RNA–Protein interactions for RNA: ENST00000417996.2

KRT3-201, Transcript of keratin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT3, Length 2,319 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3-201ENST00000417996 SMG6Q86US8 1419 aaKnown RBP27.67■■■□□ 2.02
KRT3-201ENST00000417996 ARHGAP5Q13017 1502 aa27.66■■■□□ 2.02
KRT3-201ENST00000417996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.66■■■□□ 2.02
KRT3-201ENST00000417996 TTC37Q6PGP7 1564 aa27.65■■■□□ 2.02
KRT3-201ENST00000417996 CHD1O14646 1710 aa27.65■■■□□ 2.02
KRT3-201ENST00000417996 PNISRQ8TF01 805 aaKnown RBP27.64■■■□□ 2.02
KRT3-201ENST00000417996 CCDC144AA2RUR9 1427 aa27.64■■■□□ 2.02
KRT3-201ENST00000417996 RGL3Q3MIN7 710 aa27.64■■■□□ 2.02
KRT3-201ENST00000417996 NUDCQ9Y266 331 aa27.62■■■□□ 2.01
KRT3-201ENST00000417996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.61■■■□□ 2.01
KRT3-201ENST00000417996 PRAG1Q86YV5 1406 aa27.59■■■□□ 2.01
KRT3-201ENST00000417996 MSH5O43196 834 aa27.57■■■□□ 2
KRT3-201ENST00000417996 TRPM1Q7Z4N2 1603 aa27.56■■■□□ 2
KRT3-201ENST00000417996 NBPF1Q3BBV0 1214 aa27.56■■■□□ 2
KRT3-201ENST00000417996 MYBBP1AQ9BQG0 1328 aaKnown RBP27.56■■■□□ 2
KRT3-201ENST00000417996 UNC13BO14795 1591 aa27.55■■■□□ 2
KRT3-201ENST00000417996 MAST1Q9Y2H9 1570 aa27.55■■■□□ 2
KRT3-201ENST00000417996 PLA2R1Q13018 1463 aa27.55■■■□□ 2
KRT3-201ENST00000417996 E9PCH4 1651 aa27.54■■■□□ 2
KRT3-201ENST00000417996 ERCC6L2Q5T890 1561 aa27.54■■■□□ 2
KRT3-201ENST00000417996 FANCIQ9NVI1 1328 aa27.54■■■□□ 2
KRT3-201ENST00000417996 RALBP1Q15311 655 aa27.53■■■□□ 2
KRT3-201ENST00000417996 PLEKHH2Q8IVE3 1493 aa27.53■■■□□ 2
KRT3-201ENST00000417996 SHROOM2Q13796 1616 aa27.52■■■□□ 2
KRT3-201ENST00000417996 BRD4O60885 1362 aaPredicted RBP27.52■■■□□ 2
KRT3-201ENST00000417996 MYO5CQ9NQX4 1742 aa27.51■■□□□ 1.99
KRT3-201ENST00000417996 A2MP01023 1474 aa27.51■■□□□ 1.99
KRT3-201ENST00000417996 ABCC2Q92887 1545 aa27.5■■□□□ 1.99
KRT3-201ENST00000417996 KTN1Q86UP2 1357 aaKnown RBP27.49■■□□□ 1.99
KRT3-201ENST00000417996 LRPPRCP42704 1394 aaKnown RBP27.49■■□□□ 1.99
KRT3-201ENST00000417996 PLXNC1O60486 1568 aa27.48■■□□□ 1.99
KRT3-201ENST00000417996 RNF123Q5XPI4 1314 aa27.47■■□□□ 1.99
KRT3-201ENST00000417996 IQGAP3Q86VI3 1631 aa27.46■■□□□ 1.99
KRT3-201ENST00000417996 GPRASP1Q5JY77 1395 aa27.43■■□□□ 1.98
KRT3-201ENST00000417996 DUOX2Q9NRD8 1548 aa27.43■■□□□ 1.98
KRT3-201ENST00000417996 PARD3Q8TEW0 1356 aa27.4■■□□□ 1.98
KRT3-201ENST00000417996 NLRP13Q86W25 1043 aa27.4■■□□□ 1.98
KRT3-201ENST00000417996 CCDC136Q96JN2 1154 aa27.4■■□□□ 1.98
KRT3-201ENST00000417996 DISP3Q9P2K9 1392 aa27.39■■□□□ 1.98
KRT3-201ENST00000417996 SALL2Q9Y467 1007 aaPredicted RBP27.39■■□□□ 1.98
KRT3-201ENST00000417996 PRDM15P57071 1507 aaPredicted RBP27.39■■□□□ 1.97
KRT3-201ENST00000417996 COL17A1Q9UMD9 1497 aaPredicted RBP27.38■■□□□ 1.97
KRT3-201ENST00000417996 PER1O15534 1290 aaPredicted RBP27.38■■□□□ 1.97
KRT3-201ENST00000417996 TESK2Q96S53 571 aa27.38■■□□□ 1.97
KRT3-201ENST00000417996 ERBINQ96RT1 1412 aa27.37■■□□□ 1.97
KRT3-201ENST00000417996 PLCH2O75038 1416 aa27.36■■□□□ 1.97
KRT3-201ENST00000417996 CC2D1BQ5T0F9 858 aaKnown RBP27.35■■□□□ 1.97
KRT3-201ENST00000417996 EFCAB2Q5VUJ9 269 aa27.35■■□□□ 1.97
KRT3-201ENST00000417996 LAMC1P11047 1609 aa27.35■■□□□ 1.97
KRT3-201ENST00000417996 MAGI2Q86UL8 1455 aa27.35■■□□□ 1.97
KRT3-201ENST00000417996 EIF2AK4Q9P2K8 1649 aaKnown RBP27.34■■□□□ 1.97
KRT3-201ENST00000417996 ZCCHC11Q5TAX3 1644 aaKnown RBP27.34■■□□□ 1.97
KRT3-201ENST00000417996 ERICH6Q7L0X2 663 aa27.33■■□□□ 1.97
KRT3-201ENST00000417996 ATP10AO60312 1499 aa27.32■■□□□ 1.96
KRT3-201ENST00000417996 PANK3Q9H999 370 aa27.32■■□□□ 1.96
KRT3-201ENST00000417996 TRAPPC8Q9Y2L5 1435 aa27.32■■□□□ 1.96
KRT3-201ENST00000417996 ABCC1P33527 1531 aa27.29■■□□□ 1.96
KRT3-201ENST00000417996 TMF1P82094 1093 aa27.29■■□□□ 1.96
KRT3-201ENST00000417996 RRP1P56182 461 aaKnown RBP27.25■■□□□ 1.95
KRT3-201ENST00000417996 WASHC2CQ9Y4E1 1318 aa27.24■■□□□ 1.95
KRT3-201ENST00000417996 RCAN3Q9UKA8 241 aa27.23■■□□□ 1.95
KRT3-201ENST00000417996 SPAG9O60271 1321 aaKnown RBP27.23■■□□□ 1.95
KRT3-201ENST00000417996 AFAP1Q8N556 730 aa27.23■■□□□ 1.95
KRT3-201ENST00000417996 RNF17Q9BXT8 1623 aaKnown RBP27.21■■□□□ 1.95
KRT3-201ENST00000417996 UHRF1BP1LA0JNW5 1464 aa27.21■■□□□ 1.95
KRT3-201ENST00000417996 CDCA7LQ96GN5 454 aa27.19■■□□□ 1.94
KRT3-201ENST00000417996 PDE3BQ13370 1112 aa27.19■■□□□ 1.94
KRT3-201ENST00000417996 EXOC6Q8TAG9 804 aa27.18■■□□□ 1.94
KRT3-201ENST00000417996 CLASP1Q7Z460 1538 aa27.18■■□□□ 1.94
KRT3-201ENST00000417996 MADDQ8WXG6 1647 aa27.16■■□□□ 1.94
KRT3-201ENST00000417996 ZFYVE16Q7Z3T8 1539 aa27.14■■□□□ 1.93
KRT3-201ENST00000417996 BLMP54132 1417 aaPredicted RBP27.13■■□□□ 1.93
KRT3-201ENST00000417996 TRPM2O94759 1503 aa27.12■■□□□ 1.93
KRT3-201ENST00000417996 RTEL1-TNFRSF6BF6WH68 1400 aa27.12■■□□□ 1.93
KRT3-201ENST00000417996 WDR7Q9Y4E6 1490 aa27.1■■□□□ 1.93
KRT3-201ENST00000417996 IQGAP1P46940 1657 aa27.1■■□□□ 1.93
KRT3-201ENST00000417996 SPHKAPQ2M3C7 1700 aa27.09■■□□□ 1.93
KRT3-201ENST00000417996 CLTCL1P53675 1640 aa27.09■■□□□ 1.93
KRT3-201ENST00000417996 KNSTRNQ9Y448 316 aa27.08■■□□□ 1.93
KRT3-201ENST00000417996 CEP152O94986 1710 aa27.08■■□□□ 1.93
KRT3-201ENST00000417996 MYT1LQ9UL68 1186 aa27.07■■□□□ 1.92
KRT3-201ENST00000417996 PTPRTO14522 1441 aa27.06■■□□□ 1.92
KRT3-201ENST00000417996 INSRP06213 1382 aa27.06■■□□□ 1.92
KRT3-201ENST00000417996 ADAMTS8Q9UP79 889 aa27.05■■□□□ 1.92
KRT3-201ENST00000417996 SCAF11Q99590 1463 aaKnown RBP27.05■■□□□ 1.92
KRT3-201ENST00000417996 PLIN1O60240 522 aa27.05■■□□□ 1.92
KRT3-201ENST00000417996 ARAP3Q8WWN8 1544 aa27.05■■□□□ 1.92
KRT3-201ENST00000417996 ZMYM4Q5VZL5 1548 aa27.04■■□□□ 1.92
KRT3-201ENST00000417996 NOP58Q9Y2X3 529 aaKnown RBP27.04■■□□□ 1.92
KRT3-201ENST00000417996 DEPDC5O75140 1603 aa27.03■■□□□ 1.92
KRT3-201ENST00000417996 KIF3BO15066 747 aa27.02■■□□□ 1.92
KRT3-201ENST00000417996 PPP2R1AP30153 589 aa27.02■■□□□ 1.92
KRT3-201ENST00000417996 KANK1Q14678 1352 aa27.02■■□□□ 1.92
KRT3-201ENST00000417996 TET3O43151 1660 aa27.02■■□□□ 1.92
KRT3-201ENST00000417996 ATP7AQ04656 1500 aa27.02■■□□□ 1.92
KRT3-201ENST00000417996 FANCAO15360 1455 aa27.01■■□□□ 1.92
KRT3-201ENST00000417996 CDCA8Q53HL2 280 aa27.01■■□□□ 1.91
KRT3-201ENST00000417996 SCAPERQ9BY12 1400 aa27.01■■□□□ 1.91
KRT3-201ENST00000417996 AMER1Q5JTC6 1135 aaPredicted RBP27■■□□□ 1.91
KRT3-201ENST00000417996 ANP32AP39687 249 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms