RNA–Protein interactions for RNA: ENST00000414887.1

SNX3P1X-201, Transcript of sorting nexin 3 pseudogene 1 X-linked, humanhuman

BASIC

Gene SNX3P1X, Length 175 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3P1X-201ENST00000414887 TENM2Q9NT68 2774 aa0.57□□□□□ -2.32
SNX3P1X-201ENST00000414887 HERC2O95714 4834 aa0.57□□□□□ -2.32
SNX3P1X-201ENST00000414887 UTP20O75691 2785 aaKnown RBP0.57□□□□□ -2.32
SNX3P1X-201ENST00000414887 TLN1Q9Y490 2541 aaKnown RBP0.56□□□□□ -2.32
SNX3P1X-201ENST00000414887 WIPF1O43516 503 aa0.56□□□□□ -2.32
SNX3P1X-201ENST00000414887 KCNC3Q14003 757 aa0.56□□□□□ -2.32
SNX3P1X-201ENST00000414887 ALYREFQ86V81 257 aaKnown RBP0.56□□□□□ -2.32
SNX3P1X-201ENST00000414887 FUBP1Q96AE4 644 aaKnown RBP0.56□□□□□ -2.32
SNX3P1X-201ENST00000414887 KCNK4Q9NYG8 393 aa0.56□□□□□ -2.32
SNX3P1X-201ENST00000414887 ARIH1Q9Y4X5 557 aaPredicted RBP0.56□□□□□ -2.32
SNX3P1X-201ENST00000414887 CNOT1A5YKK6 2376 aaKnown RBP0.56□□□□□ -2.32
SNX3P1X-201ENST00000414887 UBR5O95071 2799 aaPredicted RBP0.56□□□□□ -2.32
SNX3P1X-201ENST00000414887 TEX15Q9BXT5 2789 aa0.56□□□□□ -2.32
SNX3P1X-201ENST00000414887 TLN2Q9Y4G6 2542 aa0.56□□□□□ -2.32
SNX3P1X-201ENST00000414887 COL24A1Q17RW2 1714 aa0.55□□□□□ -2.32
SNX3P1X-201ENST00000414887 PCNX1Q96RV3 2341 aa0.55□□□□□ -2.32
SNX3P1X-201ENST00000414887 CFAP46Q8IYW2 2715 aa0.55□□□□□ -2.32
SNX3P1X-201ENST00000414887 RIF1Q5UIP0 2472 aaKnown RBP0.55□□□□□ -2.32
SNX3P1X-201ENST00000414887 KRTAP2-3P0C7H8 128 aa0.55□□□□□ -2.32
SNX3P1X-201ENST00000414887 PRB4P10163 310 aaPredicted RBP0.55□□□□□ -2.32
SNX3P1X-201ENST00000414887 PRPF38BQ5VTL8 546 aaKnown RBP0.55□□□□□ -2.32
SNX3P1X-201ENST00000414887 KRTAP5-3Q6L8H2 238 aa0.55□□□□□ -2.32
SNX3P1X-201ENST00000414887 OSCARQ8IYS5 282 aa0.55□□□□□ -2.32
SNX3P1X-201ENST00000414887 EDAQ92838 391 aa0.55□□□□□ -2.32
SNX3P1X-201ENST00000414887 KRTAP2-4Q9BYR9 128 aa0.55□□□□□ -2.32
SNX3P1X-201ENST00000414887 AATKQ6ZMQ8 1374 aa0.55□□□□□ -2.32
SNX3P1X-201ENST00000414887 DMBT1Q9UGM3 2413 aaPredicted RBP0.55□□□□□ -2.32
SNX3P1X-201ENST00000414887 ITPR1Q14643 2758 aa0.55□□□□□ -2.32
SNX3P1X-201ENST00000414887 SPTAN1Q13813 2472 aaKnown RBP0.55□□□□□ -2.32
SNX3P1X-201ENST00000414887 MED14O60244 1454 aa0.54□□□□□ -2.32
SNX3P1X-201ENST00000414887 HMGXB3Q12766 1538 aa0.54□□□□□ -2.32
SNX3P1X-201ENST00000414887 EYSQ5T1H1 3165 aa0.54□□□□□ -2.32
SNX3P1X-201ENST00000414887 ACANP16112 2415 aa0.54□□□□□ -2.32
SNX3P1X-201ENST00000414887 COL9A3Q14050 684 aaPredicted RBP0.54□□□□□ -2.32
SNX3P1X-201ENST00000414887 RALYQ9UKM9 306 aaKnown RBP0.54□□□□□ -2.32
SNX3P1X-201ENST00000414887 TENM3Q9P273 2699 aa0.54□□□□□ -2.32
SNX3P1X-201ENST00000414887 KRTAP9-6A8MVA2 160 aa0.53□□□□□ -2.32
SNX3P1X-201ENST00000414887 SYNCRIPO60506 623 aaKnown RBP0.53□□□□□ -2.32
SNX3P1X-201ENST00000414887 HABP4Q5JVS0 413 aaKnown RBP0.53□□□□□ -2.32
SNX3P1X-201ENST00000414887 DNAJC5GQ8N7S2 189 aa0.53□□□□□ -2.32
SNX3P1X-201ENST00000414887 USP19O94966 1318 aa0.53□□□□□ -2.32
SNX3P1X-201ENST00000414887 SETBP1Q9Y6X0 1596 aa0.53□□□□□ -2.33
SNX3P1X-201ENST00000414887 MKI67P46013 3256 aaKnown RBP0.53□□□□□ -2.33
SNX3P1X-201ENST00000414887 MGAM2Q2M2H8 2515 aa0.53□□□□□ -2.33
SNX3P1X-201ENST00000414887 MXRA5Q9NR99 2828 aa0.52□□□□□ -2.33
SNX3P1X-201ENST00000414887 RANBP2P49792 3224 aaKnown RBP0.52□□□□□ -2.33
SNX3P1X-201ENST00000414887 SPEGQ15772 3267 aa0.52□□□□□ -2.33
SNX3P1X-201ENST00000414887 IGF2RP11717 2491 aa0.52□□□□□ -2.33
SNX3P1X-201ENST00000414887 LUC7L3O95232 432 aaKnown RBP0.52□□□□□ -2.33
SNX3P1X-201ENST00000414887 FXR1P51114 621 aaKnown RBP eCLIP0.52□□□□□ -2.33
SNX3P1X-201ENST00000414887 KRTAP9-9Q9BYP9 154 aa0.52□□□□□ -2.33
SNX3P1X-201ENST00000414887 COL4A3Q01955 1670 aa0.52□□□□□ -2.33
SNX3P1X-201ENST00000414887 CACNA1HO95180 2353 aa0.52□□□□□ -2.33
SNX3P1X-201ENST00000414887 DNAH12Q6ZR08 3092 aa0.51□□□□□ -2.33
SNX3P1X-201ENST00000414887 LAMA3Q16787 3333 aa0.51□□□□□ -2.33
SNX3P1X-201ENST00000414887 USH2AO75445 5202 aa0.51□□□□□ -2.33
SNX3P1X-201ENST00000414887 HSPA6P17066 643 aa0.51□□□□□ -2.33
SNX3P1X-201ENST00000414887 PHF23Q9BUL5 403 aaPredicted RBP0.51□□□□□ -2.33
SNX3P1X-201ENST00000414887 ZDBF2Q9HCK1 2354 aa0.51□□□□□ -2.33
SNX3P1X-201ENST00000414887 COL12A1Q99715 3063 aa0.5□□□□□ -2.33
SNX3P1X-201ENST00000414887 SIX3O95343 332 aaPredicted RBP0.5□□□□□ -2.33
SNX3P1X-201ENST00000414887 MAP3K12Q12852 859 aa0.5□□□□□ -2.33
SNX3P1X-201ENST00000414887 LCE2DQ5TA82 110 aaPredicted RBP0.5□□□□□ -2.33
SNX3P1X-201ENST00000414887 NKX2-3Q8TAU0 364 aa0.5□□□□□ -2.33
SNX3P1X-201ENST00000414887 PIK3R5Q8WYR1 880 aa0.5□□□□□ -2.33
SNX3P1X-201ENST00000414887 CAMKK2Q96RR4 588 aa0.5□□□□□ -2.33
SNX3P1X-201ENST00000414887 KRTAP9-4Q9BYQ2 154 aa0.5□□□□□ -2.33
SNX3P1X-201ENST00000414887 TPRP12270 2363 aaKnown RBP0.5□□□□□ -2.33
SNX3P1X-201ENST00000414887 CEP250Q9BV73 2442 aa0.49□□□□□ -2.33
SNX3P1X-201ENST00000414887 SOBPA7XYQ1 873 aa0.49□□□□□ -2.33
SNX3P1X-201ENST00000414887 POTECB2RU33 542 aa0.49□□□□□ -2.33
SNX3P1X-201ENST00000414887 ZNF513Q8N8E2 541 aaPredicted RBP0.49□□□□□ -2.33
SNX3P1X-201ENST00000414887 JMYQ8N9B5 988 aa0.49□□□□□ -2.33
SNX3P1X-201ENST00000414887 FAM98AQ8NCA5 519 aaKnown RBP0.49□□□□□ -2.33
SNX3P1X-201ENST00000414887 GCC1Q96CN9 775 aa0.49□□□□□ -2.33
SNX3P1X-201ENST00000414887 KRTAP2-2Q9BYT5 123 aa0.49□□□□□ -2.33
SNX3P1X-201ENST00000414887 KRTAP2-1Q9BYU5 128 aa0.49□□□□□ -2.33
SNX3P1X-201ENST00000414887 FER1L4A9Z1Z3 1794 aa0.48□□□□□ -2.33
SNX3P1X-201ENST00000414887 BHMG1C9JSJ3 638 aaPredicted RBP0.48□□□□□ -2.33
SNX3P1X-201ENST00000414887 GIGYF1O75420 1035 aaPredicted RBP0.48□□□□□ -2.33
SNX3P1X-201ENST00000414887 KRTAP6-3Q3LI67 103 aa0.48□□□□□ -2.33
SNX3P1X-201ENST00000414887 POTEDQ86YR6 584 aa0.48□□□□□ -2.33
SNX3P1X-201ENST00000414887 MDFIQ99750 246 aa0.48□□□□□ -2.33
SNX3P1X-201ENST00000414887 ZRANB1Q9UGI0 708 aa0.48□□□□□ -2.33
SNX3P1X-201ENST00000414887 MTORP42345 2549 aa0.48□□□□□ -2.33
SNX3P1X-201ENST00000414887 ATRNO75882 1429 aa0.47□□□□□ -2.33
SNX3P1X-201ENST00000414887 TGP01266 2768 aa0.47□□□□□ -2.33
SNX3P1X-201ENST00000414887 COL7A1Q02388 2944 aa0.47□□□□□ -2.33
SNX3P1X-201ENST00000414887 MRE11P49959 708 aa0.47□□□□□ -2.33
SNX3P1X-201ENST00000414887 NFATC2IPQ8NCF5 419 aa0.47□□□□□ -2.33
SNX3P1X-201ENST00000414887 KRTAP4-6Q9BYQ5 205 aa0.47□□□□□ -2.33
SNX3P1X-201ENST00000414887 KRTAP4-7Q9BYR0 210 aa0.47□□□□□ -2.33
SNX3P1X-201ENST00000414887 RELNP78509 3460 aa0.47□□□□□ -2.33
SNX3P1X-201ENST00000414887 ARHGEF11O15085 1522 aa0.47□□□□□ -2.33
SNX3P1X-201ENST00000414887 TSPOAP1O95153 1857 aa0.46□□□□□ -2.34
SNX3P1X-201ENST00000414887 EP400Q96L91 3159 aa0.46□□□□□ -2.34
SNX3P1X-201ENST00000414887 KRTAP5-5Q701N2 237 aaPredicted RBP0.46□□□□□ -2.34
SNX3P1X-201ENST00000414887 LSRQ86X29 649 aaPredicted RBP0.46□□□□□ -2.34
SNX3P1X-201ENST00000414887 CELSR1Q9NYQ6 3014 aa0.46□□□□□ -2.34
SNX3P1X-201ENST00000414887 UNC80Q8N2C7 3258 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms