RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 SETD1BQ9UPS6 1966 aaKnown RBP19.03■□□□□ 0.64
SSR4P1-201ENST00000415143 C9orf84Q5VXU9 1444 aa19.03■□□□□ 0.64
SSR4P1-201ENST00000415143 ANKRD30BQ9BXX2 1392 aa19.03■□□□□ 0.64
SSR4P1-201ENST00000415143 ANKRD50Q9ULJ7 1429 aa19.02■□□□□ 0.64
SSR4P1-201ENST00000415143 MYO5CQ9NQX4 1742 aa19.02■□□□□ 0.63
SSR4P1-201ENST00000415143 MAGI2Q86UL8 1455 aa19.02■□□□□ 0.63
SSR4P1-201ENST00000415143 PREX2Q70Z35 1606 aa19■□□□□ 0.63
SSR4P1-201ENST00000415143 RPRD2Q5VT52 1461 aaKnown RBP18.99■□□□□ 0.63
SSR4P1-201ENST00000415143 CCDC141Q6ZP82 1450 aa18.99■□□□□ 0.63
SSR4P1-201ENST00000415143 YTHDC1Q96MU7 727 aaKnown RBP18.99■□□□□ 0.63
SSR4P1-201ENST00000415143 PLCH2O75038 1416 aa18.99■□□□□ 0.63
SSR4P1-201ENST00000415143 SCAF1Q9H7N4 1312 aaKnown RBP18.99■□□□□ 0.63
SSR4P1-201ENST00000415143 KIAA1107Q9UPP5 1409 aa18.98■□□□□ 0.63
SSR4P1-201ENST00000415143 UBAP1LF5GYI3 381 aa18.95■□□□□ 0.62
SSR4P1-201ENST00000415143 EIF4G2P78344 907 aaKnown RBP eCLIP18.95■□□□□ 0.62
SSR4P1-201ENST00000415143 PZPP20742 1482 aa18.95■□□□□ 0.62
SSR4P1-201ENST00000415143 CDC42BPBQ9Y5S2 1711 aa18.94■□□□□ 0.62
SSR4P1-201ENST00000415143 DDX10Q13206 875 aaKnown RBP18.94■□□□□ 0.62
SSR4P1-201ENST00000415143 ATP10AO60312 1499 aa18.94■□□□□ 0.62
SSR4P1-201ENST00000415143 MBD5Q9P267 1494 aa18.94■□□□□ 0.62
SSR4P1-201ENST00000415143 ARHGAP5Q13017 1502 aa18.94■□□□□ 0.62
SSR4P1-201ENST00000415143 ANP32CO43423 234 aa18.93■□□□□ 0.62
SSR4P1-201ENST00000415143 HNRNPMP52272 730 aaKnown RBP eCLIP18.93■□□□□ 0.62
SSR4P1-201ENST00000415143 L3MBTL2Q969R5 705 aa18.93■□□□□ 0.62
SSR4P1-201ENST00000415143 KIF15Q9NS87 1388 aa18.93■□□□□ 0.62
SSR4P1-201ENST00000415143 KDM5DQ9BY66 1539 aa18.92■□□□□ 0.62
SSR4P1-201ENST00000415143 EFCAB2Q5VUJ9 269 aa18.92■□□□□ 0.62
SSR4P1-201ENST00000415143 MED1Q15648 1581 aaPredicted RBP18.92■□□□□ 0.62
SSR4P1-201ENST00000415143 MAST1Q9Y2H9 1570 aa18.92■□□□□ 0.62
SSR4P1-201ENST00000415143 NUP155O75694 1391 aa18.91■□□□□ 0.62
SSR4P1-201ENST00000415143 SCAPERQ9BY12 1400 aa18.91■□□□□ 0.62
SSR4P1-201ENST00000415143 SAMD9LQ8IVG5 1584 aa18.9■□□□□ 0.62
SSR4P1-201ENST00000415143 C3P01024 1663 aa18.89■□□□□ 0.61
SSR4P1-201ENST00000415143 CCER2I3L3R5 266 aa18.89■□□□□ 0.61
SSR4P1-201ENST00000415143 PKD2Q13563 968 aa18.89■□□□□ 0.61
SSR4P1-201ENST00000415143 FOXD1Q16676 465 aa18.88■□□□□ 0.61
SSR4P1-201ENST00000415143 GTF3C3Q9Y5Q9 886 aa18.87■□□□□ 0.61
SSR4P1-201ENST00000415143 HSPA5P11021 654 aaKnown RBP18.85■□□□□ 0.61
SSR4P1-201ENST00000415143 ZNF335Q9H4Z2 1342 aaPredicted RBP18.84■□□□□ 0.61
SSR4P1-201ENST00000415143 SYCP2Q9BX26 1530 aa18.83■□□□□ 0.6
SSR4P1-201ENST00000415143 PLXNC1O60486 1568 aa18.81■□□□□ 0.6
SSR4P1-201ENST00000415143 TRAPPC8Q9Y2L5 1435 aa18.81■□□□□ 0.6
SSR4P1-201ENST00000415143 CAMSAP1Q5T5Y3 1602 aa18.81■□□□□ 0.6
SSR4P1-201ENST00000415143 ABCC1P33527 1531 aa18.8■□□□□ 0.6
SSR4P1-201ENST00000415143 HSPA1LP34931 641 aa18.8■□□□□ 0.6
SSR4P1-201ENST00000415143 HIRIP3Q9BW71 556 aaPredicted RBP18.8■□□□□ 0.6
SSR4P1-201ENST00000415143 DUOX2Q9NRD8 1548 aa18.79■□□□□ 0.6
SSR4P1-201ENST00000415143 PHF23Q9BUL5 403 aaPredicted RBP18.79■□□□□ 0.6
SSR4P1-201ENST00000415143 ESF1Q9H501 851 aaKnown RBP18.78■□□□□ 0.6
SSR4P1-201ENST00000415143 ERBINQ96RT1 1412 aa18.77■□□□□ 0.6
SSR4P1-201ENST00000415143 MYT1LQ9UL68 1186 aa18.77■□□□□ 0.6
SSR4P1-201ENST00000415143 KDM5CP41229 1560 aa18.76■□□□□ 0.59
SSR4P1-201ENST00000415143 NCKAP5LQ9HCH0 1330 aa18.76■□□□□ 0.59
SSR4P1-201ENST00000415143 RTEL1-TNFRSF6BF6WH68 1400 aa18.76■□□□□ 0.59
SSR4P1-201ENST00000415143 ZNF518AQ6AHZ1 1483 aa18.76■□□□□ 0.59
SSR4P1-201ENST00000415143 PIP4K2BP78356 416 aa18.75■□□□□ 0.59
SSR4P1-201ENST00000415143 DIP2CQ9Y2E4 1556 aa18.75■□□□□ 0.59
SSR4P1-201ENST00000415143 UNC13BO14795 1591 aa18.74■□□□□ 0.59
SSR4P1-201ENST00000415143 NBPF8Q3BBV2 869 aa18.74■□□□□ 0.59
SSR4P1-201ENST00000415143 FAM135AQ9P2D6 1515 aa18.74■□□□□ 0.59
SSR4P1-201ENST00000415143 AFAP1Q8N556 730 aa18.72■□□□□ 0.59
SSR4P1-201ENST00000415143 REREQ9P2R6 1566 aa18.71■□□□□ 0.59
SSR4P1-201ENST00000415143 SPAG9O60271 1321 aaKnown RBP18.71■□□□□ 0.59
SSR4P1-201ENST00000415143 ABCA6Q8N139 1617 aa18.71■□□□□ 0.58
SSR4P1-201ENST00000415143 WASHC2AQ641Q2 1341 aa18.7■□□□□ 0.58
SSR4P1-201ENST00000415143 CCDC7Q96M83 1385 aa18.69■□□□□ 0.58
SSR4P1-201ENST00000415143 CCDC144AA2RUR9 1427 aa18.69■□□□□ 0.58
SSR4P1-201ENST00000415143 MLH3Q9UHC1 1453 aa18.69■□□□□ 0.58
SSR4P1-201ENST00000415143 CNTLNQ9NXG0 1405 aa18.68■□□□□ 0.58
SSR4P1-201ENST00000415143 AGLP35573 1532 aa18.68■□□□□ 0.58
SSR4P1-201ENST00000415143 SPATA31E1Q6ZUB1 1445 aa18.67■□□□□ 0.58
SSR4P1-201ENST00000415143 IQGAP3Q86VI3 1631 aa18.67■□□□□ 0.58
SSR4P1-201ENST00000415143 KIDINS220Q9ULH0 1771 aa18.66■□□□□ 0.58
SSR4P1-201ENST00000415143 RALGAPBQ86X10 1494 aa18.65■□□□□ 0.58
SSR4P1-201ENST00000415143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.65■□□□□ 0.58
SSR4P1-201ENST00000415143 TOM1O60784 492 aa18.64■□□□□ 0.57
SSR4P1-201ENST00000415143 NPATQ14207 1427 aa18.64■□□□□ 0.57
SSR4P1-201ENST00000415143 PPP6R1Q9UPN7 881 aa18.63■□□□□ 0.57
SSR4P1-201ENST00000415143 USP47Q96K76 1375 aa18.63■□□□□ 0.57
SSR4P1-201ENST00000415143 ZNF326Q5BKZ1 582 aaKnown RBP18.62■□□□□ 0.57
SSR4P1-201ENST00000415143 STAC3Q96MF2 364 aa18.62■□□□□ 0.57
SSR4P1-201ENST00000415143 ROCK2O75116 1388 aaKnown RBP18.62■□□□□ 0.57
SSR4P1-201ENST00000415143 KANK1Q14678 1352 aa18.62■□□□□ 0.57
SSR4P1-201ENST00000415143 PLA2R1Q13018 1463 aa18.62■□□□□ 0.57
SSR4P1-201ENST00000415143 MROH2AA6NES4 1674 aa18.62■□□□□ 0.57
SSR4P1-201ENST00000415143 ZNF142P52746 1687 aaPredicted RBP18.62■□□□□ 0.57
SSR4P1-201ENST00000415143 MYO3AQ8NEV4 1616 aa18.61■□□□□ 0.57
SSR4P1-201ENST00000415143 INO80Q9ULG1 1556 aaPredicted RBP18.61■□□□□ 0.57
SSR4P1-201ENST00000415143 DCAF11Q8TEB1 546 aa18.61■□□□□ 0.57
SSR4P1-201ENST00000415143 POLR1AO95602 1720 aaPredicted RBP18.6■□□□□ 0.57
SSR4P1-201ENST00000415143 CARD11Q9BXL7 1154 aa18.6■□□□□ 0.57
SSR4P1-201ENST00000415143 ATP7AQ04656 1500 aa18.59■□□□□ 0.57
SSR4P1-201ENST00000415143 CEP170BQ9Y4F5 1589 aaPredicted RBP18.58■□□□□ 0.56
SSR4P1-201ENST00000415143 ZMYM3Q14202 1370 aa18.57■□□□□ 0.56
SSR4P1-201ENST00000415143 KIF7Q2M1P5 1343 aa18.57■□□□□ 0.56
SSR4P1-201ENST00000415143 SENP3Q9H4L4 574 aaPredicted RBP18.57■□□□□ 0.56
SSR4P1-201ENST00000415143 PELP1Q8IZL8 1130 aaKnown RBP18.56■□□□□ 0.56
SSR4P1-201ENST00000415143 KDM2AQ9Y2K7 1162 aa18.56■□□□□ 0.56
SSR4P1-201ENST00000415143 CPS1P31327 1500 aa18.55■□□□□ 0.56
SSR4P1-201ENST00000415143 CLTCQ00610 1675 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms