RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 CHMP7Q8WUX9 453 aaPredicted RBP11.43□□□□□ -0.58
LINC00343-201ENST00000414368 ZFP91Q96JP5 570 aaPredicted RBP11.43□□□□□ -0.58
LINC00343-201ENST00000414368 PBX2P40425 430 aa11.42□□□□□ -0.58
LINC00343-201ENST00000414368 STK24Q9Y6E0 443 aa11.42□□□□□ -0.58
LINC00343-201ENST00000414368 SYNJ2O15056 1496 aa11.41□□□□□ -0.58
LINC00343-201ENST00000414368 ADAMTS12P58397 1594 aa11.41□□□□□ -0.58
LINC00343-201ENST00000414368 FAM9AQ8IZU1 332 aaPredicted RBP11.4□□□□□ -0.58
LINC00343-201ENST00000414368 BCL11BQ9C0K0 894 aaPredicted RBP11.4□□□□□ -0.58
LINC00343-201ENST00000414368 FHAD1B1AJZ9 1412 aa11.39□□□□□ -0.59
LINC00343-201ENST00000414368 KHSRPQ92945 711 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINC00343-201ENST00000414368 RGS20O76081 388 aa11.38□□□□□ -0.59
LINC00343-201ENST00000414368 DNAJC5Q9H3Z4 198 aa11.38□□□□□ -0.59
LINC00343-201ENST00000414368 MICALL2Q8IY33 904 aa11.37□□□□□ -0.59
LINC00343-201ENST00000414368 CARMIL1Q5VZK9 1371 aa11.37□□□□□ -0.59
LINC00343-201ENST00000414368 GRIN2AQ12879 1464 aa11.37□□□□□ -0.59
LINC00343-201ENST00000414368 AXIN2Q9Y2T1 843 aa11.36□□□□□ -0.59
LINC00343-201ENST00000414368 CUL7Q14999 1698 aa11.36□□□□□ -0.59
LINC00343-201ENST00000414368 POTEEQ6S8J3 1075 aa11.32□□□□□ -0.6
LINC00343-201ENST00000414368 CEP170Q5SW79 1584 aa11.32□□□□□ -0.6
LINC00343-201ENST00000414368 NKX1-1Q15270 411 aaPredicted RBP11.31□□□□□ -0.6
LINC00343-201ENST00000414368 VSIG10Q8N0Z9 540 aa11.31□□□□□ -0.6
LINC00343-201ENST00000414368 EEA1Q15075 1411 aa11.3□□□□□ -0.6
LINC00343-201ENST00000414368 RYDENQ9NUL5 291 aaKnown RBP11.3□□□□□ -0.6
LINC00343-201ENST00000414368 RAPGEF2Q9Y4G8 1499 aa11.3□□□□□ -0.6
LINC00343-201ENST00000414368 NUP160Q12769 1436 aa11.29□□□□□ -0.6
LINC00343-201ENST00000414368 ADGRD1Q6QNK2 874 aa11.29□□□□□ -0.6
LINC00343-201ENST00000414368 PRXQ9BXM0 1461 aa11.29□□□□□ -0.6
LINC00343-201ENST00000414368 CLASP1Q7Z460 1538 aa11.29□□□□□ -0.6
LINC00343-201ENST00000414368 EFCAB3Q8N7B9 438 aa11.28□□□□□ -0.6
LINC00343-201ENST00000414368 TSHZ2Q9NRE2 1034 aa11.26□□□□□ -0.61
LINC00343-201ENST00000414368 GTPBP6O43824 516 aaPredicted RBP11.25□□□□□ -0.61
LINC00343-201ENST00000414368 NUDT7P0C024 238 aa11.23□□□□□ -0.61
LINC00343-201ENST00000414368 RIMBP3CA6NJZ7 1639 aa11.22□□□□□ -0.61
LINC00343-201ENST00000414368 RIMBP3BA6NNM3 1639 aa11.22□□□□□ -0.61
LINC00343-201ENST00000414368 KCTD12Q96CX2 325 aaKnown RBP11.22□□□□□ -0.61
LINC00343-201ENST00000414368 JPH4Q96JJ6 628 aa11.22□□□□□ -0.61
LINC00343-201ENST00000414368 KIAA0586Q9BVV6 1533 aa11.22□□□□□ -0.61
LINC00343-201ENST00000414368 RIMBP3Q9UFD9 1639 aa11.22□□□□□ -0.61
LINC00343-201ENST00000414368 ARHGEF11O15085 1522 aa11.21□□□□□ -0.61
LINC00343-201ENST00000414368 KIF21BO75037 1637 aa11.2□□□□□ -0.62
LINC00343-201ENST00000414368 SHROOM2Q13796 1616 aa11.2□□□□□ -0.62
LINC00343-201ENST00000414368 ERCC6L2Q5T890 1561 aa11.2□□□□□ -0.62
LINC00343-201ENST00000414368 LHX6Q9UPM6 363 aa11.2□□□□□ -0.62
LINC00343-201ENST00000414368 CTTNBP2Q8WZ74 1663 aa11.2□□□□□ -0.62
LINC00343-201ENST00000414368 ARHGAP33O14559 1287 aa11.19□□□□□ -0.62
LINC00343-201ENST00000414368 IQGAP2Q13576 1575 aa11.19□□□□□ -0.62
LINC00343-201ENST00000414368 IFFO2Q5TF58 517 aa11.18□□□□□ -0.62
LINC00343-201ENST00000414368 PRG4Q92954 1404 aaPredicted RBP11.18□□□□□ -0.62
LINC00343-201ENST00000414368 UBTFP17480 764 aaKnown RBP11.17□□□□□ -0.62
LINC00343-201ENST00000414368 TK2O00142 265 aa11.16□□□□□ -0.62
LINC00343-201ENST00000414368 RANGAP1P46060 587 aaPredicted RBP11.16□□□□□ -0.62
LINC00343-201ENST00000414368 CYB5RLQ6IPT4 315 aa11.16□□□□□ -0.62
LINC00343-201ENST00000414368 Q6ZNB5 142 aa11.16□□□□□ -0.62
LINC00343-201ENST00000414368 KDM2AQ9Y2K7 1162 aa11.16□□□□□ -0.62
LINC00343-201ENST00000414368 GOLGA3Q08378 1498 aa11.15□□□□□ -0.62
LINC00343-201ENST00000414368 HRO43593 1189 aa11.15□□□□□ -0.62
LINC00343-201ENST00000414368 STAC3Q96MF2 364 aa11.15□□□□□ -0.62
LINC00343-201ENST00000414368 ARAP1Q96P48 1450 aa11.13□□□□□ -0.63
LINC00343-201ENST00000414368 TTBK1Q5TCY1 1321 aaPredicted RBP11.13□□□□□ -0.63
LINC00343-201ENST00000414368 A0A0G2JS52 829 aa11.13□□□□□ -0.63
LINC00343-201ENST00000414368 LOC105371045A0A1W2PR82 267 aa11.13□□□□□ -0.63
LINC00343-201ENST00000414368 UGGT2Q9NYU1 1516 aa11.12□□□□□ -0.63
LINC00343-201ENST00000414368 DISP1Q96F81 1524 aa11.11□□□□□ -0.63
LINC00343-201ENST00000414368 SOX12O15370 315 aa11.11□□□□□ -0.63
LINC00343-201ENST00000414368 NLRP6P59044 892 aa11.11□□□□□ -0.63
LINC00343-201ENST00000414368 P3H3Q8IVL6 736 aa11.11□□□□□ -0.63
LINC00343-201ENST00000414368 MFRPQ9BY79 579 aa11.11□□□□□ -0.63
LINC00343-201ENST00000414368 PTPN5P54829 565 aa11.1□□□□□ -0.63
LINC00343-201ENST00000414368 MS4A4AQ96JQ5 239 aa11.1□□□□□ -0.63
LINC00343-201ENST00000414368 CARMIL2Q6F5E8 1435 aa11.09□□□□□ -0.63
LINC00343-201ENST00000414368 KIAA0556O60303 1618 aa11.07□□□□□ -0.64
LINC00343-201ENST00000414368 DMRTA1Q5VZB9 504 aa11.07□□□□□ -0.64
LINC00343-201ENST00000414368 PCDHGA4Q9Y5G9 962 aa11.07□□□□□ -0.64
LINC00343-201ENST00000414368 BCANQ96GW7 911 aa11.06□□□□□ -0.64
LINC00343-201ENST00000414368 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
LINC00343-201ENST00000414368 PTPRGP23470 1445 aa11.06□□□□□ -0.64
LINC00343-201ENST00000414368 TNIKQ9UKE5 1360 aa11.05□□□□□ -0.64
LINC00343-201ENST00000414368 SAMD9Q5K651 1589 aa11.04□□□□□ -0.64
LINC00343-201ENST00000414368 PSDA5PKW4 1024 aaPredicted RBP11.04□□□□□ -0.64
LINC00343-201ENST00000414368 PSEN2P49810 448 aa11.03□□□□□ -0.64
LINC00343-201ENST00000414368 FBXO22Q8NEZ5 403 aa11.02□□□□□ -0.65
LINC00343-201ENST00000414368 FHOD3Q2V2M9 1422 aa11.01□□□□□ -0.65
LINC00343-201ENST00000414368 ARHGAP35Q9NRY4 1499 aa11□□□□□ -0.65
LINC00343-201ENST00000414368 SLC34A2O95436 690 aa11□□□□□ -0.65
LINC00343-201ENST00000414368 EFCAB5A4FU69 1503 aa10.99□□□□□ -0.65
LINC00343-201ENST00000414368 ADCY10Q96PN6 1610 aa10.99□□□□□ -0.65
LINC00343-201ENST00000414368 PLB1Q6P1J6 1458 aa10.99□□□□□ -0.65
LINC00343-201ENST00000414368 CLIP1P30622 1438 aa10.98□□□□□ -0.65
LINC00343-201ENST00000414368 UACAQ9BZF9 1416 aa10.98□□□□□ -0.65
LINC00343-201ENST00000414368 C2orf72A6NCS6 295 aa10.97□□□□□ -0.65
LINC00343-201ENST00000414368 PPP1R37O75864 691 aa10.97□□□□□ -0.65
LINC00343-201ENST00000414368 CEP162Q5TB80 1403 aa10.96□□□□□ -0.65
LINC00343-201ENST00000414368 ARID3CA6NKF2 412 aa10.96□□□□□ -0.65
LINC00343-201ENST00000414368 KIF3CO14782 793 aa10.96□□□□□ -0.65
LINC00343-201ENST00000414368 WDR70Q9NW82 654 aa10.96□□□□□ -0.65
LINC00343-201ENST00000414368 ABCA8O94911 1581 aa10.95□□□□□ -0.66
LINC00343-201ENST00000414368 ABCC2Q92887 1545 aa10.94□□□□□ -0.66
LINC00343-201ENST00000414368 UHRF1BP1LA0JNW5 1464 aa10.93□□□□□ -0.66
LINC00343-201ENST00000414368 CADPS2Q86UW7 1296 aa10.93□□□□□ -0.66
LINC00343-201ENST00000414368 RAPGEF6Q8TEU7 1601 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms