENST00000420239 LRPPRCP42704 1394 aaKnown RBP8.06□□□□□ -1.12
CHD2-202ENST00000420239 MBD5Q9P267 1494 aa8.06□□□□□ -1.12
CHD2-202ENST00000420239 MAGI3Q5TCQ9 1506 aa8.06□□□□□ -1.12
CHD2-202ENST00000420239 SOX12O15370 315 aa8.06□□□□□ -1.12
CHD2-202ENST00000420239 MAP3K13O43283 966 aa8.06□□□□□ -1.12
CHD2-202ENST00000420239 ZMYND10O75800 440 aa8.06□□□□□ -1.12
CHD2-202ENST00000420239 DDRGK1Q96HY6 314 aa8.06□□□□□ -1.12
CHD2-202ENST00000420239 BCORL1Q5H9F3 1711 aa8.06□□□□□ -1.12
CHD2-202ENST00000420239 SLC4A3P48751 1232 aa8.05□□□□□ -1.12
CHD2-202ENST00000420239 SKAP1Q86WV1 359 aa8.05□□□□□ -1.12
CHD2-202ENST00000420239 HOMEZQ8IX15 550 aa8.05□□□□□ -1.12
CHD2-202ENST00000420239 LARP6Q9BRS8 491 aaKnown RBP8.05□□□□□ -1.12
CHD2-202ENST00000420239 ROCK1Q13464 1354 aa8.05□□□□□ -1.12
CHD2-202ENST00000420239 PNISRQ8TF01 805 aaKnown RBP8.05□□□□□ -1.12
CHD2-202ENST00000420239 RRAGDQ9NQL2 400 aaPredicted RBP8.05□□□□□ -1.12
CHD2-202ENST00000420239 ATP1B4Q9UN42 357 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms