RNA–Protein interactions for RNA: ENST00000414487.6

SNRPE-202, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPE, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-202ENST00000414487 ARHGEF5Q12774 1597 aa12.9□□□□□ -0.34
SNRPE-202ENST00000414487 SPATA31E1Q6ZUB1 1445 aa12.9□□□□□ -0.34
SNRPE-202ENST00000414487 POLR1AO95602 1720 aaPredicted RBP12.9□□□□□ -0.34
SNRPE-202ENST00000414487 PLEKHD1A6NEE1 506 aa12.89□□□□□ -0.35
SNRPE-202ENST00000414487 NEFLP07196 543 aa12.88□□□□□ -0.35
SNRPE-202ENST00000414487 NBPF8Q3BBV2 869 aa12.88□□□□□ -0.35
SNRPE-202ENST00000414487 C9orf84Q5VXU9 1444 aa12.88□□□□□ -0.35
SNRPE-202ENST00000414487 ANKRD50Q9ULJ7 1429 aa12.88□□□□□ -0.35
SNRPE-202ENST00000414487 MYT1Q01538 1121 aa12.86□□□□□ -0.35
SNRPE-202ENST00000414487 EVX2Q03828 476 aa12.86□□□□□ -0.35
SNRPE-202ENST00000414487 ARHGEF12Q9NZN5 1544 aa12.86□□□□□ -0.35
SNRPE-202ENST00000414487 UHRF1BP1Q6BDS2 1440 aa12.85□□□□□ -0.35
SNRPE-202ENST00000414487 PTPRGP23470 1445 aa12.84□□□□□ -0.35
SNRPE-202ENST00000414487 FKBP8Q14318 412 aa12.83□□□□□ -0.36
SNRPE-202ENST00000414487 ZNF777Q9ULD5 760 aaPredicted RBP12.83□□□□□ -0.36
SNRPE-202ENST00000414487 PREX2Q70Z35 1606 aa12.83□□□□□ -0.36
SNRPE-202ENST00000414487 SHROOM2Q13796 1616 aa12.82□□□□□ -0.36
SNRPE-202ENST00000414487 PKD2Q13563 968 aa12.82□□□□□ -0.36
SNRPE-202ENST00000414487 CCDC141Q6ZP82 1450 aa12.82□□□□□ -0.36
SNRPE-202ENST00000414487 RALGAPBQ86X10 1494 aa12.82□□□□□ -0.36
SNRPE-202ENST00000414487 C11orf95C9JLR9 678 aaPredicted RBP12.81□□□□□ -0.36
SNRPE-202ENST00000414487 PRR29P0C7W0 189 aa12.81□□□□□ -0.36
SNRPE-202ENST00000414487 TSHZ2Q9NRE2 1034 aa12.81□□□□□ -0.36
SNRPE-202ENST00000414487 KIF7Q2M1P5 1343 aa12.81□□□□□ -0.36
SNRPE-202ENST00000414487 ARID4BQ4LE39 1312 aaPredicted RBP12.81□□□□□ -0.36
SNRPE-202ENST00000414487 MAST1Q9Y2H9 1570 aa12.81□□□□□ -0.36
SNRPE-202ENST00000414487 CHADLQ6NUI6 762 aa12.8□□□□□ -0.36
SNRPE-202ENST00000414487 PRKRIP1Q9H875 184 aaPredicted RBP12.8□□□□□ -0.36
SNRPE-202ENST00000414487 SAMD9LQ8IVG5 1584 aa12.8□□□□□ -0.36
SNRPE-202ENST00000414487 KIF15Q9NS87 1388 aa12.8□□□□□ -0.36
SNRPE-202ENST00000414487 KDM5CP41229 1560 aa12.79□□□□□ -0.36
SNRPE-202ENST00000414487 RSPH4AQ5TD94 716 aa12.79□□□□□ -0.36
SNRPE-202ENST00000414487 NUP155O75694 1391 aa12.79□□□□□ -0.36
SNRPE-202ENST00000414487 TSPY4P0CV99 314 aa12.78□□□□□ -0.36
SNRPE-202ENST00000414487 TSPY10P0CW01 314 aa12.78□□□□□ -0.36
SNRPE-202ENST00000414487 HNRNPUQ00839 825 aaKnown RBP eCLIP12.78□□□□□ -0.36
SNRPE-202ENST00000414487 USP47Q96K76 1375 aa12.78□□□□□ -0.36
SNRPE-202ENST00000414487 CHD1O14646 1710 aa12.77□□□□□ -0.36
SNRPE-202ENST00000414487 CDC42BPBQ9Y5S2 1711 aa12.76□□□□□ -0.37
SNRPE-202ENST00000414487 C19orf67A6NJJ6 358 aa12.76□□□□□ -0.37
SNRPE-202ENST00000414487 ROCK2O75116 1388 aaKnown RBP12.76□□□□□ -0.37
SNRPE-202ENST00000414487 PLEKHH2Q8IVE3 1493 aa12.76□□□□□ -0.37
SNRPE-202ENST00000414487 UNC13BO14795 1591 aa12.75□□□□□ -0.37
SNRPE-202ENST00000414487 ABCC2Q92887 1545 aa12.75□□□□□ -0.37
SNRPE-202ENST00000414487 BCORL1Q5H9F3 1711 aa12.74□□□□□ -0.37
SNRPE-202ENST00000414487 PLXNC1O60486 1568 aa12.74□□□□□ -0.37
SNRPE-202ENST00000414487 DHX29Q7Z478 1369 aaKnown RBP12.74□□□□□ -0.37
SNRPE-202ENST00000414487 ERICH6BQ5W0A0 696 aa12.74□□□□□ -0.37
SNRPE-202ENST00000414487 BCANQ96GW7 911 aa12.74□□□□□ -0.37
SNRPE-202ENST00000414487 FAM135AQ9P2D6 1515 aa12.72□□□□□ -0.37
SNRPE-202ENST00000414487 ZBED9Q6R2W3 1325 aa12.72□□□□□ -0.37
SNRPE-202ENST00000414487 HNRNPMP52272 730 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNRPE-202ENST00000414487 MRS2Q9HD23 443 aa12.72□□□□□ -0.37
SNRPE-202ENST00000414487 TTC37Q6PGP7 1564 aa12.72□□□□□ -0.37
SNRPE-202ENST00000414487 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.72□□□□□ -0.375e-19■□□□□ 9.3
SNRPE-202ENST00000414487 ARHGAP5Q13017 1502 aa12.71□□□□□ -0.38
SNRPE-202ENST00000414487 SYCP2Q9BX26 1530 aa12.71□□□□□ -0.38
SNRPE-202ENST00000414487 SPDYE4A6NLX3 237 aa12.7□□□□□ -0.38
SNRPE-202ENST00000414487 CCDC184Q52MB2 194 aa12.7□□□□□ -0.38
SNRPE-202ENST00000414487 MYO5CQ9NQX4 1742 aa12.7□□□□□ -0.38
SNRPE-202ENST00000414487 UHRF1BP1LA0JNW5 1464 aa12.69□□□□□ -0.38
SNRPE-202ENST00000414487 IQGAP3Q86VI3 1631 aa12.69□□□□□ -0.38
SNRPE-202ENST00000414487 LAMC1P11047 1609 aa12.68□□□□□ -0.38
SNRPE-202ENST00000414487 DUOX2Q9NRD8 1548 aa12.67□□□□□ -0.38
SNRPE-202ENST00000414487 MAGI2Q86UL8 1455 aa12.67□□□□□ -0.38
SNRPE-202ENST00000414487 KTN1Q86UP2 1357 aaKnown RBP12.67□□□□□ -0.38
SNRPE-202ENST00000414487 CLASP1Q7Z460 1538 aa12.67□□□□□ -0.38
SNRPE-202ENST00000414487 ZNF326Q5BKZ1 582 aaKnown RBP12.66□□□□□ -0.38
SNRPE-202ENST00000414487 TRPM1Q7Z4N2 1603 aa12.66□□□□□ -0.38
SNRPE-202ENST00000414487 ATP10AO60312 1499 aa12.65□□□□□ -0.38
SNRPE-202ENST00000414487 CCDC144AA2RUR9 1427 aa12.65□□□□□ -0.38
SNRPE-202ENST00000414487 PRAG1Q86YV5 1406 aa12.65□□□□□ -0.38
SNRPE-202ENST00000414487 ERBINQ96RT1 1412 aa12.65□□□□□ -0.38
SNRPE-202ENST00000414487 E9PCH4 1651 aa12.65□□□□□ -0.38
SNRPE-202ENST00000414487 CARD11Q9BXL7 1154 aa12.65□□□□□ -0.38
SNRPE-202ENST00000414487 GPRASP1Q5JY77 1395 aa12.65□□□□□ -0.38
SNRPE-202ENST00000414487 ERCC6L2Q5T890 1561 aa12.64□□□□□ -0.39
SNRPE-202ENST00000414487 FAM9BQ8IZU0 186 aa12.64□□□□□ -0.39
SNRPE-202ENST00000414487 PLA2R1Q13018 1463 aa12.64□□□□□ -0.39
SNRPE-202ENST00000414487 PLCH2O75038 1416 aa12.63□□□□□ -0.39
SNRPE-202ENST00000414487 SMG6Q86US8 1419 aaKnown RBP12.63□□□□□ -0.39
SNRPE-202ENST00000414487 ARAP3Q8WWN8 1544 aa12.63□□□□□ -0.39
SNRPE-202ENST00000414487 ABCC1P33527 1531 aa12.62□□□□□ -0.39
SNRPE-202ENST00000414487 ZCCHC11Q5TAX3 1644 aaKnown RBP12.62□□□□□ -0.39
SNRPE-202ENST00000414487 EIF2AK4Q9P2K8 1649 aaKnown RBP12.62□□□□□ -0.39
SNRPE-202ENST00000414487 A2MP01023 1474 aa12.61□□□□□ -0.39
SNRPE-202ENST00000414487 PPP4R2Q9NY27 417 aa12.61□□□□□ -0.39
SNRPE-202ENST00000414487 FARP1Q9Y4F1 1045 aaPredicted RBP12.61□□□□□ -0.39
SNRPE-202ENST00000414487 BRD4O60885 1362 aaPredicted RBP12.6□□□□□ -0.39
SNRPE-202ENST00000414487 DCAF11Q8TEB1 546 aa12.6□□□□□ -0.39
SNRPE-202ENST00000414487 PRDM15P57071 1507 aaPredicted RBP12.59□□□□□ -0.39
SNRPE-202ENST00000414487 EFCAB2Q5VUJ9 269 aa12.59□□□□□ -0.39
SNRPE-202ENST00000414487 ST20-MTHFSA0A0A6YYL1 179 aa12.58□□□□□ -0.4
SNRPE-202ENST00000414487 RTEL1-TNFRSF6BF6WH68 1400 aa12.58□□□□□ -0.4
SNRPE-202ENST00000414487 RALBP1Q15311 655 aa12.58□□□□□ -0.4
SNRPE-202ENST00000414487 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
SNRPE-202ENST00000414487 KDM2AQ9Y2K7 1162 aa12.58□□□□□ -0.4
SNRPE-202ENST00000414487 COL17A1Q9UMD9 1497 aaPredicted RBP12.58□□□□□ -0.4
SNRPE-202ENST00000414487 LRPPRCP42704 1394 aaKnown RBP12.57□□□□□ -0.4
SNRPE-202ENST00000414487 POLR3GLQ9BT43 218 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms