RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 ABCC10Q5T3U5 1492 aa11.41□□□□□ -0.58
SH3D19-202ENST00000409252 TXNDC2Q86VQ3 553 aa11.41□□□□□ -0.58
SH3D19-202ENST00000409252 DHX29Q7Z478 1369 aaKnown RBP11.41□□□□□ -0.58
SH3D19-202ENST00000409252 PPM1GO15355 546 aaPredicted RBP11.4□□□□□ -0.58
SH3D19-202ENST00000409252 HSPA5P11021 654 aaKnown RBP11.4□□□□□ -0.58
SH3D19-202ENST00000409252 A0A0G2JS52 829 aa11.4□□□□□ -0.58
SH3D19-202ENST00000409252 WDR43Q15061 677 aaKnown RBP eCLIP11.4□□□□□ -0.58
SH3D19-202ENST00000409252 ZCCHC11Q5TAX3 1644 aaKnown RBP11.4□□□□□ -0.58
SH3D19-202ENST00000409252 NAIPQ13075 1403 aa11.4□□□□□ -0.59
SH3D19-202ENST00000409252 SLC52A1Q9NWF4 448 aa11.4□□□□□ -0.59
SH3D19-202ENST00000409252 NCOA1Q15788 1441 aa11.39□□□□□ -0.59
SH3D19-202ENST00000409252 NUTM2FA1L443 756 aa11.38□□□□□ -0.59
SH3D19-202ENST00000409252 CEBPAP49715 358 aaPredicted RBP11.38□□□□□ -0.59
SH3D19-202ENST00000409252 A2MP01023 1474 aa11.38□□□□□ -0.59
SH3D19-202ENST00000409252 HDGFL2Q7Z4V5 671 aaPredicted RBP11.38□□□□□ -0.59
SH3D19-202ENST00000409252 PAK3O75914 559 aaPredicted RBP11.38□□□□□ -0.59
SH3D19-202ENST00000409252 RIMBP3CA6NJZ7 1639 aa11.38□□□□□ -0.59
SH3D19-202ENST00000409252 RIMBP3BA6NNM3 1639 aa11.38□□□□□ -0.59
SH3D19-202ENST00000409252 RIMBP3Q9UFD9 1639 aa11.38□□□□□ -0.59
SH3D19-202ENST00000409252 SOX12O15370 315 aa11.37□□□□□ -0.59
SH3D19-202ENST00000409252 FAM9BQ8IZU0 186 aa11.37□□□□□ -0.59
SH3D19-202ENST00000409252 PPP6R1Q9UPN7 881 aa11.36□□□□□ -0.59
SH3D19-202ENST00000409252 NEO1Q92859 1461 aa11.36□□□□□ -0.59
SH3D19-202ENST00000409252 CFAP53Q96M91 514 aa11.36□□□□□ -0.59
SH3D19-202ENST00000409252 TNNT2P45379 298 aaPredicted RBP11.36□□□□□ -0.59
SH3D19-202ENST00000409252 MRS2Q9HD23 443 aa11.36□□□□□ -0.59
SH3D19-202ENST00000409252 ANKLE2Q86XL3 938 aa11.35□□□□□ -0.59
SH3D19-202ENST00000409252 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.35□□□□□ -0.59
SH3D19-202ENST00000409252 NGDNQ8NEJ9 315 aaKnown RBP11.35□□□□□ -0.59
SH3D19-202ENST00000409252 DUOX2Q9NRD8 1548 aa11.34□□□□□ -0.59
SH3D19-202ENST00000409252 CFAP74Q9C0B2 1584 aa11.34□□□□□ -0.59
SH3D19-202ENST00000409252 FBXO31Q5XUX0 539 aaPredicted RBP11.34□□□□□ -0.59
SH3D19-202ENST00000409252 STAC3Q96MF2 364 aa11.34□□□□□ -0.59
SH3D19-202ENST00000409252 CC2D1BQ5T0F9 858 aaKnown RBP11.34□□□□□ -0.59
SH3D19-202ENST00000409252 MINK1Q8N4C8 1332 aaPredicted RBP11.34□□□□□ -0.59
SH3D19-202ENST00000409252 ERBINQ96RT1 1412 aa11.33□□□□□ -0.6
SH3D19-202ENST00000409252 TSPOAP1O95153 1857 aa11.33□□□□□ -0.6
SH3D19-202ENST00000409252 MAGI3Q5TCQ9 1506 aa11.32□□□□□ -0.6
SH3D19-202ENST00000409252 MYO5CQ9NQX4 1742 aa11.32□□□□□ -0.6
SH3D19-202ENST00000409252 TCOF1Q13428 1488 aaKnown RBP11.32□□□□□ -0.6
SH3D19-202ENST00000409252 MYT1Q01538 1121 aa11.32□□□□□ -0.6
SH3D19-202ENST00000409252 CANXP27824 592 aaKnown RBP11.32□□□□□ -0.6
SH3D19-202ENST00000409252 SALL2Q9Y467 1007 aaPredicted RBP11.32□□□□□ -0.6
SH3D19-202ENST00000409252 TMEM132EQ6IEE7 984 aa11.31□□□□□ -0.6
SH3D19-202ENST00000409252 TERF2IPQ9NYB0 399 aa11.31□□□□□ -0.6
SH3D19-202ENST00000409252 ATP7AQ04656 1500 aa11.3□□□□□ -0.6
SH3D19-202ENST00000409252 RTEL1-TNFRSF6BF6WH68 1400 aa11.3□□□□□ -0.6
SH3D19-202ENST00000409252 ATP10AO60312 1499 aa11.3□□□□□ -0.6
SH3D19-202ENST00000409252 ATF3P18847 181 aa11.3□□□□□ -0.6
SH3D19-202ENST00000409252 EVC2Q86UK5 1308 aa11.29□□□□□ -0.6
SH3D19-202ENST00000409252 SHANK2Q9UPX8 1470 aa11.29□□□□□ -0.6
SH3D19-202ENST00000409252 ST20-MTHFSA0A0A6YYL1 179 aa11.29□□□□□ -0.6
SH3D19-202ENST00000409252 TTC37Q6PGP7 1564 aa11.29□□□□□ -0.6
SH3D19-202ENST00000409252 TNRQ92752 1358 aa11.29□□□□□ -0.6
SH3D19-202ENST00000409252 MORC1Q86VD1 984 aa11.29□□□□□ -0.6
SH3D19-202ENST00000409252 ADCY10Q96PN6 1610 aa11.29□□□□□ -0.6
SH3D19-202ENST00000409252 ZFYVE16Q7Z3T8 1539 aa11.29□□□□□ -0.6
SH3D19-202ENST00000409252 PROSER2Q86WR7 435 aaPredicted RBP11.29□□□□□ -0.6
SH3D19-202ENST00000409252 SLC26A8Q96RN1 970 aa11.29□□□□□ -0.6
SH3D19-202ENST00000409252 CFAP70Q5T0N1 1121 aa11.29□□□□□ -0.6
SH3D19-202ENST00000409252 PTPRKQ15262 1439 aa11.28□□□□□ -0.6
SH3D19-202ENST00000409252 USP47Q96K76 1375 aa11.28□□□□□ -0.6
SH3D19-202ENST00000409252 HNRNPUQ00839 825 aaKnown RBP eCLIP11.27□□□□□ -0.6
SH3D19-202ENST00000409252 RPGRIP1LQ68CZ1 1315 aa11.27□□□□□ -0.6
SH3D19-202ENST00000409252 SHROOM2Q13796 1616 aa11.27□□□□□ -0.6
SH3D19-202ENST00000409252 NUDCQ9Y266 331 aa11.27□□□□□ -0.6
SH3D19-202ENST00000409252 CENPJQ9HC77 1338 aaPredicted RBP11.27□□□□□ -0.6
SH3D19-202ENST00000409252 MAPKBP1O60336 1514 aa11.26□□□□□ -0.61
SH3D19-202ENST00000409252 IDI1Q13907 227 aa11.26□□□□□ -0.61
SH3D19-202ENST00000409252 DNMT1P26358 1616 aaKnown RBP11.26□□□□□ -0.61
SH3D19-202ENST00000409252 ANKRD30BQ9BXX2 1392 aa11.26□□□□□ -0.61
SH3D19-202ENST00000409252 FAM135AQ9P2D6 1515 aa11.25□□□□□ -0.61
SH3D19-202ENST00000409252 U2SURPO15042 1029 aaKnown RBP11.25□□□□□ -0.61
SH3D19-202ENST00000409252 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.25□□□□□ -0.61
SH3D19-202ENST00000409252 CSB-PGBD3P0DP91 1061 aa11.24□□□□□ -0.61
SH3D19-202ENST00000409252 MAPK8IP3Q9UPT6 1336 aa11.23□□□□□ -0.61
SH3D19-202ENST00000409252 YEATS2Q9ULM3 1422 aa11.23□□□□□ -0.61
SH3D19-202ENST00000409252 CNTLNQ9NXG0 1405 aa11.23□□□□□ -0.61
SH3D19-202ENST00000409252 KTN1Q86UP2 1357 aaKnown RBP11.22□□□□□ -0.61
SH3D19-202ENST00000409252 PREX2Q70Z35 1606 aa11.22□□□□□ -0.61
SH3D19-202ENST00000409252 CCDC9Q9Y3X0 531 aaKnown RBP11.22□□□□□ -0.61
SH3D19-202ENST00000409252 SAMD9LQ8IVG5 1584 aa11.21□□□□□ -0.61
SH3D19-202ENST00000409252 PRAM1Q96QH2 718 aa11.21□□□□□ -0.61
SH3D19-202ENST00000409252 PSME1Q06323 249 aa11.21□□□□□ -0.61
SH3D19-202ENST00000409252 ZMYM3Q14202 1370 aa11.21□□□□□ -0.61
SH3D19-202ENST00000409252 ABCC1P33527 1531 aa11.21□□□□□ -0.62
SH3D19-202ENST00000409252 NPM2Q86SE8 214 aaKnown RBP11.21□□□□□ -0.62
SH3D19-202ENST00000409252 MIER1Q8N108 512 aa11.21□□□□□ -0.62
SH3D19-202ENST00000409252 KDM6BO15054 1643 aa11.21□□□□□ -0.62
SH3D19-202ENST00000409252 DMRT2Q9Y5R5 561 aa11.2□□□□□ -0.62
SH3D19-202ENST00000409252 ARHGEF5Q12774 1597 aa11.19□□□□□ -0.62
SH3D19-202ENST00000409252 NBPF1Q3BBV0 1214 aa11.19□□□□□ -0.62
SH3D19-202ENST00000409252 CABP2Q9NPB3 220 aa11.18□□□□□ -0.62
SH3D19-202ENST00000409252 ADGRL2O95490 1459 aa11.18□□□□□ -0.62
SH3D19-202ENST00000409252 NEUROD2Q15784 382 aa11.18□□□□□ -0.62
SH3D19-202ENST00000409252 ZBTB47Q9UFB7 747 aaPredicted RBP11.18□□□□□ -0.62
SH3D19-202ENST00000409252 MAGI2Q86UL8 1455 aa11.17□□□□□ -0.62
SH3D19-202ENST00000409252 ESCO1Q5FWF5 840 aa11.17□□□□□ -0.62
SH3D19-202ENST00000409252 HSPA2P54652 639 aa11.17□□□□□ -0.62
SH3D19-202ENST00000409252 AMPHP49418 695 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms