RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 SIN3AQ96ST3 1273 aa13.19□□□□□ -0.3
SCN5A-204ENST00000414099 RTN4Q9NQC3 1192 aaKnown RBP13.19□□□□□ -0.3
SCN5A-204ENST00000414099 AEBP2Q6ZN18 517 aaPredicted RBP13.19□□□□□ -0.3
SCN5A-204ENST00000414099 NOL10Q9BSC4 688 aaKnown RBP13.19□□□□□ -0.3
SCN5A-204ENST00000414099 C1orf141Q5JVX7 400 aa13.19□□□□□ -0.3
SCN5A-204ENST00000414099 RASSF8Q8NHQ8 419 aa13.19□□□□□ -0.3
SCN5A-204ENST00000414099 MYO15BQ96JP2 1530 aa13.18□□□□□ -0.3
SCN5A-204ENST00000414099 GOLGA6L3A6NEY3 463 aa13.18□□□□□ -0.3
SCN5A-204ENST00000414099 DCAF8L1A6NGE4 600 aa13.18□□□□□ -0.3
SCN5A-204ENST00000414099 TPM1P09493 284 aa13.17□□□□□ -0.3
SCN5A-204ENST00000414099 SMARCA4P51532 1647 aa13.17□□□□□ -0.3
SCN5A-204ENST00000414099 DEKP35659 375 aaKnown RBP13.17□□□□□ -0.3
SCN5A-204ENST00000414099 MPHOSPH9Q99550 1183 aa13.17□□□□□ -0.3
SCN5A-204ENST00000414099 WASHC2AQ641Q2 1341 aa13.17□□□□□ -0.3
SCN5A-204ENST00000414099 TRIM34Q9BYJ4 488 aa13.16□□□□□ -0.3
SCN5A-204ENST00000414099 KAT6BQ8WYB5 2073 aa13.16□□□□□ -0.3
SCN5A-204ENST00000414099 TRIM6-TRIM34B2RNG4 842 aa13.16□□□□□ -0.3
SCN5A-204ENST00000414099 MEX3CQ5U5Q3 659 aaKnown RBP13.15□□□□□ -0.3
SCN5A-204ENST00000414099 KIF16BQ96L93 1317 aa13.15□□□□□ -0.3
SCN5A-204ENST00000414099 ST18O60284 1047 aa13.15□□□□□ -0.3
SCN5A-204ENST00000414099 SMC4Q9NTJ3 1288 aa13.15□□□□□ -0.3
SCN5A-204ENST00000414099 CCDC144AA2RUR9 1427 aa13.15□□□□□ -0.3
SCN5A-204ENST00000414099 DDX11L8A8MPP1 907 aa13.15□□□□□ -0.3
SCN5A-204ENST00000414099 MARCH6O60337 910 aa13.15□□□□□ -0.3
SCN5A-204ENST00000414099 VGFO15240 615 aaPredicted RBP13.15□□□□□ -0.31
SCN5A-204ENST00000414099 TCEAL9Q9UHQ7 104 aa13.14□□□□□ -0.31
SCN5A-204ENST00000414099 ATP6V1DQ9Y5K8 247 aa13.14□□□□□ -0.31
SCN5A-204ENST00000414099 RCAN3Q9UKA8 241 aa13.13□□□□□ -0.31
SCN5A-204ENST00000414099 EVC2Q86UK5 1308 aa13.13□□□□□ -0.31
SCN5A-204ENST00000414099 CADPSQ9ULU8 1353 aa13.13□□□□□ -0.31
SCN5A-204ENST00000414099 B4GALNT3Q6L9W6 998 aa13.13□□□□□ -0.31
SCN5A-204ENST00000414099 TPD52L1Q16890 204 aaPredicted RBP13.12□□□□□ -0.31
SCN5A-204ENST00000414099 CTDP1Q9Y5B0 961 aaPredicted RBP13.12□□□□□ -0.31
SCN5A-204ENST00000414099 MROH2BQ7Z745 1585 aa13.12□□□□□ -0.31
SCN5A-204ENST00000414099 APBB1O00213 710 aa13.12□□□□□ -0.31
SCN5A-204ENST00000414099 HSPA5P11021 654 aaKnown RBP13.12□□□□□ -0.31
SCN5A-204ENST00000414099 AKAP17AQ02040 695 aaKnown RBP13.12□□□□□ -0.31
SCN5A-204ENST00000414099 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
SCN5A-204ENST00000414099 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.12□□□□□ -0.31
SCN5A-204ENST00000414099 CGNL1Q0VF96 1302 aa13.11□□□□□ -0.31
SCN5A-204ENST00000414099 VPS53Q5VIR6 699 aa13.11□□□□□ -0.31
SCN5A-204ENST00000414099 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
SCN5A-204ENST00000414099 COG3Q96JB2 828 aa13.11□□□□□ -0.31
SCN5A-204ENST00000414099 WWC1Q8IX03 1113 aa13.11□□□□□ -0.31
SCN5A-204ENST00000414099 SPRYD3Q8NCJ5 442 aa13.11□□□□□ -0.31
SCN5A-204ENST00000414099 PDE3BQ13370 1112 aa13.11□□□□□ -0.31
SCN5A-204ENST00000414099 CALRP27797 417 aaKnown RBP13.11□□□□□ -0.31
SCN5A-204ENST00000414099 SKOR2Q2VWA4 1001 aaPredicted RBP13.1□□□□□ -0.31
SCN5A-204ENST00000414099 TTC5Q8N0Z6 440 aa13.1□□□□□ -0.31
SCN5A-204ENST00000414099 KIF15Q9NS87 1388 aa13.1□□□□□ -0.31
SCN5A-204ENST00000414099 CUX1P39880 1505 aa13.1□□□□□ -0.31
SCN5A-204ENST00000414099 JPH4Q96JJ6 628 aa13.1□□□□□ -0.31
SCN5A-204ENST00000414099 SF3A1Q15459 793 aaKnown RBP13.09□□□□□ -0.31
SCN5A-204ENST00000414099 CCDC47Q96A33 483 aaKnown RBP13.09□□□□□ -0.31
SCN5A-204ENST00000414099 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
SCN5A-204ENST00000414099 ROCK1Q13464 1354 aa13.09□□□□□ -0.31
SCN5A-204ENST00000414099 SYNE3Q6ZMZ3 975 aa13.09□□□□□ -0.31
SCN5A-204ENST00000414099 HNRNPMP52272 730 aaKnown RBP eCLIP13.08□□□□□ -0.31
SCN5A-204ENST00000414099 KRI1Q8N9T8 703 aaKnown RBP13.08□□□□□ -0.31
SCN5A-204ENST00000414099 HOOK1Q9UJC3 728 aaKnown RBP13.08□□□□□ -0.31
SCN5A-204ENST00000414099 AMER1Q5JTC6 1135 aaPredicted RBP13.08□□□□□ -0.32
SCN5A-204ENST00000414099 SLC4A10Q6U841 1118 aa13.08□□□□□ -0.32
SCN5A-204ENST00000414099 GOLGA6L19H0YKK7 550 aa13.07□□□□□ -0.32
SCN5A-204ENST00000414099 NLRP13Q86W25 1043 aa13.07□□□□□ -0.32
SCN5A-204ENST00000414099 CENPJQ9HC77 1338 aaPredicted RBP13.07□□□□□ -0.32
SCN5A-204ENST00000414099 FOXD1Q16676 465 aa13.07□□□□□ -0.32
SCN5A-204ENST00000414099 CPLX2Q6PUV4 134 aaKnown RBP13.07□□□□□ -0.32
SCN5A-204ENST00000414099 TEFQ10587 303 aa13.07□□□□□ -0.32
SCN5A-204ENST00000414099 ANKRD20A12PQ8NF67 263 aa13.07□□□□□ -0.32
SCN5A-204ENST00000414099 SENP3-EIF4A1A0A087X0R7 540 aa13.07□□□□□ -0.32
SCN5A-204ENST00000414099 CDR1P51861 262 aa13.07□□□□□ -0.32
SCN5A-204ENST00000414099 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
SCN5A-204ENST00000414099 H3BQV1 296 aa13.06□□□□□ -0.32
SCN5A-204ENST00000414099 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
SCN5A-204ENST00000414099 IFFO2Q5TF58 517 aa13.06□□□□□ -0.32
SCN5A-204ENST00000414099 TOMM22Q9NS69 142 aa13.06□□□□□ -0.32
SCN5A-204ENST00000414099 FANCD2Q9BXW9 1451 aa13.06□□□□□ -0.32
SCN5A-204ENST00000414099 HMGB2P26583 209 aaKnown RBP13.06□□□□□ -0.32
SCN5A-204ENST00000414099 TEX35Q5T0J7 233 aa13.05□□□□□ -0.32
SCN5A-204ENST00000414099 PTPRGP23470 1445 aa13.05□□□□□ -0.32
SCN5A-204ENST00000414099 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.05□□□□□ -0.32
SCN5A-204ENST00000414099 MSH5O43196 834 aa13.05□□□□□ -0.32
SCN5A-204ENST00000414099 NGEFQ8N5V2 710 aa13.05□□□□□ -0.32
SCN5A-204ENST00000414099 PSME1Q06323 249 aa13.05□□□□□ -0.32
SCN5A-204ENST00000414099 STAC3Q96MF2 364 aa13.05□□□□□ -0.32
SCN5A-204ENST00000414099 MIA2Q96PC5 1412 aa13.05□□□□□ -0.32
SCN5A-204ENST00000414099 VPS37DQ86XT2 251 aa13.04□□□□□ -0.32
SCN5A-204ENST00000414099 RUFY2Q8WXA3 655 aa13.04□□□□□ -0.32
SCN5A-204ENST00000414099 LTV1Q96GA3 475 aaPredicted RBP13.04□□□□□ -0.32
SCN5A-204ENST00000414099 IPO7O95373 1038 aaKnown RBP13.04□□□□□ -0.32
SCN5A-204ENST00000414099 RSPH6AQ9H0K4 717 aa13.04□□□□□ -0.32
SCN5A-204ENST00000414099 ATF3P18847 181 aa13.03□□□□□ -0.32
SCN5A-204ENST00000414099 RRP12Q5JTH9 1297 aaKnown RBP13.03□□□□□ -0.32
SCN5A-204ENST00000414099 CREBRFQ8IUR6 639 aa13.03□□□□□ -0.32
SCN5A-204ENST00000414099 CWC22Q9HCG8 908 aaKnown RBP13.03□□□□□ -0.32
SCN5A-204ENST00000414099 FAM184AQ8NB25 1140 aa13.02□□□□□ -0.32
SCN5A-204ENST00000414099 MFAP1P55081 439 aaKnown RBP13.02□□□□□ -0.32
SCN5A-204ENST00000414099 GZF1Q9H116 711 aaPredicted RBP13.02□□□□□ -0.33
SCN5A-204ENST00000414099 ACBD3Q9H3P7 528 aa13.02□□□□□ -0.33
SCN5A-204ENST00000414099 TRIM29Q14134 588 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms