RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 DCAF11Q8TEB1 546 aa13.97□□□□□ -0.17
CUL1-202ENST00000409469 KDM5DQ9BY66 1539 aa13.96□□□□□ -0.17
CUL1-202ENST00000409469 MAST1Q9Y2H9 1570 aa13.96□□□□□ -0.17
CUL1-202ENST00000409469 CYB5RLQ6IPT4 315 aa13.96□□□□□ -0.18
CUL1-202ENST00000409469 CNGB1Q14028 1251 aaPredicted RBP13.95□□□□□ -0.18
CUL1-202ENST00000409469 POLR3GLQ9BT43 218 aa13.95□□□□□ -0.18
CUL1-202ENST00000409469 SCAPERQ9BY12 1400 aa13.95□□□□□ -0.18
CUL1-202ENST00000409469 PLXNC1O60486 1568 aa13.94□□□□□ -0.18
CUL1-202ENST00000409469 ADGRL1O94910 1474 aa13.94□□□□□ -0.18
CUL1-202ENST00000409469 ABCA9Q8IUA7 1624 aa13.93□□□□□ -0.18
CUL1-202ENST00000409469 ANP32CO43423 234 aa13.93□□□□□ -0.18
CUL1-202ENST00000409469 DUOX2Q9NRD8 1548 aa13.92□□□□□ -0.18
CUL1-202ENST00000409469 PLA2R1Q13018 1463 aa13.92□□□□□ -0.18
CUL1-202ENST00000409469 ZFYVE16Q7Z3T8 1539 aa13.92□□□□□ -0.18
CUL1-202ENST00000409469 UNC13BO14795 1591 aa13.91□□□□□ -0.18
CUL1-202ENST00000409469 CCDC144AA2RUR9 1427 aa13.91□□□□□ -0.18
CUL1-202ENST00000409469 KIF3BO15066 747 aa13.9□□□□□ -0.18
CUL1-202ENST00000409469 ERBINQ96RT1 1412 aa13.89□□□□□ -0.19
CUL1-202ENST00000409469 KCNA4P22459 653 aa13.89□□□□□ -0.19
CUL1-202ENST00000409469 USP47Q96K76 1375 aa13.88□□□□□ -0.19
CUL1-202ENST00000409469 KIF7Q2M1P5 1343 aa13.88□□□□□ -0.19
CUL1-202ENST00000409469 SPATA31E1Q6ZUB1 1445 aa13.88□□□□□ -0.19
CUL1-202ENST00000409469 CARD11Q9BXL7 1154 aa13.88□□□□□ -0.19
CUL1-202ENST00000409469 CD109Q6YHK3 1445 aa13.88□□□□□ -0.19
CUL1-202ENST00000409469 ATP7AQ04656 1500 aa13.87□□□□□ -0.19
CUL1-202ENST00000409469 CCDC7Q96M83 1385 aa13.87□□□□□ -0.19
CUL1-202ENST00000409469 IQGAP3Q86VI3 1631 aa13.87□□□□□ -0.19
CUL1-202ENST00000409469 ARAP3Q8WWN8 1544 aa13.86□□□□□ -0.19
CUL1-202ENST00000409469 RAPGEF3O95398 923 aa13.86□□□□□ -0.19
CUL1-202ENST00000409469 NBPF1Q3BBV0 1214 aa13.85□□□□□ -0.19
CUL1-202ENST00000409469 MAGI2Q86UL8 1455 aa13.84□□□□□ -0.19
CUL1-202ENST00000409469 INO80Q9ULG1 1556 aaPredicted RBP13.84□□□□□ -0.19
CUL1-202ENST00000409469 RTEL1-TNFRSF6BF6WH68 1400 aa13.83□□□□□ -0.2
CUL1-202ENST00000409469 CCDC184Q52MB2 194 aa13.83□□□□□ -0.2
CUL1-202ENST00000409469 BCORL1Q5H9F3 1711 aa13.83□□□□□ -0.2
CUL1-202ENST00000409469 ST20-MTHFSA0A0A6YYL1 179 aa13.83□□□□□ -0.2
CUL1-202ENST00000409469 A2MP01023 1474 aa13.82□□□□□ -0.2
CUL1-202ENST00000409469 ROCK2O75116 1388 aaKnown RBP13.82□□□□□ -0.2
CUL1-202ENST00000409469 CNTLNQ9NXG0 1405 aa13.81□□□□□ -0.2
CUL1-202ENST00000409469 UHRF1BP1Q6BDS2 1440 aa13.81□□□□□ -0.2
CUL1-202ENST00000409469 E9PCH4 1651 aa13.81□□□□□ -0.2
CUL1-202ENST00000409469 RALGAPBQ86X10 1494 aa13.8□□□□□ -0.2
CUL1-202ENST00000409469 KDM5CP41229 1560 aa13.8□□□□□ -0.2
CUL1-202ENST00000409469 GGT6Q6P531 493 aa13.8□□□□□ -0.2
CUL1-202ENST00000409469 PODXL2Q9NZ53 605 aa13.8□□□□□ -0.2
CUL1-202ENST00000409469 KIDINS220Q9ULH0 1771 aa13.8□□□□□ -0.2
CUL1-202ENST00000409469 DHX29Q7Z478 1369 aaKnown RBP13.79□□□□□ -0.2
CUL1-202ENST00000409469 ZNF518AQ6AHZ1 1483 aa13.79□□□□□ -0.2
CUL1-202ENST00000409469 PRAG1Q86YV5 1406 aa13.78□□□□□ -0.2
CUL1-202ENST00000409469 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
CUL1-202ENST00000409469 UGGT1Q9NYU2 1555 aa13.78□□□□□ -0.2
CUL1-202ENST00000409469 ATP10AO60312 1499 aa13.78□□□□□ -0.2
CUL1-202ENST00000409469 RIMBP3CA6NJZ7 1639 aa13.78□□□□□ -0.2
CUL1-202ENST00000409469 RIMBP3BA6NNM3 1639 aa13.78□□□□□ -0.2
CUL1-202ENST00000409469 RIMBP3Q9UFD9 1639 aa13.78□□□□□ -0.2
CUL1-202ENST00000409469 CCER2I3L3R5 266 aa13.77□□□□□ -0.21
CUL1-202ENST00000409469 POGZQ7Z3K3 1410 aa13.77□□□□□ -0.21
CUL1-202ENST00000409469 MROH1Q8NDA8 1641 aa13.75□□□□□ -0.21
CUL1-202ENST00000409469 FAM69CQ0P6D2 419 aa13.75□□□□□ -0.21
CUL1-202ENST00000409469 PRKRIP1Q9H875 184 aaPredicted RBP13.75□□□□□ -0.21
CUL1-202ENST00000409469 KANK1Q14678 1352 aa13.75□□□□□ -0.21
CUL1-202ENST00000409469 DEPDC5O75140 1603 aa13.74□□□□□ -0.21
CUL1-202ENST00000409469 SENP3-EIF4A1A0A087X0R7 540 aa13.74□□□□□ -0.21
CUL1-202ENST00000409469 SENP3Q9H4L4 574 aaPredicted RBP13.73□□□□□ -0.21
CUL1-202ENST00000409469 CLTCL1P53675 1640 aa13.73□□□□□ -0.21
CUL1-202ENST00000409469 TRPM1Q7Z4N2 1603 aa13.73□□□□□ -0.21
CUL1-202ENST00000409469 CFAP65Q6ZU64 1925 aaKnown RBP13.73□□□□□ -0.21
CUL1-202ENST00000409469 CHGAP10645 457 aaKnown RBP13.72□□□□□ -0.21
CUL1-202ENST00000409469 FRMPD1Q5SYB0 1578 aa13.72□□□□□ -0.21
CUL1-202ENST00000409469 FAM9BQ8IZU0 186 aa13.72□□□□□ -0.21
CUL1-202ENST00000409469 SPHKAPQ2M3C7 1700 aa13.71□□□□□ -0.21
CUL1-202ENST00000409469 ABCA6Q8N139 1617 aa13.71□□□□□ -0.21
CUL1-202ENST00000409469 PRDM15P57071 1507 aaPredicted RBP13.71□□□□□ -0.22
CUL1-202ENST00000409469 TRPM2O94759 1503 aa13.7□□□□□ -0.22
CUL1-202ENST00000409469 TET3O43151 1660 aa13.7□□□□□ -0.22
CUL1-202ENST00000409469 CEP152O94986 1710 aa13.7□□□□□ -0.22
CUL1-202ENST00000409469 YEATS2Q9ULM3 1422 aa13.7□□□□□ -0.22
CUL1-202ENST00000409469 HECW2Q9P2P5 1572 aa13.7□□□□□ -0.22
CUL1-202ENST00000409469 HNRNPUQ00839 825 aaKnown RBP eCLIP13.7□□□□□ -0.22
CUL1-202ENST00000409469 VWDEQ8N2E2 1590 aa13.7□□□□□ -0.22
CUL1-202ENST00000409469 POLR1AO95602 1720 aaPredicted RBP13.7□□□□□ -0.22
CUL1-202ENST00000409469 MRS2Q9HD23 443 aa13.69□□□□□ -0.22
CUL1-202ENST00000409469 TSPOAP1O95153 1857 aa13.69□□□□□ -0.22
CUL1-202ENST00000409469 PPRC1Q5VV67 1664 aaKnown RBP13.69□□□□□ -0.22
CUL1-202ENST00000409469 PTPRTO14522 1441 aa13.69□□□□□ -0.22
CUL1-202ENST00000409469 WASHC2CQ9Y4E1 1318 aa13.68□□□□□ -0.22
CUL1-202ENST00000409469 CFAP74Q9C0B2 1584 aa13.67□□□□□ -0.22
CUL1-202ENST00000409469 MLH3Q9UHC1 1453 aa13.67□□□□□ -0.22
CUL1-202ENST00000409469 DISP3Q9P2K9 1392 aa13.67□□□□□ -0.22
CUL1-202ENST00000409469 NUTM2DQ5VT03 806 aaPredicted RBP13.67□□□□□ -0.22
CUL1-202ENST00000409469 EIF2AK4Q9P2K8 1649 aaKnown RBP13.67□□□□□ -0.22
CUL1-202ENST00000409469 EFCAB6Q5THR3 1501 aa13.66□□□□□ -0.22
CUL1-202ENST00000409469 ADGRF5Q8IZF2 1346 aa13.66□□□□□ -0.22
CUL1-202ENST00000409469 NEO1Q92859 1461 aa13.65□□□□□ -0.22
CUL1-202ENST00000409469 TESK2Q96S53 571 aa13.65□□□□□ -0.22
CUL1-202ENST00000409469 MAP3K4Q9Y6R4 1608 aa13.65□□□□□ -0.22
CUL1-202ENST00000409469 NPATQ14207 1427 aa13.65□□□□□ -0.22
CUL1-202ENST00000409469 CFAP70Q5T0N1 1121 aa13.64□□□□□ -0.23
CUL1-202ENST00000409469 GPRASP1Q5JY77 1395 aa13.64□□□□□ -0.23
CUL1-202ENST00000409469 TAOK2Q9UL54 1235 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms