RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 TOP2BQ02880 1626 aa12.69□□□□□ -0.38
SATB1-204ENST00000417717 BRD2P25440 801 aaKnown RBP12.69□□□□□ -0.38
SATB1-204ENST00000417717 MEX3CQ5U5Q3 659 aaKnown RBP12.69□□□□□ -0.38
SATB1-204ENST00000417717 PMFBP1Q8TBY8 1022 aa12.68□□□□□ -0.38
SATB1-204ENST00000417717 DYDC1Q8WWB3 177 aa12.68□□□□□ -0.38
SATB1-204ENST00000417717 KCNJ4P48050 445 aa12.68□□□□□ -0.38
SATB1-204ENST00000417717 MFAP1P55081 439 aaKnown RBP12.68□□□□□ -0.38
SATB1-204ENST00000417717 GOLGA6L19H0YKK7 550 aa12.67□□□□□ -0.38
SATB1-204ENST00000417717 AXDND1Q5T1B0 1012 aaPredicted RBP12.67□□□□□ -0.38
SATB1-204ENST00000417717 RAPGEF2Q9Y4G8 1499 aa12.67□□□□□ -0.38
SATB1-204ENST00000417717 HSP90B1P14625 803 aaKnown RBP12.67□□□□□ -0.38
SATB1-204ENST00000417717 MAPK8IP3Q9UPT6 1336 aa12.67□□□□□ -0.38
SATB1-204ENST00000417717 ERCC4Q92889 916 aaPredicted RBP12.67□□□□□ -0.38
SATB1-204ENST00000417717 LETM1O95202 739 aaPredicted RBP12.66□□□□□ -0.38
SATB1-204ENST00000417717 CCDC34Q96HJ3 373 aa12.66□□□□□ -0.38
SATB1-204ENST00000417717 KIF21BO75037 1637 aa12.66□□□□□ -0.38
SATB1-204ENST00000417717 CENPQQ7L2Z9 268 aaPredicted RBP12.66□□□□□ -0.38
SATB1-204ENST00000417717 BCL11BQ9C0K0 894 aaPredicted RBP12.66□□□□□ -0.38
SATB1-204ENST00000417717 CFAP53Q96M91 514 aa12.66□□□□□ -0.38
SATB1-204ENST00000417717 GPATCH11Q8N954 259 aa12.65□□□□□ -0.38
SATB1-204ENST00000417717 ERCC6Q03468 1493 aa12.65□□□□□ -0.38
SATB1-204ENST00000417717 ST18O60284 1047 aa12.65□□□□□ -0.38
SATB1-204ENST00000417717 ATP6V1DQ9Y5K8 247 aa12.65□□□□□ -0.38
SATB1-204ENST00000417717 TIGD1Q96MW7 591 aa12.65□□□□□ -0.38
SATB1-204ENST00000417717 SENP3-EIF4A1A0A087X0R7 540 aa12.64□□□□□ -0.39
SATB1-204ENST00000417717 U2SURPO15042 1029 aaKnown RBP12.64□□□□□ -0.39
SATB1-204ENST00000417717 CCDC9Q9Y3X0 531 aaKnown RBP12.64□□□□□ -0.39
SATB1-204ENST00000417717 ERICH3Q5RHP9 1530 aa12.64□□□□□ -0.39
SATB1-204ENST00000417717 CAVIN1Q6NZI2 390 aaKnown RBP12.64□□□□□ -0.39
SATB1-204ENST00000417717 HOMER1Q86YM7 354 aa12.64□□□□□ -0.39
SATB1-204ENST00000417717 IFT57Q9NWB7 429 aa12.64□□□□□ -0.39
SATB1-204ENST00000417717 PDE3BQ13370 1112 aa12.64□□□□□ -0.39
SATB1-204ENST00000417717 PRDM10Q9NQV6 1147 aa12.64□□□□□ -0.39
SATB1-204ENST00000417717 BECN2A8MW95 431 aa12.63□□□□□ -0.39
SATB1-204ENST00000417717 P3H3Q8IVL6 736 aa12.63□□□□□ -0.39
SATB1-204ENST00000417717 E9PSI1 815 aa12.63□□□□□ -0.39
SATB1-204ENST00000417717 CTR9Q6PD62 1173 aa12.63□□□□□ -0.39
SATB1-204ENST00000417717 RUFY1Q96T51 708 aa12.63□□□□□ -0.39
SATB1-204ENST00000417717 CHMP4AQ9BY43 222 aa12.63□□□□□ -0.39
SATB1-204ENST00000417717 KIAA0754O94854 1291 aa12.63□□□□□ -0.39
SATB1-204ENST00000417717 GTF2A1P52655 376 aaPredicted RBP12.63□□□□□ -0.39
SATB1-204ENST00000417717 RSPH4AQ5TD94 716 aa12.63□□□□□ -0.39
SATB1-204ENST00000417717 SYNJ1O43426 1573 aa12.63□□□□□ -0.39
SATB1-204ENST00000417717 TRAK2O60296 914 aa12.62□□□□□ -0.39
SATB1-204ENST00000417717 ZSCAN30Q86W11 494 aa12.62□□□□□ -0.39
SATB1-204ENST00000417717 FBLN2P98095 1184 aa12.62□□□□□ -0.39
SATB1-204ENST00000417717 PES1O00541 588 aaKnown RBP12.62□□□□□ -0.39
SATB1-204ENST00000417717 PAK3O75914 559 aaPredicted RBP12.62□□□□□ -0.39
SATB1-204ENST00000417717 INCENPQ9NQS7 918 aa12.62□□□□□ -0.39
SATB1-204ENST00000417717 PAIP2Q9BPZ3 127 aaKnown RBP12.61□□□□□ -0.39
SATB1-204ENST00000417717 CHMP7Q8WUX9 453 aaPredicted RBP12.61□□□□□ -0.39
SATB1-204ENST00000417717 PLCD3Q8N3E9 789 aa12.61□□□□□ -0.39
SATB1-204ENST00000417717 CDCA8Q53HL2 280 aa12.61□□□□□ -0.39
SATB1-204ENST00000417717 GTPBP4Q9BZE4 634 aaKnown RBP12.6□□□□□ -0.39
SATB1-204ENST00000417717 KNSTRNQ9Y448 316 aa12.6□□□□□ -0.39
SATB1-204ENST00000417717 FGD5Q6ZNL6 1462 aa12.6□□□□□ -0.39
SATB1-204ENST00000417717 FRAT2O75474 233 aaPredicted RBP12.6□□□□□ -0.39
SATB1-204ENST00000417717 RUSC2Q8N2Y8 1516 aa12.6□□□□□ -0.39
SATB1-204ENST00000417717 ERICH4A6NGS2 130 aa12.59□□□□□ -0.39
SATB1-204ENST00000417717 PLCD4Q9BRC7 762 aa12.59□□□□□ -0.39
SATB1-204ENST00000417717 ZNF526Q8TF50 670 aaPredicted RBP12.59□□□□□ -0.39
SATB1-204ENST00000417717 FAM107BQ9H098 131 aa12.59□□□□□ -0.39
SATB1-204ENST00000417717 NUCB2P80303 420 aa12.58□□□□□ -0.4
SATB1-204ENST00000417717 GRPEL1Q9HAV7 217 aa12.58□□□□□ -0.4
SATB1-204ENST00000417717 MTUS2Q5JR59 1369 aa12.58□□□□□ -0.4
SATB1-204ENST00000417717 CBX1P83916 185 aa12.58□□□□□ -0.4
SATB1-204ENST00000417717 LAMC3Q9Y6N6 1575 aa12.58□□□□□ -0.4
SATB1-204ENST00000417717 RBM28Q9NW13 759 aaKnown RBP12.58□□□□□ -0.4
SATB1-204ENST00000417717 GOLGA6L7A0A1B0GV03 622 aa12.57□□□□□ -0.4
SATB1-204ENST00000417717 IGF1RP08069 1367 aa12.57□□□□□ -0.4
SATB1-204ENST00000417717 TDO2P48775 406 aa12.57□□□□□ -0.4
SATB1-204ENST00000417717 SASS6Q6UVJ0 657 aa12.57□□□□□ -0.4
SATB1-204ENST00000417717 CCDC112Q8NEF3 446 aa12.57□□□□□ -0.4
SATB1-204ENST00000417717 IPO4Q8TEX9 1081 aaKnown RBP12.57□□□□□ -0.4
SATB1-204ENST00000417717 TPM1P09493 284 aa12.57□□□□□ -0.4
SATB1-204ENST00000417717 FMN1Q68DA7 1419 aa12.56□□□□□ -0.4
SATB1-204ENST00000417717 DYNC1I1O14576 645 aa12.56□□□□□ -0.4
SATB1-204ENST00000417717 FOXD4L1Q9NU39 408 aa12.56□□□□□ -0.4
SATB1-204ENST00000417717 LMOD3Q0VAK6 560 aa12.56□□□□□ -0.4
SATB1-204ENST00000417717 WWC1Q8IX03 1113 aa12.55□□□□□ -0.4
SATB1-204ENST00000417717 SMAP1Q8IYB5 467 aaPredicted RBP12.55□□□□□ -0.4
SATB1-204ENST00000417717 EIF3JO75822 258 aaKnown RBP12.55□□□□□ -0.4
SATB1-204ENST00000417717 KIF20AO95235 890 aa12.55□□□□□ -0.4
SATB1-204ENST00000417717 CUX1P39880 1505 aa12.55□□□□□ -0.4
SATB1-204ENST00000417717 TSR1Q2NL82 804 aaKnown RBP12.55□□□□□ -0.4
SATB1-204ENST00000417717 PRXQ9BXM0 1461 aa12.55□□□□□ -0.4
SATB1-204ENST00000417717 RNF20Q5VTR2 975 aa12.54□□□□□ -0.4
SATB1-204ENST00000417717 IPO8O15397 1037 aaKnown RBP12.54□□□□□ -0.4
SATB1-204ENST00000417717 CLCN1P35523 988 aa12.54□□□□□ -0.4
SATB1-204ENST00000417717 NBPF1Q3BBV0 1214 aa12.54□□□□□ -0.4
SATB1-204ENST00000417717 ZRSR2Q15696 482 aaKnown RBP12.54□□□□□ -0.4
SATB1-204ENST00000417717 TPD52L1Q16890 204 aaPredicted RBP12.54□□□□□ -0.4
SATB1-204ENST00000417717 DNMBPQ6XZF7 1577 aa12.53□□□□□ -0.4
SATB1-204ENST00000417717 BIVM-ERCC5R4GMW8 1640 aa12.53□□□□□ -0.4
SATB1-204ENST00000417717 FAM193AP78312 1265 aa12.53□□□□□ -0.4
SATB1-204ENST00000417717 DDX11Q96FC9 970 aa12.53□□□□□ -0.4
SATB1-204ENST00000417717 MBD3O95983 291 aa12.52□□□□□ -0.4
SATB1-204ENST00000417717 TNNT1P13805 278 aa12.52□□□□□ -0.4
SATB1-204ENST00000417717 GOLGA6L10A6NI86 522 aa12.52□□□□□ -0.4
SATB1-204ENST00000417717 C11orf95C9JLR9 678 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms