RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 CARMIL1Q5VZK9 1371 aa14.97□□□□□ -0.01
UBR4-205ENST00000417040 RILPL2Q969X0 211 aa14.97□□□□□ -0.01
UBR4-205ENST00000417040 ST18O60284 1047 aa14.97□□□□□ -0.01
UBR4-205ENST00000417040 KANK1Q14678 1352 aa14.97□□□□□ -0.01
UBR4-205ENST00000417040 ELL2O00472 640 aaPredicted RBP14.96□□□□□ -0.01
UBR4-205ENST00000417040 COG6Q9Y2V7 657 aa14.96□□□□□ -0.01
UBR4-205ENST00000417040 CUX2O14529 1486 aa14.96□□□□□ -0.01
UBR4-205ENST00000417040 GGT6Q6P531 493 aa14.96□□□□□ -0.02
UBR4-205ENST00000417040 CCDC88BA6NC98 1476 aa14.96□□□□□ -0.02
UBR4-205ENST00000417040 PHF14O94880 888 aa14.96□□□□□ -0.02
UBR4-205ENST00000417040 NUP155O75694 1391 aa14.95□□□□□ -0.02
UBR4-205ENST00000417040 CSPP1Q1MSJ5 1256 aa14.94□□□□□ -0.02
UBR4-205ENST00000417040 IL27Q8NEV9 243 aa14.93□□□□□ -0.02
UBR4-205ENST00000417040 NLRP13Q86W25 1043 aa14.93□□□□□ -0.02
UBR4-205ENST00000417040 KIF16BQ96L93 1317 aa14.93□□□□□ -0.02
UBR4-205ENST00000417040 CECR2Q9BXF3 1484 aa14.93□□□□□ -0.02
UBR4-205ENST00000417040 PATL2C9JE40 543 aaKnown RBP14.92□□□□□ -0.02
UBR4-205ENST00000417040 PANK3Q9H999 370 aa14.92□□□□□ -0.02
UBR4-205ENST00000417040 MYBBP1AQ9BQG0 1328 aaKnown RBP14.92□□□□□ -0.02
UBR4-205ENST00000417040 BRPF3Q9ULD4 1205 aa14.92□□□□□ -0.02
UBR4-205ENST00000417040 DHX57Q6P158 1386 aaKnown RBP14.92□□□□□ -0.02
UBR4-205ENST00000417040 GORABQ5T7V8 394 aa14.91□□□□□ -0.02
UBR4-205ENST00000417040 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.91□□□□□ -0.02
UBR4-205ENST00000417040 FBXW7Q969H0 707 aa14.91□□□□□ -0.02
UBR4-205ENST00000417040 STK31Q9BXU1 1019 aa14.91□□□□□ -0.02
UBR4-205ENST00000417040 PES1O00541 588 aaKnown RBP14.91□□□□□ -0.02
UBR4-205ENST00000417040 PDE3BQ13370 1112 aa14.91□□□□□ -0.02
UBR4-205ENST00000417040 RASSF8Q8NHQ8 419 aa14.91□□□□□ -0.02
UBR4-205ENST00000417040 KIF15Q9NS87 1388 aa14.91□□□□□ -0.02
UBR4-205ENST00000417040 GPATCH3Q96I76 525 aa14.9□□□□□ -0.02
UBR4-205ENST00000417040 NFKBIBQ15653 356 aa14.9□□□□□ -0.02
UBR4-205ENST00000417040 H3BQV1 296 aa14.89□□□□□ -0.03
UBR4-205ENST00000417040 IFFO2Q5TF58 517 aa14.89□□□□□ -0.03
UBR4-205ENST00000417040 SF3A1Q15459 793 aaKnown RBP14.89□□□□□ -0.03
UBR4-205ENST00000417040 HMMRO75330 724 aa14.89□□□□□ -0.03
UBR4-205ENST00000417040 PRKRIP1Q9H875 184 aaPredicted RBP14.89□□□□□ -0.03
UBR4-205ENST00000417040 ZBED9Q6R2W3 1325 aa14.89□□□□□ -0.03
UBR4-205ENST00000417040 ST20-MTHFSA0A0A6YYL1 179 aa14.89□□□□□ -0.03
UBR4-205ENST00000417040 SKOR2Q2VWA4 1001 aaPredicted RBP14.88□□□□□ -0.03
UBR4-205ENST00000417040 MCTP1Q6DN14 999 aa14.88□□□□□ -0.03
UBR4-205ENST00000417040 GOLGA6L19H0YKK7 550 aa14.87□□□□□ -0.03
UBR4-205ENST00000417040 TOMM22Q9NS69 142 aa14.87□□□□□ -0.03
UBR4-205ENST00000417040 R3HCC1Q9Y3T6 440 aaKnown RBP14.86□□□□□ -0.03
UBR4-205ENST00000417040 HNRNPMP52272 730 aaKnown RBP eCLIP14.86□□□□□ -0.03
UBR4-205ENST00000417040 LTV1Q96GA3 475 aaPredicted RBP14.86□□□□□ -0.03
UBR4-205ENST00000417040 FMN1Q68DA7 1419 aa14.86□□□□□ -0.03
UBR4-205ENST00000417040 TPM3P06753 285 aa14.86□□□□□ -0.03
UBR4-205ENST00000417040 FAM43AQ8N2R8 423 aa14.86□□□□□ -0.03
UBR4-205ENST00000417040 SPAG9O60271 1321 aaKnown RBP14.85□□□□□ -0.03
UBR4-205ENST00000417040 NUTM2FA1L443 756 aa14.85□□□□□ -0.03
UBR4-205ENST00000417040 FOSBP53539 338 aa14.85□□□□□ -0.03
UBR4-205ENST00000417040 TAF7LQ5H9L4 462 aa14.84□□□□□ -0.03
UBR4-205ENST00000417040 BECN2A8MW95 431 aa14.84□□□□□ -0.03
UBR4-205ENST00000417040 CSB-PGBD3P0DP91 1061 aa14.84□□□□□ -0.03
UBR4-205ENST00000417040 SETQ01105 290 aaPredicted RBP14.84□□□□□ -0.03
UBR4-205ENST00000417040 RBM10P98175 930 aaKnown RBP14.83□□□□□ -0.03
UBR4-205ENST00000417040 TPD52L1Q16890 204 aaPredicted RBP14.83□□□□□ -0.04
UBR4-205ENST00000417040 FAM184AQ8NB25 1140 aa14.83□□□□□ -0.04
UBR4-205ENST00000417040 TRAK1Q9UPV9 953 aa14.83□□□□□ -0.04
UBR4-205ENST00000417040 APAF1O14727 1248 aa14.82□□□□□ -0.04
UBR4-205ENST00000417040 ZKSCAN2Q63HK3 967 aa14.82□□□□□ -0.04
UBR4-205ENST00000417040 NECTIN2Q92692 538 aa14.82□□□□□ -0.04
UBR4-205ENST00000417040 EIF3AQ14152 1382 aaKnown RBP14.82□□□□□ -0.04
UBR4-205ENST00000417040 CHMP5Q9NZZ3 219 aa14.81□□□□□ -0.04
UBR4-205ENST00000417040 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.8□□□□□ -0.04
UBR4-205ENST00000417040 E9PSI1 815 aa14.79□□□□□ -0.04
UBR4-205ENST00000417040 ANO2Q9NQ90 1003 aa14.79□□□□□ -0.04
UBR4-205ENST00000417040 ANKRD30AQ9BXX3 1397 aa14.78□□□□□ -0.04
UBR4-205ENST00000417040 FHOD3Q2V2M9 1422 aa14.78□□□□□ -0.04
UBR4-205ENST00000417040 RNF214Q8ND24 703 aa14.78□□□□□ -0.04
UBR4-205ENST00000417040 HOMER1Q86YM7 354 aa14.78□□□□□ -0.04
UBR4-205ENST00000417040 PHLDB1Q86UU1 1377 aa14.77□□□□□ -0.04
UBR4-205ENST00000417040 PANK1Q8TE04 598 aa14.77□□□□□ -0.04
UBR4-205ENST00000417040 PRM3Q9NNZ6 103 aa14.77□□□□□ -0.04
UBR4-205ENST00000417040 FRAT2O75474 233 aaPredicted RBP14.77□□□□□ -0.05
UBR4-205ENST00000417040 VPS53Q5VIR6 699 aa14.77□□□□□ -0.05
UBR4-205ENST00000417040 IFT57Q9NWB7 429 aa14.76□□□□□ -0.05
UBR4-205ENST00000417040 PKNOX2Q96KN3 472 aa14.75□□□□□ -0.05
UBR4-205ENST00000417040 C22orf23Q9BZE7 217 aa14.75□□□□□ -0.05
UBR4-205ENST00000417040 LNPKQ9C0E8 428 aa14.75□□□□□ -0.05
UBR4-205ENST00000417040 TERF2IPQ9NYB0 399 aa14.75□□□□□ -0.05
UBR4-205ENST00000417040 BICD2Q8TD16 824 aa14.75□□□□□ -0.05
UBR4-205ENST00000417040 BAZ1AQ9NRL2 1556 aaPredicted RBP14.75□□□□□ -0.05
UBR4-205ENST00000417040 WWC1Q8IX03 1113 aa14.75□□□□□ -0.05
UBR4-205ENST00000417040 NGEFQ8N5V2 710 aa14.75□□□□□ -0.05
UBR4-205ENST00000417040 CCDC34Q96HJ3 373 aa14.75□□□□□ -0.05
UBR4-205ENST00000417040 USP47Q96K76 1375 aa14.75□□□□□ -0.05
UBR4-205ENST00000417040 VPS37CA5D8V6 355 aaPredicted RBP14.74□□□□□ -0.05
UBR4-205ENST00000417040 NASPP49321 788 aaPredicted RBP14.74□□□□□ -0.05
UBR4-205ENST00000417040 AMPHP49418 695 aa14.74□□□□□ -0.05
UBR4-205ENST00000417040 KIF3BO15066 747 aa14.74□□□□□ -0.05
UBR4-205ENST00000417040 ERCC6Q03468 1493 aa14.73□□□□□ -0.05
UBR4-205ENST00000417040 PCMTD1Q96MG8 357 aaPredicted RBP14.73□□□□□ -0.05
UBR4-205ENST00000417040 DIAPH3Q9NSV4 1193 aa14.73□□□□□ -0.05
UBR4-205ENST00000417040 KDM4AO75164 1064 aa14.73□□□□□ -0.05
UBR4-205ENST00000417040 HDGFP51858 240 aaKnown RBP14.73□□□□□ -0.05
UBR4-205ENST00000417040 ATP6V1DQ9Y5K8 247 aa14.73□□□□□ -0.05
UBR4-205ENST00000417040 MARCH6O60337 910 aa14.72□□□□□ -0.05
UBR4-205ENST00000417040 RAPGEF2Q9Y4G8 1499 aa14.72□□□□□ -0.05
UBR4-205ENST00000417040 GPS2Q13227 327 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms