RNA–Protein interactions for RNA: ENST00000415688.1

STRADB-203, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-203ENST00000415688 AEBP2Q6ZN18 517 aaPredicted RBP20.32■□□□□ 0.84
STRADB-203ENST00000415688 CHIC1Q5VXU3 224 aa20.13■□□□□ 0.81
STRADB-203ENST00000415688 PHF23Q9BUL5 403 aaPredicted RBP17.68■□□□□ 0.42
STRADB-203ENST00000415688 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
STRADB-203ENST00000415688 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
STRADB-203ENST00000415688 FOXD1Q16676 465 aa15.96■□□□□ 0.15
STRADB-203ENST00000415688 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
STRADB-203ENST00000415688 ADRA2BP18089 450 aa15.5■□□□□ 0.07
STRADB-203ENST00000415688 PIAS4Q8N2W9 510 aaPredicted RBP15.11■□□□□ 0.01
STRADB-203ENST00000415688 MSH5O43196 834 aa14.7□□□□□ -0.06
STRADB-203ENST00000415688 PPP4R3CPQ6ZMV5 832 aa14.5□□□□□ -0.09
STRADB-203ENST00000415688 KCNA4P22459 653 aa14.39□□□□□ -0.11
STRADB-203ENST00000415688 SCAF1Q9H7N4 1312 aaKnown RBP14.29□□□□□ -0.12
STRADB-203ENST00000415688 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
STRADB-203ENST00000415688 CNKSR2Q8WXI2 1034 aa14.08□□□□□ -0.16
STRADB-203ENST00000415688 POTEDQ86YR6 584 aa14.07□□□□□ -0.16
STRADB-203ENST00000415688 NPM3O75607 178 aaKnown RBP13.98□□□□□ -0.17
STRADB-203ENST00000415688 MAPK8IP2Q13387 824 aaPredicted RBP13.98□□□□□ -0.17
STRADB-203ENST00000415688 DMRT2Q9Y5R5 561 aa13.82□□□□□ -0.2
STRADB-203ENST00000415688 SLC4A1APQ9BWU0 796 aaKnown RBP13.77□□□□□ -0.21
STRADB-203ENST00000415688 RNF216Q9NWF9 866 aaPredicted RBP13.76□□□□□ -0.21
STRADB-203ENST00000415688 DNAJC5BQ9UF47 199 aa13.66□□□□□ -0.22
STRADB-203ENST00000415688 HOXD11P31277 338 aaPredicted RBP13.64□□□□□ -0.23
STRADB-203ENST00000415688 EHMT2Q96KQ7 1210 aa13.57□□□□□ -0.24
STRADB-203ENST00000415688 CSRNP3Q8WYN3 585 aa13.37□□□□□ -0.27
STRADB-203ENST00000415688 ZBTB22O15209 634 aa13.23□□□□□ -0.29
STRADB-203ENST00000415688 FOXD4L1Q9NU39 408 aa13.23□□□□□ -0.29
STRADB-203ENST00000415688 DCAF8L1A6NGE4 600 aa13.14□□□□□ -0.31
STRADB-203ENST00000415688 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
STRADB-203ENST00000415688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.96□□□□□ -0.33
STRADB-203ENST00000415688 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
STRADB-203ENST00000415688 ATXN8OSP0DMR3 200 aa12.8□□□□□ -0.36
STRADB-203ENST00000415688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.77□□□□□ -0.37
STRADB-203ENST00000415688 HNRNPUL2Q1KMD3 747 aaKnown RBP12.77□□□□□ -0.37
STRADB-203ENST00000415688 U3KPZ7 1027 aaPredicted RBP12.77□□□□□ -0.37
STRADB-203ENST00000415688 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.37
STRADB-203ENST00000415688 APLP2Q06481 763 aa12.6□□□□□ -0.39
STRADB-203ENST00000415688 RNF39Q9H2S5 420 aa12.59□□□□□ -0.39
STRADB-203ENST00000415688 ATF5Q9Y2D1 282 aaPredicted RBP12.5□□□□□ -0.41
STRADB-203ENST00000415688 C1QBPQ07021 282 aaKnown RBP12.48□□□□□ -0.41
STRADB-203ENST00000415688 ZNF219Q9P2Y4 722 aaPredicted RBP12.35□□□□□ -0.43
STRADB-203ENST00000415688 SPINK5Q9NQ38 1064 aaPredicted RBP12.32□□□□□ -0.44
STRADB-203ENST00000415688 CAPN15O75808 1086 aa12.27□□□□□ -0.45
STRADB-203ENST00000415688 TRHP20396 242 aaPredicted RBP12.26□□□□□ -0.45
STRADB-203ENST00000415688 POLA2Q14181 598 aa12.13□□□□□ -0.47
STRADB-203ENST00000415688 CACNB1Q02641 598 aaPredicted RBP12.07□□□□□ -0.48
STRADB-203ENST00000415688 FKBP8Q14318 412 aa12.06□□□□□ -0.48
STRADB-203ENST00000415688 DSG3P32926 999 aa12.04□□□□□ -0.48
STRADB-203ENST00000415688 FBLN2P98095 1184 aa12.04□□□□□ -0.48
STRADB-203ENST00000415688 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
STRADB-203ENST00000415688 ABCB7O75027 752 aa12.02□□□□□ -0.49
STRADB-203ENST00000415688 MKRN4PQ13434 485 aaPredicted RBP12□□□□□ -0.49
STRADB-203ENST00000415688 SPDYE4A6NLX3 237 aa11.86□□□□□ -0.51
STRADB-203ENST00000415688 PROM2Q8N271 834 aa11.74□□□□□ -0.53
STRADB-203ENST00000415688 SPDYE2BA6NHP3 402 aa11.7□□□□□ -0.54
STRADB-203ENST00000415688 SPDYE6P0CI01 402 aa11.7□□□□□ -0.54
STRADB-203ENST00000415688 SPDYE2Q495Y8 402 aa11.7□□□□□ -0.54
STRADB-203ENST00000415688 OSCARQ8IYS5 282 aa11.7□□□□□ -0.54
STRADB-203ENST00000415688 ZNF692Q9BU19 519 aaPredicted RBP11.65□□□□□ -0.54
STRADB-203ENST00000415688 FBXO3Q9UK99 471 aa11.65□□□□□ -0.54
STRADB-203ENST00000415688 SSUH2Q9Y2M2 353 aa11.62□□□□□ -0.55
STRADB-203ENST00000415688 RBM42Q9BTD8 480 aaKnown RBP11.53□□□□□ -0.56
STRADB-203ENST00000415688 PABPN1Q86U42 306 aaKnown RBP eCLIP11.49□□□□□ -0.57
STRADB-203ENST00000415688 AMER1Q5JTC6 1135 aaPredicted RBP11.44□□□□□ -0.58
STRADB-203ENST00000415688 VASPP50552 380 aaPredicted RBP11.43□□□□□ -0.58
STRADB-203ENST00000415688 STAG3Q9UJ98 1225 aa11.42□□□□□ -0.58
STRADB-203ENST00000415688 AKT1S1Q96B36 256 aa11.41□□□□□ -0.58
STRADB-203ENST00000415688 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
STRADB-203ENST00000415688 SPDYE1Q8NFV5 336 aaPredicted RBP11.29□□□□□ -0.6
STRADB-203ENST00000415688 IFNLR1Q8IU57 520 aaPredicted RBP11.28□□□□□ -0.6
STRADB-203ENST00000415688 REM2Q8IYK8 340 aaPredicted RBP11.26□□□□□ -0.61
STRADB-203ENST00000415688 PLCD3Q8N3E9 789 aa11.22□□□□□ -0.61
STRADB-203ENST00000415688 MIER1Q8N108 512 aa11.21□□□□□ -0.61
STRADB-203ENST00000415688 PLEKHG5O94827 1062 aa11.2□□□□□ -0.62
STRADB-203ENST00000415688 KLHL34Q8N239 644 aa11.16□□□□□ -0.62
STRADB-203ENST00000415688 ZBTB47Q9UFB7 747 aaPredicted RBP11.16□□□□□ -0.62
STRADB-203ENST00000415688 CLEC11AQ9Y240 323 aa11.16□□□□□ -0.62
STRADB-203ENST00000415688 PRR29P0C7W0 189 aa11.13□□□□□ -0.63
STRADB-203ENST00000415688 SPOCK2Q92563 424 aa11.13□□□□□ -0.63
STRADB-203ENST00000415688 PITPNM1O00562 1244 aa11.12□□□□□ -0.63
STRADB-203ENST00000415688 CREBZFQ9NS37 354 aa11.04□□□□□ -0.64
STRADB-203ENST00000415688 PKD2Q13563 968 aa10.99□□□□□ -0.65
STRADB-203ENST00000415688 MNX1P50219 401 aaPredicted RBP10.97□□□□□ -0.65
STRADB-203ENST00000415688 NUBP1P53384 320 aa10.91□□□□□ -0.66
STRADB-203ENST00000415688 NPM1P06748 294 aaKnown RBP eCLIP10.9□□□□□ -0.66
STRADB-203ENST00000415688 FXR2P51116 673 aaKnown RBP eCLIP10.9□□□□□ -0.66
STRADB-203ENST00000415688 CHRDL2Q6WN34 429 aa10.9□□□□□ -0.66
STRADB-203ENST00000415688 GSE1Q14687 1217 aa10.89□□□□□ -0.67
STRADB-203ENST00000415688 TRIM41Q8WV44 630 aa10.89□□□□□ -0.67
STRADB-203ENST00000415688 ECM2O94769 699 aaPredicted RBP10.88□□□□□ -0.67
STRADB-203ENST00000415688 CIZ1Q9ULV3 898 aaPredicted RBP10.88□□□□□ -0.67
STRADB-203ENST00000415688 POTEHQ6S545 545 aa10.86□□□□□ -0.67
STRADB-203ENST00000415688 CHADLQ6NUI6 762 aa10.85□□□□□ -0.67
STRADB-203ENST00000415688 PRKAR2AP13861 404 aaKnown RBP10.84□□□□□ -0.67
STRADB-203ENST00000415688 FAM212AQ96EL1 285 aa10.84□□□□□ -0.67
STRADB-203ENST00000415688 FARP1Q9Y4F1 1045 aaPredicted RBP10.83□□□□□ -0.68
STRADB-203ENST00000415688 DCAF8Q5TAQ9 597 aa10.81□□□□□ -0.68
STRADB-203ENST00000415688 PIP4P2Q8N4L2 257 aa10.8□□□□□ -0.68
STRADB-203ENST00000415688 RASEFQ8IZ41 740 aa10.79□□□□□ -0.68
STRADB-203ENST00000415688 DCAF8L2P0C7V8 631 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms