RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 ARID4BQ4LE39 1312 aaPredicted RBP19.22■□□□□ 0.67
ATRIP-204ENST00000412052 RNF123Q5XPI4 1314 aa19.22■□□□□ 0.67
ATRIP-204ENST00000412052 BCL11AQ9H165 835 aa19.21■□□□□ 0.67
ATRIP-204ENST00000412052 KDM5DQ9BY66 1539 aa19.21■□□□□ 0.67
ATRIP-204ENST00000412052 PTPRGP23470 1445 aa19.21■□□□□ 0.67
ATRIP-204ENST00000412052 SAMD9LQ8IVG5 1584 aa19.2■□□□□ 0.66
ATRIP-204ENST00000412052 FAM135AQ9P2D6 1515 aa19.2■□□□□ 0.66
ATRIP-204ENST00000412052 MYBBP1AQ9BQG0 1328 aaKnown RBP19.19■□□□□ 0.66
ATRIP-204ENST00000412052 LRPPRCP42704 1394 aaKnown RBP19.18■□□□□ 0.66
ATRIP-204ENST00000412052 PAK3O75914 559 aaPredicted RBP19.17■□□□□ 0.66
ATRIP-204ENST00000412052 CDC42BPBQ9Y5S2 1711 aa19.17■□□□□ 0.66
ATRIP-204ENST00000412052 CCDC141Q6ZP82 1450 aa19.15■□□□□ 0.66
ATRIP-204ENST00000412052 PRAG1Q86YV5 1406 aa19.15■□□□□ 0.66
ATRIP-204ENST00000412052 PLA2R1Q13018 1463 aa19.15■□□□□ 0.66
ATRIP-204ENST00000412052 SYCP2Q9BX26 1530 aa19.14■□□□□ 0.66
ATRIP-204ENST00000412052 CCDC144AA2RUR9 1427 aa19.14■□□□□ 0.66
ATRIP-204ENST00000412052 E9PCH4 1651 aa19.14■□□□□ 0.66
ATRIP-204ENST00000412052 BRD4O60885 1362 aaPredicted RBP19.14■□□□□ 0.65
ATRIP-204ENST00000412052 CC2D1BQ5T0F9 858 aaKnown RBP19.14■□□□□ 0.65
ATRIP-204ENST00000412052 ARHGEF5Q12774 1597 aa19.14■□□□□ 0.65
ATRIP-204ENST00000412052 RALBP1Q15311 655 aa19.12■□□□□ 0.65
ATRIP-204ENST00000412052 CDCA7LQ96GN5 454 aa19.12■□□□□ 0.65
ATRIP-204ENST00000412052 EXOC6Q8TAG9 804 aa19.12■□□□□ 0.65
ATRIP-204ENST00000412052 DISP3Q9P2K9 1392 aa19.12■□□□□ 0.65
ATRIP-204ENST00000412052 TRPM1Q7Z4N2 1603 aa19.11■□□□□ 0.65
ATRIP-204ENST00000412052 A2MP01023 1474 aa19.11■□□□□ 0.65
ATRIP-204ENST00000412052 TTC37Q6PGP7 1564 aa19.1■□□□□ 0.65
ATRIP-204ENST00000412052 PREX2Q70Z35 1606 aa19.1■□□□□ 0.65
ATRIP-204ENST00000412052 PER1O15534 1290 aaPredicted RBP19.09■□□□□ 0.65
ATRIP-204ENST00000412052 RRP1P56182 461 aaKnown RBP19.09■□□□□ 0.65
ATRIP-204ENST00000412052 KTN1Q86UP2 1357 aaKnown RBP19.09■□□□□ 0.65
ATRIP-204ENST00000412052 PLEKHH2Q8IVE3 1493 aa19.08■□□□□ 0.65
ATRIP-204ENST00000412052 PARD3Q8TEW0 1356 aa19.08■□□□□ 0.65
ATRIP-204ENST00000412052 ARHGAP5Q13017 1502 aa19.08■□□□□ 0.64
ATRIP-204ENST00000412052 NBR1Q14596 966 aa19.08■□□□□ 0.64
ATRIP-204ENST00000412052 NLRP13Q86W25 1043 aa19.08■□□□□ 0.64
ATRIP-204ENST00000412052 NOP58Q9Y2X3 529 aaKnown RBP19.08■□□□□ 0.64
ATRIP-204ENST00000412052 TESK2Q96S53 571 aa19.07■□□□□ 0.64
ATRIP-204ENST00000412052 RCAN3Q9UKA8 241 aa19.06■□□□□ 0.64
ATRIP-204ENST00000412052 PLIN1O60240 522 aa19.05■□□□□ 0.64
ATRIP-204ENST00000412052 PANK3Q9H999 370 aa19.05■□□□□ 0.64
ATRIP-204ENST00000412052 SKAP1Q86WV1 359 aa19.04■□□□□ 0.64
ATRIP-204ENST00000412052 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.04■□□□□ 0.64
ATRIP-204ENST00000412052 ERCC6L2Q5T890 1561 aa19.03■□□□□ 0.64
ATRIP-204ENST00000412052 COL17A1Q9UMD9 1497 aaPredicted RBP19.02■□□□□ 0.64
ATRIP-204ENST00000412052 MYO5CQ9NQX4 1742 aa19.01■□□□□ 0.63
ATRIP-204ENST00000412052 UNC13BO14795 1591 aa19■□□□□ 0.63
ATRIP-204ENST00000412052 GPRASP1Q5JY77 1395 aa19■□□□□ 0.63
ATRIP-204ENST00000412052 NPM2Q86SE8 214 aaKnown RBP18.99■□□□□ 0.63
ATRIP-204ENST00000412052 ERBINQ96RT1 1412 aa18.99■□□□□ 0.63
ATRIP-204ENST00000412052 PRDM15P57071 1507 aaPredicted RBP18.98■□□□□ 0.63
ATRIP-204ENST00000412052 RSPH4AQ5TD94 716 aa18.97■□□□□ 0.63
ATRIP-204ENST00000412052 CHD1O14646 1710 aa18.97■□□□□ 0.63
ATRIP-204ENST00000412052 ANP32AP39687 249 aaKnown RBP18.96■□□□□ 0.63
ATRIP-204ENST00000412052 IPO9Q96P70 1041 aaKnown RBP18.95■□□□□ 0.62
ATRIP-204ENST00000412052 IQGAP3Q86VI3 1631 aa18.94■□□□□ 0.62
ATRIP-204ENST00000412052 DEKP35659 375 aaKnown RBP18.94■□□□□ 0.62
ATRIP-204ENST00000412052 MAST1Q9Y2H9 1570 aa18.93■□□□□ 0.62
ATRIP-204ENST00000412052 TMF1P82094 1093 aa18.93■□□□□ 0.62
ATRIP-204ENST00000412052 C20orf194Q5TEA3 1177 aa18.92■□□□□ 0.62
ATRIP-204ENST00000412052 ADAMTS8Q9UP79 889 aa18.92■□□□□ 0.62
ATRIP-204ENST00000412052 CRBNQ96SW2 442 aa18.91■□□□□ 0.62
ATRIP-204ENST00000412052 TRAPPC8Q9Y2L5 1435 aa18.91■□□□□ 0.62
ATRIP-204ENST00000412052 MAGI2Q86UL8 1455 aa18.9■□□□□ 0.62
ATRIP-204ENST00000412052 BLMP54132 1417 aaPredicted RBP18.9■□□□□ 0.62
ATRIP-204ENST00000412052 PLXNC1O60486 1568 aa18.9■□□□□ 0.62
ATRIP-204ENST00000412052 PDE3BQ13370 1112 aa18.89■□□□□ 0.62
ATRIP-204ENST00000412052 ZBTB47Q9UFB7 747 aaPredicted RBP18.88■□□□□ 0.61
ATRIP-204ENST00000412052 AFAP1Q8N556 730 aa18.88■□□□□ 0.61
ATRIP-204ENST00000412052 DUOX2Q9NRD8 1548 aa18.88■□□□□ 0.61
ATRIP-204ENST00000412052 PDE4AP27815 886 aa18.87■□□□□ 0.61
ATRIP-204ENST00000412052 LAMC1P11047 1609 aa18.87■□□□□ 0.61
ATRIP-204ENST00000412052 ABCC2Q92887 1545 aa18.87■□□□□ 0.61
ATRIP-204ENST00000412052 WDR7Q9Y4E6 1490 aa18.86■□□□□ 0.61
ATRIP-204ENST00000412052 PLEKHH1Q9ULM0 1364 aa18.86■□□□□ 0.61
ATRIP-204ENST00000412052 EIF2AK4Q9P2K8 1649 aaKnown RBP18.86■□□□□ 0.61
ATRIP-204ENST00000412052 PPP2R1AP30153 589 aa18.84■□□□□ 0.61
ATRIP-204ENST00000412052 RNF17Q9BXT8 1623 aaKnown RBP18.84■□□□□ 0.61
ATRIP-204ENST00000412052 WASHC2CQ9Y4E1 1318 aa18.83■□□□□ 0.61
ATRIP-204ENST00000412052 SHROOM2Q13796 1616 aa18.83■□□□□ 0.6
ATRIP-204ENST00000412052 TCERG1O14776 1098 aaKnown RBP18.83■□□□□ 0.6
ATRIP-204ENST00000412052 KNSTRNQ9Y448 316 aa18.83■□□□□ 0.6
ATRIP-204ENST00000412052 ATP10AO60312 1499 aa18.83■□□□□ 0.6
ATRIP-204ENST00000412052 PLCH2O75038 1416 aa18.82■□□□□ 0.6
ATRIP-204ENST00000412052 AMER1Q5JTC6 1135 aaPredicted RBP18.82■□□□□ 0.6
ATRIP-204ENST00000412052 EFCAB2Q5VUJ9 269 aa18.82■□□□□ 0.6
ATRIP-204ENST00000412052 BACH2Q9BYV9 841 aa18.81■□□□□ 0.6
ATRIP-204ENST00000412052 ZMYM4Q5VZL5 1548 aa18.81■□□□□ 0.6
ATRIP-204ENST00000412052 MADDQ8WXG6 1647 aa18.81■□□□□ 0.6
ATRIP-204ENST00000412052 CCDC146Q8IYE0 955 aa18.81■□□□□ 0.6
ATRIP-204ENST00000412052 LAS1LQ9Y4W2 734 aaKnown RBP18.81■□□□□ 0.6
ATRIP-204ENST00000412052 ABCC1P33527 1531 aa18.79■□□□□ 0.6
ATRIP-204ENST00000412052 ZCCHC11Q5TAX3 1644 aaKnown RBP18.79■□□□□ 0.6
ATRIP-204ENST00000412052 SPAG9O60271 1321 aaKnown RBP18.79■□□□□ 0.6
ATRIP-204ENST00000412052 WDR43Q15061 677 aaKnown RBP eCLIP18.78■□□□□ 0.6
ATRIP-204ENST00000412052 DUSP27Q5VZP5 1158 aa18.77■□□□□ 0.6
ATRIP-204ENST00000412052 IQGAP1P46940 1657 aa18.77■□□□□ 0.59
ATRIP-204ENST00000412052 CLTCL1P53675 1640 aa18.76■□□□□ 0.59
ATRIP-204ENST00000412052 SPINK5Q9NQ38 1064 aaPredicted RBP18.75■□□□□ 0.59
ATRIP-204ENST00000412052 MYT1LQ9UL68 1186 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms