RNA–Protein interactions for RNA: ENST00000415688.1

STRADB-203, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-203ENST00000415688 SLC24A3Q9HC58 644 aa9.24□□□□□ -0.93
STRADB-203ENST00000415688 KRI1Q8N9T8 703 aaKnown RBP9.23□□□□□ -0.93
STRADB-203ENST00000415688 RBM33Q96EV2 1170 aaKnown RBP9.23□□□□□ -0.93
STRADB-203ENST00000415688 C6orf132Q5T0Z8 1188 aa9.22□□□□□ -0.93
STRADB-203ENST00000415688 AK7Q96M32 723 aa9.22□□□□□ -0.93
STRADB-203ENST00000415688 MINK1Q8N4C8 1332 aaPredicted RBP9.22□□□□□ -0.93
STRADB-203ENST00000415688 MAP2K5Q13163 448 aa9.21□□□□□ -0.94
STRADB-203ENST00000415688 TSR1Q2NL82 804 aaKnown RBP9.21□□□□□ -0.94
STRADB-203ENST00000415688 ADAM33Q9BZ11 813 aa9.21□□□□□ -0.94
STRADB-203ENST00000415688 BCL2L12Q9HB09 334 aa9.21□□□□□ -0.94
STRADB-203ENST00000415688 CDHR5Q9HBB8 845 aa9.21□□□□□ -0.94
STRADB-203ENST00000415688 NPDC1Q9NQX5 325 aaPredicted RBP9.21□□□□□ -0.94
STRADB-203ENST00000415688 ST18O60284 1047 aa9.19□□□□□ -0.94
STRADB-203ENST00000415688 RBM27Q9P2N5 1060 aaKnown RBP9.19□□□□□ -0.94
STRADB-203ENST00000415688 RB1CC1Q8TDY2 1594 aa9.19□□□□□ -0.94
STRADB-203ENST00000415688 CC2D2AQ9P2K1 1620 aa9.17□□□□□ -0.94
STRADB-203ENST00000415688 IRF6O14896 467 aa9.17□□□□□ -0.94
STRADB-203ENST00000415688 PTPREP23469 700 aa9.16□□□□□ -0.94
STRADB-203ENST00000415688 FECHP22830 423 aa9.15□□□□□ -0.94
STRADB-203ENST00000415688 ERBB3P21860 1342 aa9.14□□□□□ -0.95
STRADB-203ENST00000415688 PPP1R3GB7ZBB8 358 aa9.14□□□□□ -0.95
STRADB-203ENST00000415688 CCDC102AQ96A19 550 aa9.14□□□□□ -0.95
STRADB-203ENST00000415688 TRIM66O15016 1216 aa9.13□□□□□ -0.95
STRADB-203ENST00000415688 EMP3P54852 163 aa9.13□□□□□ -0.95
STRADB-203ENST00000415688 KCNH8Q96L42 1107 aa9.13□□□□□ -0.95
STRADB-203ENST00000415688 BRPF1P55201 1214 aaPredicted RBP9.12□□□□□ -0.95
STRADB-203ENST00000415688 PRSS12P56730 875 aa9.12□□□□□ -0.95
STRADB-203ENST00000415688 TTC13Q8NBP0 860 aa9.12□□□□□ -0.95
STRADB-203ENST00000415688 VARS2Q5ST30 1063 aaKnown RBP9.11□□□□□ -0.95
STRADB-203ENST00000415688 FAM163AQ96GL9 167 aaPredicted RBP9.11□□□□□ -0.95
STRADB-203ENST00000415688 COL9A1P20849 921 aa9.1□□□□□ -0.95
STRADB-203ENST00000415688 AMHR2Q16671 573 aa9.1□□□□□ -0.95
STRADB-203ENST00000415688 PADI6Q6TGC4 694 aa9.1□□□□□ -0.95
STRADB-203ENST00000415688 CDCA7LQ96GN5 454 aa9.1□□□□□ -0.95
STRADB-203ENST00000415688 OATP04181 439 aa9.09□□□□□ -0.95
STRADB-203ENST00000415688 PDE4DQ08499 809 aa9.09□□□□□ -0.95
STRADB-203ENST00000415688 NEUROD2Q15784 382 aa9.09□□□□□ -0.95
STRADB-203ENST00000415688 ONECUT3O60422 494 aaPredicted RBP9.08□□□□□ -0.96
STRADB-203ENST00000415688 PBX2P40425 430 aa9.08□□□□□ -0.96
STRADB-203ENST00000415688 MARVELD3Q96A59 401 aa9.08□□□□□ -0.96
STRADB-203ENST00000415688 ARHGAP33O14559 1287 aa9.07□□□□□ -0.96
STRADB-203ENST00000415688 ZNF687Q8N1G0 1237 aa9.07□□□□□ -0.96
STRADB-203ENST00000415688 KCNK17Q96T54 332 aa9.07□□□□□ -0.96
STRADB-203ENST00000415688 FAM205CA6NFA0 338 aa9.06□□□□□ -0.96
STRADB-203ENST00000415688 ADGRG1Q9Y653 693 aa9.06□□□□□ -0.96
STRADB-203ENST00000415688 TRIM6-TRIM34B2RNG4 842 aa9.05□□□□□ -0.96
STRADB-203ENST00000415688 LCE2DQ5TA82 110 aaPredicted RBP9.05□□□□□ -0.96
STRADB-203ENST00000415688 METTL3Q86U44 580 aaKnown RBP9.05□□□□□ -0.96
STRADB-203ENST00000415688 SLC4A5Q9BY07 1137 aa9.05□□□□□ -0.96
STRADB-203ENST00000415688 DAXXQ9UER7 740 aaPredicted RBP9.05□□□□□ -0.96
STRADB-203ENST00000415688 RBM46Q8TBY0 533 aaKnown RBP9.04□□□□□ -0.96
STRADB-203ENST00000415688 TSKSQ9UJT2 592 aa9.04□□□□□ -0.96
STRADB-203ENST00000415688 POTEEQ6S8J3 1075 aa9.03□□□□□ -0.96
STRADB-203ENST00000415688 PACS2Q86VP3 889 aa9.03□□□□□ -0.96
STRADB-203ENST00000415688 PXYLP1Q8TE99 480 aa9.03□□□□□ -0.96
STRADB-203ENST00000415688 HS3ST6Q96QI5 342 aa9.03□□□□□ -0.96
STRADB-203ENST00000415688 ZBED2Q9BTP6 218 aa9.03□□□□□ -0.96
STRADB-203ENST00000415688 FAM198AQ9UFP1 575 aa9.03□□□□□ -0.96
STRADB-203ENST00000415688 NBPF26B4DH59 902 aa9.02□□□□□ -0.97
STRADB-203ENST00000415688 PSEN2P49810 448 aa9.02□□□□□ -0.97
STRADB-203ENST00000415688 TMEM132AQ24JP5 1023 aa9.02□□□□□ -0.97
STRADB-203ENST00000415688 CLCN1P35523 988 aa9.01□□□□□ -0.97
STRADB-203ENST00000415688 PARP9Q8IXQ6 854 aa9.01□□□□□ -0.97
STRADB-203ENST00000415688 KDM4CQ9H3R0 1056 aa9.01□□□□□ -0.97
STRADB-203ENST00000415688 TTLL12Q14166 644 aaPredicted RBP9□□□□□ -0.97
STRADB-203ENST00000415688 PHOX2BQ99453 314 aa9□□□□□ -0.97
STRADB-203ENST00000415688 GPBP1L1Q9HC44 474 aaPredicted RBP9□□□□□ -0.97
STRADB-203ENST00000415688 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.99□□□□□ -0.97
STRADB-203ENST00000415688 POTEB3A0JP26 581 aa8.99□□□□□ -0.97
STRADB-203ENST00000415688 FAM161AQ3B820 660 aa8.99□□□□□ -0.97
STRADB-203ENST00000415688 PROX2Q3B8N5 592 aa8.99□□□□□ -0.97
STRADB-203ENST00000415688 POTEBQ6S5H4 581 aa8.99□□□□□ -0.97
STRADB-203ENST00000415688 TATDN2Q93075 761 aa8.99□□□□□ -0.97
STRADB-203ENST00000415688 EYA1Q99502 592 aa8.99□□□□□ -0.97
STRADB-203ENST00000415688 TMUB1Q9BVT8 246 aa8.99□□□□□ -0.97
STRADB-203ENST00000415688 GPCPD1Q9NPB8 672 aa8.99□□□□□ -0.97
STRADB-203ENST00000415688 RABGEF1Q9UJ41 708 aa8.99□□□□□ -0.97
STRADB-203ENST00000415688 BICRAQ9NZM4 1560 aa8.99□□□□□ -0.97
STRADB-203ENST00000415688 CCDC180Q9P1Z9 1646 aa8.98□□□□□ -0.97
STRADB-203ENST00000415688 DMRTA1Q5VZB9 504 aa8.98□□□□□ -0.97
STRADB-203ENST00000415688 NUDT18Q6ZVK8 323 aa8.98□□□□□ -0.97
STRADB-203ENST00000415688 AXIN2Q9Y2T1 843 aa8.98□□□□□ -0.97
STRADB-203ENST00000415688 TK2O00142 265 aa8.97□□□□□ -0.97
STRADB-203ENST00000415688 GIGYF2Q6Y7W6 1299 aaKnown RBP8.97□□□□□ -0.97
STRADB-203ENST00000415688 PNMA3Q9UL41 463 aa8.97□□□□□ -0.97
STRADB-203ENST00000415688 MDM2Q00987 491 aaPredicted RBP8.96□□□□□ -0.98
STRADB-203ENST00000415688 KIAA1468Q9P260 1216 aa8.96□□□□□ -0.98
STRADB-203ENST00000415688 VPS9D1Q9Y2B5 631 aa8.96□□□□□ -0.98
STRADB-203ENST00000415688 RCCD1A6NED2 376 aa8.95□□□□□ -0.98
STRADB-203ENST00000415688 DNAJB2P25686 324 aa8.95□□□□□ -0.98
STRADB-203ENST00000415688 DDRGK1Q96HY6 314 aa8.95□□□□□ -0.98
STRADB-203ENST00000415688 REPIN1Q9BWE0 567 aaKnown RBP8.95□□□□□ -0.98
STRADB-203ENST00000415688 ERCC6Q03468 1493 aa8.94□□□□□ -0.98
STRADB-203ENST00000415688 C3orf80F5H4A9 247 aa8.93□□□□□ -0.98
STRADB-203ENST00000415688 LSM11P83369 360 aaKnown RBP eCLIP8.92□□□□□ -0.98
STRADB-203ENST00000415688 LAPTM4BQ86VI4 370 aa8.92□□□□□ -0.98
STRADB-203ENST00000415688 NBPF3Q9H094 633 aa8.92□□□□□ -0.98
STRADB-203ENST00000415688 TMEM134Q9H6X4 195 aa8.92□□□□□ -0.98
STRADB-203ENST00000415688 FAM217BQ9NTX9 383 aaPredicted RBP8.92□□□□□ -0.98
STRADB-203ENST00000415688 BHMG1C9JSJ3 638 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms