RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 CCDC141Q6ZP82 1450 aa10.66□□□□□ -0.7
EPHA4-203ENST00000409938 PRAG1Q86YV5 1406 aa10.65□□□□□ -0.7
EPHA4-203ENST00000409938 MAGI2Q86UL8 1455 aa10.65□□□□□ -0.7
EPHA4-203ENST00000409938 PLA2R1Q13018 1463 aa10.65□□□□□ -0.71
EPHA4-203ENST00000409938 SHROOM2Q13796 1616 aa10.64□□□□□ -0.71
EPHA4-203ENST00000409938 RNF17Q9BXT8 1623 aaKnown RBP10.64□□□□□ -0.71
EPHA4-203ENST00000409938 INSRP06213 1382 aa10.64□□□□□ -0.71
EPHA4-203ENST00000409938 PARD3Q8TEW0 1356 aa10.64□□□□□ -0.71
EPHA4-203ENST00000409938 CHMP7Q8WUX9 453 aaPredicted RBP10.63□□□□□ -0.71
EPHA4-203ENST00000409938 ATP10AO60312 1499 aa10.63□□□□□ -0.71
EPHA4-203ENST00000409938 TTC37Q6PGP7 1564 aa10.62□□□□□ -0.71
EPHA4-203ENST00000409938 COL17A1Q9UMD9 1497 aaPredicted RBP10.62□□□□□ -0.71
EPHA4-203ENST00000409938 MYBBP1AQ9BQG0 1328 aaKnown RBP10.62□□□□□ -0.71
EPHA4-203ENST00000409938 EIF2AK4Q9P2K8 1649 aaKnown RBP10.62□□□□□ -0.71
EPHA4-203ENST00000409938 PLEKHD1A6NEE1 506 aa10.62□□□□□ -0.71
EPHA4-203ENST00000409938 A2MP01023 1474 aa10.61□□□□□ -0.71
EPHA4-203ENST00000409938 RALBP1Q15311 655 aa10.61□□□□□ -0.71
EPHA4-203ENST00000409938 ZNF777Q9ULD5 760 aaPredicted RBP10.61□□□□□ -0.71
EPHA4-203ENST00000409938 CARD11Q9BXL7 1154 aa10.61□□□□□ -0.71
EPHA4-203ENST00000409938 ERCC6Q03468 1493 aa10.6□□□□□ -0.71
EPHA4-203ENST00000409938 ST20-MTHFSA0A0A6YYL1 179 aa10.6□□□□□ -0.71
EPHA4-203ENST00000409938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.6□□□□□ -0.71
EPHA4-203ENST00000409938 SYCP2Q9BX26 1530 aa10.6□□□□□ -0.71
EPHA4-203ENST00000409938 BCL11AQ9H165 835 aa10.6□□□□□ -0.71
EPHA4-203ENST00000409938 PER1O15534 1290 aaPredicted RBP10.59□□□□□ -0.71
EPHA4-203ENST00000409938 BLMP54132 1417 aaPredicted RBP10.59□□□□□ -0.71
EPHA4-203ENST00000409938 RSPH4AQ5TD94 716 aa10.58□□□□□ -0.72
EPHA4-203ENST00000409938 IQGAP1P46940 1657 aa10.57□□□□□ -0.72
EPHA4-203ENST00000409938 TSPY4P0CV99 314 aa10.57□□□□□ -0.72
EPHA4-203ENST00000409938 TSPY10P0CW01 314 aa10.57□□□□□ -0.72
EPHA4-203ENST00000409938 HNRNPMP52272 730 aaKnown RBP eCLIP10.57□□□□□ -0.72
EPHA4-203ENST00000409938 ZNF326Q5BKZ1 582 aaKnown RBP10.57□□□□□ -0.72
EPHA4-203ENST00000409938 WASHC2CQ9Y4E1 1318 aa10.56□□□□□ -0.72
EPHA4-203ENST00000409938 CHD1O14646 1710 aa10.56□□□□□ -0.72
EPHA4-203ENST00000409938 CCDC144AA2RUR9 1427 aa10.56□□□□□ -0.72
EPHA4-203ENST00000409938 TMC1Q8TDI8 760 aa10.56□□□□□ -0.72
EPHA4-203ENST00000409938 DUOX2Q9NRD8 1548 aa10.56□□□□□ -0.72
EPHA4-203ENST00000409938 DCAF11Q8TEB1 546 aa10.56□□□□□ -0.72
EPHA4-203ENST00000409938 MYT1LQ9UL68 1186 aa10.56□□□□□ -0.72
EPHA4-203ENST00000409938 TESK2Q96S53 571 aa10.55□□□□□ -0.72
EPHA4-203ENST00000409938 MADDQ8WXG6 1647 aa10.55□□□□□ -0.72
EPHA4-203ENST00000409938 ERBINQ96RT1 1412 aa10.55□□□□□ -0.72
EPHA4-203ENST00000409938 PLEKHH2Q8IVE3 1493 aa10.54□□□□□ -0.72
EPHA4-203ENST00000409938 RRP1P56182 461 aaKnown RBP10.54□□□□□ -0.72
EPHA4-203ENST00000409938 PDE3BQ13370 1112 aa10.54□□□□□ -0.72
EPHA4-203ENST00000409938 NLRP13Q86W25 1043 aa10.54□□□□□ -0.72
EPHA4-203ENST00000409938 SPHKAPQ2M3C7 1700 aa10.54□□□□□ -0.72
EPHA4-203ENST00000409938 ABCC2Q92887 1545 aa10.53□□□□□ -0.72
EPHA4-203ENST00000409938 DISP3Q9P2K9 1392 aa10.53□□□□□ -0.72
EPHA4-203ENST00000409938 CEP152O94986 1710 aa10.53□□□□□ -0.72
EPHA4-203ENST00000409938 ARHGAP5Q13017 1502 aa10.53□□□□□ -0.72
EPHA4-203ENST00000409938 DEPDC5O75140 1603 aa10.53□□□□□ -0.72
EPHA4-203ENST00000409938 CCDC136Q96JN2 1154 aa10.52□□□□□ -0.72
EPHA4-203ENST00000409938 NOP58Q9Y2X3 529 aaKnown RBP10.52□□□□□ -0.73
EPHA4-203ENST00000409938 MYOM1P52179 1685 aa10.51□□□□□ -0.73
EPHA4-203ENST00000409938 ABCC1P33527 1531 aa10.51□□□□□ -0.73
EPHA4-203ENST00000409938 NEURL4Q96JN8 1562 aa10.51□□□□□ -0.73
EPHA4-203ENST00000409938 KDM2AQ9Y2K7 1162 aa10.51□□□□□ -0.73
EPHA4-203ENST00000409938 WDR7Q9Y4E6 1490 aa10.51□□□□□ -0.73
EPHA4-203ENST00000409938 PAK3O75914 559 aaPredicted RBP10.51□□□□□ -0.73
EPHA4-203ENST00000409938 NBPF1Q3BBV0 1214 aa10.51□□□□□ -0.73
EPHA4-203ENST00000409938 CLASP1Q7Z460 1538 aa10.51□□□□□ -0.73
EPHA4-203ENST00000409938 KIAA1210Q9ULL0 1709 aa10.5□□□□□ -0.73
EPHA4-203ENST00000409938 SYNMO15061 1565 aa10.5□□□□□ -0.73
EPHA4-203ENST00000409938 FBLN2P98095 1184 aa10.5□□□□□ -0.73
EPHA4-203ENST00000409938 POLR3GLQ9BT43 218 aa10.5□□□□□ -0.73
EPHA4-203ENST00000409938 TRPM2O94759 1503 aa10.5□□□□□ -0.73
EPHA4-203ENST00000409938 IPO9Q96P70 1041 aaKnown RBP10.49□□□□□ -0.73
EPHA4-203ENST00000409938 ERICH6Q7L0X2 663 aa10.49□□□□□ -0.73
EPHA4-203ENST00000409938 RCAN3Q9UKA8 241 aa10.49□□□□□ -0.73
EPHA4-203ENST00000409938 ZCCHC11Q5TAX3 1644 aaKnown RBP10.49□□□□□ -0.73
EPHA4-203ENST00000409938 ERCC6L2Q5T890 1561 aa10.49□□□□□ -0.73
EPHA4-203ENST00000409938 VWDEQ8N2E2 1590 aa10.48□□□□□ -0.73
EPHA4-203ENST00000409938 ARAP3Q8WWN8 1544 aa10.48□□□□□ -0.73
EPHA4-203ENST00000409938 PLCH2O75038 1416 aa10.48□□□□□ -0.73
EPHA4-203ENST00000409938 UHRF1BP1LA0JNW5 1464 aa10.47□□□□□ -0.73
EPHA4-203ENST00000409938 PTPRTO14522 1441 aa10.47□□□□□ -0.73
EPHA4-203ENST00000409938 SCAPERQ9BY12 1400 aa10.47□□□□□ -0.73
EPHA4-203ENST00000409938 EXOC6Q8TAG9 804 aa10.47□□□□□ -0.73
EPHA4-203ENST00000409938 CLTCL1P53675 1640 aa10.46□□□□□ -0.73
EPHA4-203ENST00000409938 TCERG1O14776 1098 aaKnown RBP10.46□□□□□ -0.74
EPHA4-203ENST00000409938 ZFYVE16Q7Z3T8 1539 aa10.45□□□□□ -0.74
EPHA4-203ENST00000409938 MS4A1P11836 297 aa10.45□□□□□ -0.74
EPHA4-203ENST00000409938 TET3O43151 1660 aa10.45□□□□□ -0.74
EPHA4-203ENST00000409938 IFT172Q9UG01 1749 aa10.45□□□□□ -0.74
EPHA4-203ENST00000409938 CNGB1Q14028 1251 aaPredicted RBP10.45□□□□□ -0.74
EPHA4-203ENST00000409938 RTEL1-TNFRSF6BF6WH68 1400 aa10.44□□□□□ -0.74
EPHA4-203ENST00000409938 ZNF521Q96K83 1311 aa10.44□□□□□ -0.74
EPHA4-203ENST00000409938 INO80Q9ULG1 1556 aaPredicted RBP10.43□□□□□ -0.74
EPHA4-203ENST00000409938 CDCA7LQ96GN5 454 aa10.43□□□□□ -0.74
EPHA4-203ENST00000409938 PANK3Q9H999 370 aa10.43□□□□□ -0.74
EPHA4-203ENST00000409938 SENP3-EIF4A1A0A087X0R7 540 aa10.43□□□□□ -0.74
EPHA4-203ENST00000409938 NPC1L1Q9UHC9 1359 aa10.43□□□□□ -0.74
EPHA4-203ENST00000409938 ANP32AP39687 249 aaKnown RBP10.43□□□□□ -0.74
EPHA4-203ENST00000409938 BACH2Q9BYV9 841 aa10.43□□□□□ -0.74
EPHA4-203ENST00000409938 MYO3AQ8NEV4 1616 aa10.42□□□□□ -0.74
EPHA4-203ENST00000409938 PIK3C2GO75747 1445 aa10.42□□□□□ -0.74
EPHA4-203ENST00000409938 DEKP35659 375 aaKnown RBP10.42□□□□□ -0.74
EPHA4-203ENST00000409938 TRAPPC8Q9Y2L5 1435 aa10.42□□□□□ -0.74
EPHA4-203ENST00000409938 SCAF11Q99590 1463 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms