RNA–Protein interactions for RNA: ENST00000408909.6

TRPM3-215, Transcript of transient receptor potential cation channel subfamily M member 3, human

APPRIS ALT2 TSL 5 BASIC

Gene TRPM3, Length 4,701 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPM3-215	ENST00000408909	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.71	□□□□□ -0.54
TRPM3-215	ENST00000408909	AK7	Q96M32	723 aa		11.7	□□□□□ -0.54
TRPM3-215	ENST00000408909	MORC1	Q86VD1	984 aa		11.7	□□□□□ -0.54
TRPM3-215	ENST00000408909	KRI1	Q8N9T8	703 aa	Known RBP	11.7	□□□□□ -0.54
TRPM3-215	ENST00000408909	CCAR2	Q8N163	923 aa	Known RBP	11.69	□□□□□ -0.54
TRPM3-215	ENST00000408909	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.69	□□□□□ -0.54
TRPM3-215	ENST00000408909	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
TRPM3-215	ENST00000408909	HSP90B2P	Q58FF3	399 aa		11.68	□□□□□ -0.54
TRPM3-215	ENST00000408909	MAP7D2	Q96T17	732 aa		11.68	□□□□□ -0.54
TRPM3-215	ENST00000408909	PES1	O00541	588 aa	Known RBP	11.68	□□□□□ -0.54
TRPM3-215	ENST00000408909	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.68	□□□□□ -0.54
TRPM3-215	ENST00000408909	CREBRF	Q8IUR6	639 aa		11.68	□□□□□ -0.54
TRPM3-215	ENST00000408909	RUFY1	Q96T51	708 aa		11.68	□□□□□ -0.54
TRPM3-215	ENST00000408909	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.68	□□□□□ -0.54
TRPM3-215	ENST00000408909	FHAD1	B1AJZ9	1412 aa		11.68	□□□□□ -0.54
TRPM3-215	ENST00000408909	HSPA5	P11021	654 aa	Known RBP	11.68	□□□□□ -0.54
TRPM3-215	ENST00000408909	RDX	P35241	583 aa	Known RBP	11.68	□□□□□ -0.54
TRPM3-215	ENST00000408909	TAF7L	Q5H9L4	462 aa		11.67	□□□□□ -0.54
TRPM3-215	ENST00000408909	NFKBIB	Q15653	356 aa		11.67	□□□□□ -0.54
TRPM3-215	ENST00000408909	ZBED9	Q6R2W3	1325 aa		11.67	□□□□□ -0.54
TRPM3-215	ENST00000408909	CWC15	Q9P013	229 aa	Known RBP	11.67	□□□□□ -0.54
TRPM3-215	ENST00000408909	HOOK1	Q9UJC3	728 aa	Known RBP	11.67	□□□□□ -0.54
TRPM3-215	ENST00000408909	PATL2	C9JE40	543 aa	Known RBP	11.66	□□□□□ -0.54
TRPM3-215	ENST00000408909	AKAP17A	Q02040	695 aa	Known RBP	11.66	□□□□□ -0.54
TRPM3-215	ENST00000408909	SPAG9	O60271	1321 aa	Known RBP	11.66	□□□□□ -0.54
TRPM3-215	ENST00000408909	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.65	□□□□□ -0.54
TRPM3-215	ENST00000408909	RCAN3	Q9UKA8	241 aa		11.65	□□□□□ -0.54
TRPM3-215	ENST00000408909	CCDC173	Q0VFZ6	552 aa		11.65	□□□□□ -0.54
TRPM3-215	ENST00000408909	CC2D1B	Q5T0F9	858 aa	Known RBP	11.65	□□□□□ -0.54
TRPM3-215	ENST00000408909	PDE4A	P27815	886 aa		11.65	□□□□□ -0.55
TRPM3-215	ENST00000408909	ERCC4	Q92889	916 aa	Predicted RBP	11.65	□□□□□ -0.55
TRPM3-215	ENST00000408909	WASHC2A	Q641Q2	1341 aa		11.64	□□□□□ -0.55
TRPM3-215	ENST00000408909	RUSC2	Q8N2Y8	1516 aa		11.64	□□□□□ -0.55
TRPM3-215	ENST00000408909	TRIM6-TRIM34	B2RNG4	842 aa		11.64	□□□□□ -0.55
TRPM3-215	ENST00000408909		H3BQV1	296 aa		11.64	□□□□□ -0.55
TRPM3-215	ENST00000408909	IFFO2	Q5TF58	517 aa		11.64	□□□□□ -0.55
TRPM3-215	ENST00000408909	ITPRIP	Q8IWB1	547 aa		11.64	□□□□□ -0.55
TRPM3-215	ENST00000408909	DDX49	Q9Y6V7	483 aa	Known RBP	11.64	□□□□□ -0.55
TRPM3-215	ENST00000408909	PDE3B	Q13370	1112 aa		11.64	□□□□□ -0.55
TRPM3-215	ENST00000408909	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.64	□□□□□ -0.55
TRPM3-215	ENST00000408909	FAM184A	Q8NB25	1140 aa		11.64	□□□□□ -0.55
TRPM3-215	ENST00000408909	CCDC66	A2RUB6	948 aa		11.63	□□□□□ -0.55
TRPM3-215	ENST00000408909	APBB1	O00213	710 aa		11.63	□□□□□ -0.55
TRPM3-215	ENST00000408909	LMOD3	Q0VAK6	560 aa		11.63	□□□□□ -0.55
TRPM3-215	ENST00000408909	NEXN	Q0ZGT2	675 aa		11.63	□□□□□ -0.55
TRPM3-215	ENST00000408909	SYNE3	Q6ZMZ3	975 aa		11.63	□□□□□ -0.55
TRPM3-215	ENST00000408909	MYO6	Q9UM54	1294 aa		11.63	□□□□□ -0.55
TRPM3-215	ENST00000408909	APP	P05067	770 aa		11.63	□□□□□ -0.55
TRPM3-215	ENST00000408909	ZRSR2	Q15696	482 aa	Known RBP	11.62	□□□□□ -0.55
TRPM3-215	ENST00000408909	MFAP1	P55081	439 aa	Known RBP	11.62	□□□□□ -0.55
TRPM3-215	ENST00000408909	RAPGEF2	Q9Y4G8	1499 aa		11.62	□□□□□ -0.55
TRPM3-215	ENST00000408909		G3V3G9	751 aa		11.62	□□□□□ -0.55
TRPM3-215	ENST00000408909	DCAF8	Q5TAQ9	597 aa		11.62	□□□□□ -0.55
TRPM3-215	ENST00000408909	KTN1	Q86UP2	1357 aa	Known RBP	11.62	□□□□□ -0.55
TRPM3-215	ENST00000408909	SRPK2	P78362	688 aa	Known RBP	11.62	□□□□□ -0.55
TRPM3-215	ENST00000408909	RALBP1	Q15311	655 aa		11.62	□□□□□ -0.55
TRPM3-215	ENST00000408909	DIAPH3	Q9NSV4	1193 aa		11.62	□□□□□ -0.55
TRPM3-215	ENST00000408909	ARHGAP35	Q9NRY4	1499 aa		11.61	□□□□□ -0.55
TRPM3-215	ENST00000408909	WASHC2C	Q9Y4E1	1318 aa		11.61	□□□□□ -0.55
TRPM3-215	ENST00000408909		H0YHG0	523 aa		11.61	□□□□□ -0.55
TRPM3-215	ENST00000408909	HOMER1	Q86YM7	354 aa		11.61	□□□□□ -0.55
TRPM3-215	ENST00000408909	KANK1	Q14678	1352 aa		11.61	□□□□□ -0.55
TRPM3-215	ENST00000408909	TOMM22	Q9NS69	142 aa		11.61	□□□□□ -0.55
TRPM3-215	ENST00000408909	VPS53	Q5VIR6	699 aa		11.61	□□□□□ -0.55
TRPM3-215	ENST00000408909	KIF21B	O75037	1637 aa		11.6	□□□□□ -0.55
TRPM3-215	ENST00000408909	MNS1	Q8NEH6	495 aa		11.6	□□□□□ -0.55
TRPM3-215	ENST00000408909	RBM10	P98175	930 aa	Known RBP	11.59	□□□□□ -0.55
TRPM3-215	ENST00000408909	TCEAL9	Q9UHQ7	104 aa		11.59	□□□□□ -0.55
TRPM3-215	ENST00000408909	RRBP1	Q9P2E9	1410 aa	Known RBP	11.59	□□□□□ -0.55
TRPM3-215	ENST00000408909	TRIM29	Q14134	588 aa		11.58	□□□□□ -0.55
TRPM3-215	ENST00000408909	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.58	□□□□□ -0.56
TRPM3-215	ENST00000408909	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
TRPM3-215	ENST00000408909	RUFY2	Q8WXA3	655 aa		11.58	□□□□□ -0.56
TRPM3-215	ENST00000408909	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.58	□□□□□ -0.56
TRPM3-215	ENST00000408909	FRAT2	O75474	233 aa	Predicted RBP	11.58	□□□□□ -0.56
TRPM3-215	ENST00000408909	ODF2	Q5BJF6	829 aa		11.58	□□□□□ -0.56
TRPM3-215	ENST00000408909	CAGE1	Q8TC20	777 aa		11.57	□□□□□ -0.56
TRPM3-215	ENST00000408909	AMOTL1	Q8IY63	956 aa		11.57	□□□□□ -0.56
TRPM3-215	ENST00000408909	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.57	□□□□□ -0.56
TRPM3-215	ENST00000408909	PHLDB1	Q86UU1	1377 aa		11.57	□□□□□ -0.56
TRPM3-215	ENST00000408909	SENP3-EIF4A1	A0A087X0R7	540 aa		11.56	□□□□□ -0.56
TRPM3-215	ENST00000408909	GOLGA6L7	A0A1B0GV03	622 aa		11.56	□□□□□ -0.56
TRPM3-215	ENST00000408909	STK11IP	Q8N1F8	1099 aa		11.56	□□□□□ -0.56
TRPM3-215	ENST00000408909	SMC4	Q9NTJ3	1288 aa		11.56	□□□□□ -0.56
TRPM3-215	ENST00000408909	DHX8	Q14562	1220 aa	Known RBP	11.56	□□□□□ -0.56
TRPM3-215	ENST00000408909	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.56	□□□□□ -0.56
TRPM3-215	ENST00000408909	CHMP3	Q9Y3E7	222 aa		11.56	□□□□□ -0.56
TRPM3-215	ENST00000408909	ZKSCAN1	P17029	563 aa	Predicted RBP	11.55	□□□□□ -0.56
TRPM3-215	ENST00000408909	ZNF592	Q92610	1267 aa		11.55	□□□□□ -0.56
TRPM3-215	ENST00000408909	CNKSR2	Q8WXI2	1034 aa		11.55	□□□□□ -0.56
TRPM3-215	ENST00000408909	REC8	O95072	547 aa		11.55	□□□□□ -0.56
TRPM3-215	ENST00000408909	CSB-PGBD3	P0DP91	1061 aa		11.55	□□□□□ -0.56
TRPM3-215	ENST00000408909	USP8	P40818	1118 aa		11.54	□□□□□ -0.56
TRPM3-215	ENST00000408909	SLC4A3	P48751	1232 aa		11.54	□□□□□ -0.56
TRPM3-215	ENST00000408909	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.54	□□□□□ -0.56
TRPM3-215	ENST00000408909	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.54	□□□□□ -0.56
TRPM3-215	ENST00000408909	SENP3	Q9H4L4	574 aa	Predicted RBP	11.54	□□□□□ -0.56
TRPM3-215	ENST00000408909	GTF2E1	P29083	439 aa	Predicted RBP	11.54	□□□□□ -0.56
TRPM3-215	ENST00000408909	OFD1	O75665	1012 aa		11.53	□□□□□ -0.56
TRPM3-215	ENST00000408909	INCENP	Q9NQS7	918 aa		11.53	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms