RNA–Protein interactions for RNA: ENST00000411850.5

TOM1-204, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TOM1, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-204ENST00000411850 CARD11Q9BXL7 1154 aa23.01■■□□□ 1.27
TOM1-204ENST00000411850 SYCP2Q9BX26 1530 aa23.01■■□□□ 1.27
TOM1-204ENST00000411850 PLCH2O75038 1416 aa23■■□□□ 1.27
TOM1-204ENST00000411850 SMG6Q86US8 1419 aaKnown RBP23■■□□□ 1.27
TOM1-204ENST00000411850 PLEKHH2Q8IVE3 1493 aa23■■□□□ 1.27
TOM1-204ENST00000411850 OSCARQ8IYS5 282 aa22.99■■□□□ 1.27
TOM1-204ENST00000411850 MAST1Q9Y2H9 1570 aa22.99■■□□□ 1.27
TOM1-204ENST00000411850 FAM135AQ9P2D6 1515 aa22.99■■□□□ 1.27
TOM1-204ENST00000411850 POLR3GLQ9BT43 218 aa22.97■■□□□ 1.27
TOM1-204ENST00000411850 DCAF11Q8TEB1 546 aa22.94■■□□□ 1.26
TOM1-204ENST00000411850 KTN1Q86UP2 1357 aaKnown RBP22.94■■□□□ 1.26
TOM1-204ENST00000411850 WDR7Q9Y4E6 1490 aa22.92■■□□□ 1.26
TOM1-204ENST00000411850 ST20-MTHFSA0A0A6YYL1 179 aa22.92■■□□□ 1.26
TOM1-204ENST00000411850 PNISRQ8TF01 805 aaKnown RBP22.92■■□□□ 1.26
TOM1-204ENST00000411850 KDM2AQ9Y2K7 1162 aa22.92■■□□□ 1.26
TOM1-204ENST00000411850 ARAP3Q8WWN8 1544 aa22.92■■□□□ 1.26
TOM1-204ENST00000411850 FANCIQ9NVI1 1328 aa22.92■■□□□ 1.26
TOM1-204ENST00000411850 UNC13BO14795 1591 aa22.92■■□□□ 1.26
TOM1-204ENST00000411850 E9PCH4 1651 aa22.91■■□□□ 1.26
TOM1-204ENST00000411850 EFCAB2Q5VUJ9 269 aa22.9■■□□□ 1.26
TOM1-204ENST00000411850 NUDCQ9Y266 331 aa22.9■■□□□ 1.26
TOM1-204ENST00000411850 PLXNC1O60486 1568 aa22.89■■□□□ 1.26
TOM1-204ENST00000411850 RNF123Q5XPI4 1314 aa22.89■■□□□ 1.25
TOM1-204ENST00000411850 TRPM1Q7Z4N2 1603 aa22.89■■□□□ 1.25
TOM1-204ENST00000411850 ABCC1P33527 1531 aa22.89■■□□□ 1.25
TOM1-204ENST00000411850 PRAG1Q86YV5 1406 aa22.88■■□□□ 1.25
TOM1-204ENST00000411850 CCDC144AA2RUR9 1427 aa22.88■■□□□ 1.25
TOM1-204ENST00000411850 TMC1Q8TDI8 760 aa22.87■■□□□ 1.25
TOM1-204ENST00000411850 RALBP1Q15311 655 aa22.86■■□□□ 1.25
TOM1-204ENST00000411850 BRD4O60885 1362 aaPredicted RBP22.86■■□□□ 1.25
TOM1-204ENST00000411850 LRPPRCP42704 1394 aaKnown RBP22.86■■□□□ 1.25
TOM1-204ENST00000411850 CNGB1Q14028 1251 aaPredicted RBP22.85■■□□□ 1.25
TOM1-204ENST00000411850 MYBBP1AQ9BQG0 1328 aaKnown RBP22.84■■□□□ 1.25
TOM1-204ENST00000411850 B4GALNT3Q6L9W6 998 aa22.84■■□□□ 1.25
TOM1-204ENST00000411850 ABCA9Q8IUA7 1624 aa22.84■■□□□ 1.25
TOM1-204ENST00000411850 PLA2R1Q13018 1463 aa22.84■■□□□ 1.25
TOM1-204ENST00000411850 GPRASP1Q5JY77 1395 aa22.83■■□□□ 1.25
TOM1-204ENST00000411850 IQGAP3Q86VI3 1631 aa22.83■■□□□ 1.25
TOM1-204ENST00000411850 LAMC1P11047 1609 aa22.83■■□□□ 1.24
TOM1-204ENST00000411850 ASXL2Q76L83 1435 aa22.82■■□□□ 1.24
TOM1-204ENST00000411850 MSH5O43196 834 aa22.81■■□□□ 1.24
TOM1-204ENST00000411850 A2MP01023 1474 aa22.79■■□□□ 1.24
TOM1-204ENST00000411850 DUOX2Q9NRD8 1548 aa22.79■■□□□ 1.24
TOM1-204ENST00000411850 TRAPPC8Q9Y2L5 1435 aa22.79■■□□□ 1.24
TOM1-204ENST00000411850 ATP10AO60312 1499 aa22.78■■□□□ 1.24
TOM1-204ENST00000411850 MAGI2Q86UL8 1455 aa22.78■■□□□ 1.24
TOM1-204ENST00000411850 PRDM15P57071 1507 aaPredicted RBP22.76■■□□□ 1.23
TOM1-204ENST00000411850 PARD3Q8TEW0 1356 aa22.75■■□□□ 1.23
TOM1-204ENST00000411850 EIF2AK4Q9P2K8 1649 aaKnown RBP22.75■■□□□ 1.23
TOM1-204ENST00000411850 ERBINQ96RT1 1412 aa22.75■■□□□ 1.23
TOM1-204ENST00000411850 FANCAO15360 1455 aa22.74■■□□□ 1.23
TOM1-204ENST00000411850 RTEL1-TNFRSF6BF6WH68 1400 aa22.74■■□□□ 1.23
TOM1-204ENST00000411850 COL17A1Q9UMD9 1497 aaPredicted RBP22.73■■□□□ 1.23
TOM1-204ENST00000411850 NBPF1Q3BBV0 1214 aa22.73■■□□□ 1.23
TOM1-204ENST00000411850 RGL3Q3MIN7 710 aa22.72■■□□□ 1.23
TOM1-204ENST00000411850 NLRP13Q86W25 1043 aa22.72■■□□□ 1.23
TOM1-204ENST00000411850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.72■■□□□ 1.23
TOM1-204ENST00000411850 WASHC2CQ9Y4E1 1318 aa22.71■■□□□ 1.23
TOM1-204ENST00000411850 PER1O15534 1290 aaPredicted RBP22.71■■□□□ 1.23
TOM1-204ENST00000411850 NPM1P06748 294 aaKnown RBP eCLIP22.71■■□□□ 1.23
TOM1-204ENST00000411850 ZFYVE16Q7Z3T8 1539 aa22.7■■□□□ 1.22
TOM1-204ENST00000411850 SPAG9O60271 1321 aaKnown RBP22.69■■□□□ 1.22
TOM1-204ENST00000411850 TESK2Q96S53 571 aa22.68■■□□□ 1.22
TOM1-204ENST00000411850 AFAP1Q8N556 730 aa22.68■■□□□ 1.22
TOM1-204ENST00000411850 INO80Q9ULG1 1556 aaPredicted RBP22.65■■□□□ 1.22
TOM1-204ENST00000411850 ADGRL1O94910 1474 aa22.65■■□□□ 1.22
TOM1-204ENST00000411850 DISP3Q9P2K9 1392 aa22.65■■□□□ 1.22
TOM1-204ENST00000411850 CCDC136Q96JN2 1154 aa22.65■■□□□ 1.22
TOM1-204ENST00000411850 INSRP06213 1382 aa22.64■■□□□ 1.22
TOM1-204ENST00000411850 RNF17Q9BXT8 1623 aaKnown RBP22.64■■□□□ 1.22
TOM1-204ENST00000411850 ZMYM4Q5VZL5 1548 aa22.63■■□□□ 1.21
TOM1-204ENST00000411850 PDE3BQ13370 1112 aa22.63■■□□□ 1.21
TOM1-204ENST00000411850 SCAPERQ9BY12 1400 aa22.62■■□□□ 1.21
TOM1-204ENST00000411850 ATP7AQ04656 1500 aa22.62■■□□□ 1.21
TOM1-204ENST00000411850 SENP3-EIF4A1A0A087X0R7 540 aa22.61■■□□□ 1.21
TOM1-204ENST00000411850 TMF1P82094 1093 aa22.6■■□□□ 1.21
TOM1-204ENST00000411850 ERICH6Q7L0X2 663 aa22.58■■□□□ 1.21
TOM1-204ENST00000411850 RRP1P56182 461 aaKnown RBP22.57■■□□□ 1.2
TOM1-204ENST00000411850 CFAP74Q9C0B2 1584 aa22.57■■□□□ 1.2
TOM1-204ENST00000411850 CD109Q6YHK3 1445 aa22.57■■□□□ 1.2
TOM1-204ENST00000411850 DEPDC5O75140 1603 aa22.56■■□□□ 1.2
TOM1-204ENST00000411850 PANK3Q9H999 370 aa22.56■■□□□ 1.2
TOM1-204ENST00000411850 BLMP54132 1417 aaPredicted RBP22.56■■□□□ 1.2
TOM1-204ENST00000411850 RCAN3Q9UKA8 241 aa22.55■■□□□ 1.2
TOM1-204ENST00000411850 MADDQ8WXG6 1647 aa22.54■■□□□ 1.2
TOM1-204ENST00000411850 TRPM2O94759 1503 aa22.54■■□□□ 1.2
TOM1-204ENST00000411850 CC2D1BQ5T0F9 858 aaKnown RBP22.52■■□□□ 1.2
TOM1-204ENST00000411850 STAC3Q96MF2 364 aa22.52■■□□□ 1.2
TOM1-204ENST00000411850 ZNF518AQ6AHZ1 1483 aa22.52■■□□□ 1.2
TOM1-204ENST00000411850 IQGAP1P46940 1657 aa22.52■■□□□ 1.2
TOM1-204ENST00000411850 PTPRTO14522 1441 aa22.51■■□□□ 1.19
TOM1-204ENST00000411850 KIDINS220Q9ULH0 1771 aa22.51■■□□□ 1.19
TOM1-204ENST00000411850 SPHKAPQ2M3C7 1700 aa22.5■■□□□ 1.19
TOM1-204ENST00000411850 CEP152O94986 1710 aa22.49■■□□□ 1.19
TOM1-204ENST00000411850 VWDEQ8N2E2 1590 aa22.49■■□□□ 1.19
TOM1-204ENST00000411850 POGZQ7Z3K3 1410 aa22.47■■□□□ 1.19
TOM1-204ENST00000411850 SALL2Q9Y467 1007 aaPredicted RBP22.46■■□□□ 1.19
TOM1-204ENST00000411850 TET3O43151 1660 aa22.45■■□□□ 1.18
TOM1-204ENST00000411850 EXOC6Q8TAG9 804 aa22.45■■□□□ 1.18
TOM1-204ENST00000411850 RIMBP3CA6NJZ7 1639 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms