RNA–Protein interactions for RNA: ENST00000419830.2

USP8-203, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 2,402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-203ENST00000419830 TMC1Q8TDI8 760 aa12.47□□□□□ -0.41
USP8-203ENST00000419830 SENP3Q9H4L4 574 aaPredicted RBP12.47□□□□□ -0.41
USP8-203ENST00000419830 SAMD9LQ8IVG5 1584 aa12.46□□□□□ -0.41
USP8-203ENST00000419830 FAM135AQ9P2D6 1515 aa12.45□□□□□ -0.42
USP8-203ENST00000419830 CDC42BPBQ9Y5S2 1711 aa12.45□□□□□ -0.42
USP8-203ENST00000419830 CCDC141Q6ZP82 1450 aa12.44□□□□□ -0.42
USP8-203ENST00000419830 PLA2R1Q13018 1463 aa12.44□□□□□ -0.42
USP8-203ENST00000419830 E9PCH4 1651 aa12.44□□□□□ -0.42
USP8-203ENST00000419830 BRD4O60885 1362 aaPredicted RBP12.44□□□□□ -0.42
USP8-203ENST00000419830 MYBBP1AQ9BQG0 1328 aaKnown RBP12.43□□□□□ -0.42
USP8-203ENST00000419830 RALBP1Q15311 655 aa12.43□□□□□ -0.42
USP8-203ENST00000419830 PRAG1Q86YV5 1406 aa12.43□□□□□ -0.42
USP8-203ENST00000419830 NBPF1Q3BBV0 1214 aa12.42□□□□□ -0.42
USP8-203ENST00000419830 KTN1Q86UP2 1357 aaKnown RBP12.42□□□□□ -0.42
USP8-203ENST00000419830 PREX2Q70Z35 1606 aa12.42□□□□□ -0.42
USP8-203ENST00000419830 RSPH4AQ5TD94 716 aa12.42□□□□□ -0.42
USP8-203ENST00000419830 PER1O15534 1290 aaPredicted RBP12.41□□□□□ -0.42
USP8-203ENST00000419830 TRPM1Q7Z4N2 1603 aa12.41□□□□□ -0.42
USP8-203ENST00000419830 CCDC144AA2RUR9 1427 aa12.4□□□□□ -0.43
USP8-203ENST00000419830 GPRASP1Q5JY77 1395 aa12.39□□□□□ -0.43
USP8-203ENST00000419830 PARD3Q8TEW0 1356 aa12.39□□□□□ -0.43
USP8-203ENST00000419830 RGL3Q3MIN7 710 aa12.39□□□□□ -0.43
USP8-203ENST00000419830 CCDC136Q96JN2 1154 aa12.39□□□□□ -0.43
USP8-203ENST00000419830 PHF23Q9BUL5 403 aaPredicted RBP12.39□□□□□ -0.43
USP8-203ENST00000419830 A2MP01023 1474 aa12.38□□□□□ -0.43
USP8-203ENST00000419830 SYCP2Q9BX26 1530 aa12.38□□□□□ -0.43
USP8-203ENST00000419830 UNC13BO14795 1591 aa12.38□□□□□ -0.43
USP8-203ENST00000419830 TESK2Q96S53 571 aa12.38□□□□□ -0.43
USP8-203ENST00000419830 TTC37Q6PGP7 1564 aa12.37□□□□□ -0.43
USP8-203ENST00000419830 MAST1Q9Y2H9 1570 aa12.37□□□□□ -0.43
USP8-203ENST00000419830 NLRP13Q86W25 1043 aa12.37□□□□□ -0.43
USP8-203ENST00000419830 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.37□□□□□ -0.43
USP8-203ENST00000419830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.36□□□□□ -0.435e-8■■□□□ 12
USP8-203ENST00000419830 PLEKHH2Q8IVE3 1493 aa12.36□□□□□ -0.43
USP8-203ENST00000419830 DISP3Q9P2K9 1392 aa12.35□□□□□ -0.43
USP8-203ENST00000419830 ARHGAP5Q13017 1502 aa12.34□□□□□ -0.43
USP8-203ENST00000419830 COL17A1Q9UMD9 1497 aaPredicted RBP12.34□□□□□ -0.43
USP8-203ENST00000419830 PRDM15P57071 1507 aaPredicted RBP12.34□□□□□ -0.43
USP8-203ENST00000419830 RRP1P56182 461 aaKnown RBP12.33□□□□□ -0.43
USP8-203ENST00000419830 ERICH6Q7L0X2 663 aa12.33□□□□□ -0.43
USP8-203ENST00000419830 IQGAP3Q86VI3 1631 aa12.33□□□□□ -0.43
USP8-203ENST00000419830 LAMC1P11047 1609 aa12.33□□□□□ -0.44
USP8-203ENST00000419830 PLXNC1O60486 1568 aa12.33□□□□□ -0.44
USP8-203ENST00000419830 ATP10AO60312 1499 aa12.33□□□□□ -0.44
USP8-203ENST00000419830 EXOC6Q8TAG9 804 aa12.32□□□□□ -0.44
USP8-203ENST00000419830 RCAN3Q9UKA8 241 aa12.32□□□□□ -0.44
USP8-203ENST00000419830 SALL2Q9Y467 1007 aaPredicted RBP12.32□□□□□ -0.44
USP8-203ENST00000419830 WASHC2CQ9Y4E1 1318 aa12.31□□□□□ -0.44
USP8-203ENST00000419830 SHROOM2Q13796 1616 aa12.31□□□□□ -0.44
USP8-203ENST00000419830 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
USP8-203ENST00000419830 PANK3Q9H999 370 aa12.31□□□□□ -0.44
USP8-203ENST00000419830 ERCC6L2Q5T890 1561 aa12.31□□□□□ -0.44
USP8-203ENST00000419830 CDCA7LQ96GN5 454 aa12.31□□□□□ -0.44
USP8-203ENST00000419830 BCL11AQ9H165 835 aa12.31□□□□□ -0.44
USP8-203ENST00000419830 MAGI2Q86UL8 1455 aa12.31□□□□□ -0.44
USP8-203ENST00000419830 PDE3BQ13370 1112 aa12.3□□□□□ -0.44
USP8-203ENST00000419830 CC2D1BQ5T0F9 858 aaKnown RBP12.3□□□□□ -0.44
USP8-203ENST00000419830 ERBINQ96RT1 1412 aa12.3□□□□□ -0.44
USP8-203ENST00000419830 CHD1O14646 1710 aa12.3□□□□□ -0.44
USP8-203ENST00000419830 MYO5CQ9NQX4 1742 aa12.3□□□□□ -0.44
USP8-203ENST00000419830 NOP58Q9Y2X3 529 aaKnown RBP12.29□□□□□ -0.44
USP8-203ENST00000419830 DUOX2Q9NRD8 1548 aa12.29□□□□□ -0.44
USP8-203ENST00000419830 ABCC2Q92887 1545 aa12.28□□□□□ -0.44
USP8-203ENST00000419830 INSRP06213 1382 aa12.28□□□□□ -0.44
USP8-203ENST00000419830 BLMP54132 1417 aaPredicted RBP12.27□□□□□ -0.44
USP8-203ENST00000419830 PLCH2O75038 1416 aa12.27□□□□□ -0.45
USP8-203ENST00000419830 EIF2AK4Q9P2K8 1649 aaKnown RBP12.27□□□□□ -0.45
USP8-203ENST00000419830 TMF1P82094 1093 aa12.27□□□□□ -0.45
USP8-203ENST00000419830 ZMYM4Q5VZL5 1548 aa12.26□□□□□ -0.45
USP8-203ENST00000419830 IPO9Q96P70 1041 aaKnown RBP12.25□□□□□ -0.45
USP8-203ENST00000419830 TRAPPC8Q9Y2L5 1435 aa12.25□□□□□ -0.45
USP8-203ENST00000419830 RNF17Q9BXT8 1623 aaKnown RBP12.25□□□□□ -0.45
USP8-203ENST00000419830 WDR7Q9Y4E6 1490 aa12.24□□□□□ -0.45
USP8-203ENST00000419830 EFCAB2Q5VUJ9 269 aa12.23□□□□□ -0.45
USP8-203ENST00000419830 PLIN1O60240 522 aa12.23□□□□□ -0.45
USP8-203ENST00000419830 ADAMTS8Q9UP79 889 aa12.22□□□□□ -0.45
USP8-203ENST00000419830 ABCC1P33527 1531 aa12.22□□□□□ -0.45
USP8-203ENST00000419830 ANP32AP39687 249 aaKnown RBP12.21□□□□□ -0.45
USP8-203ENST00000419830 MADDQ8WXG6 1647 aa12.21□□□□□ -0.45
USP8-203ENST00000419830 TCERG1O14776 1098 aaKnown RBP12.21□□□□□ -0.46
USP8-203ENST00000419830 AMER1Q5JTC6 1135 aaPredicted RBP12.21□□□□□ -0.46
USP8-203ENST00000419830 IQGAP1P46940 1657 aa12.2□□□□□ -0.46
USP8-203ENST00000419830 ZCCHC11Q5TAX3 1644 aaKnown RBP12.2□□□□□ -0.46
USP8-203ENST00000419830 PTPRTO14522 1441 aa12.2□□□□□ -0.46
USP8-203ENST00000419830 PPP2R1AP30153 589 aa12.2□□□□□ -0.46
USP8-203ENST00000419830 AFAP1Q8N556 730 aa12.19□□□□□ -0.46
USP8-203ENST00000419830 MYT1LQ9UL68 1186 aa12.19□□□□□ -0.46
USP8-203ENST00000419830 PDE4AP27815 886 aa12.19□□□□□ -0.46
USP8-203ENST00000419830 UHRF1BP1LA0JNW5 1464 aa12.18□□□□□ -0.46
USP8-203ENST00000419830 CRBNQ96SW2 442 aa12.18□□□□□ -0.46
USP8-203ENST00000419830 BACH2Q9BYV9 841 aa12.18□□□□□ -0.46
USP8-203ENST00000419830 TRPM2O94759 1503 aa12.18□□□□□ -0.46
USP8-203ENST00000419830 PLEKHH1Q9ULM0 1364 aa12.18□□□□□ -0.46
USP8-203ENST00000419830 DEKP35659 375 aaKnown RBP12.18□□□□□ -0.46
USP8-203ENST00000419830 NBR1Q14596 966 aa12.18□□□□□ -0.46
USP8-203ENST00000419830 SPAG9O60271 1321 aaKnown RBP12.17□□□□□ -0.46
USP8-203ENST00000419830 MS4A1P11836 297 aa12.17□□□□□ -0.46
USP8-203ENST00000419830 C20orf194Q5TEA3 1177 aa12.17□□□□□ -0.46
USP8-203ENST00000419830 ZBTB47Q9UFB7 747 aaPredicted RBP12.17□□□□□ -0.46
USP8-203ENST00000419830 KNSTRNQ9Y448 316 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms