RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 SYCP2Q9BX26 1530 aa22.63■■□□□ 1.21
COL23A1-202ENST00000407622 NPM1P06748 294 aaKnown RBP eCLIP22.62■■□□□ 1.21
COL23A1-202ENST00000407622 ASXL2Q76L83 1435 aa22.62■■□□□ 1.21
COL23A1-202ENST00000407622 ST20-MTHFSA0A0A6YYL1 179 aa22.62■■□□□ 1.21
COL23A1-202ENST00000407622 ARID4BQ4LE39 1312 aaPredicted RBP22.61■■□□□ 1.21
COL23A1-202ENST00000407622 PLCH2O75038 1416 aa22.6■■□□□ 1.21
COL23A1-202ENST00000407622 ARHGAP5Q13017 1502 aa22.6■■□□□ 1.21
COL23A1-202ENST00000407622 SENP3-EIF4A1A0A087X0R7 540 aa22.59■■□□□ 1.21
COL23A1-202ENST00000407622 MYO5CQ9NQX4 1742 aa22.58■■□□□ 1.21
COL23A1-202ENST00000407622 ANP32EQ9BTT0 268 aa22.58■■□□□ 1.2
COL23A1-202ENST00000407622 CYB5RLQ6IPT4 315 aa22.57■■□□□ 1.2
COL23A1-202ENST00000407622 PPP4R2Q9NY27 417 aa22.57■■□□□ 1.2
COL23A1-202ENST00000407622 ERICH6BQ5W0A0 696 aa22.56■■□□□ 1.2
COL23A1-202ENST00000407622 RIMBP3CA6NJZ7 1639 aa22.55■■□□□ 1.2
COL23A1-202ENST00000407622 RIMBP3BA6NNM3 1639 aa22.55■■□□□ 1.2
COL23A1-202ENST00000407622 RIMBP3Q9UFD9 1639 aa22.55■■□□□ 1.2
COL23A1-202ENST00000407622 ROCK2O75116 1388 aaKnown RBP22.55■■□□□ 1.2
COL23A1-202ENST00000407622 PLA2R1Q13018 1463 aa22.54■■□□□ 1.2
COL23A1-202ENST00000407622 EFCAB2Q5VUJ9 269 aa22.53■■□□□ 1.2
COL23A1-202ENST00000407622 RSPH4AQ5TD94 716 aa22.53■■□□□ 1.2
COL23A1-202ENST00000407622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.53■■□□□ 1.2
COL23A1-202ENST00000407622 UNC13BO14795 1591 aa22.53■■□□□ 1.2
COL23A1-202ENST00000407622 MAST1Q9Y2H9 1570 aa22.52■■□□□ 1.2
COL23A1-202ENST00000407622 B4GALNT3Q6L9W6 998 aa22.52■■□□□ 1.2
COL23A1-202ENST00000407622 PNISRQ8TF01 805 aaKnown RBP22.52■■□□□ 1.2
COL23A1-202ENST00000407622 CCDC144AA2RUR9 1427 aa22.52■■□□□ 1.2
COL23A1-202ENST00000407622 TRPM1Q7Z4N2 1603 aa22.51■■□□□ 1.19
COL23A1-202ENST00000407622 PRAG1Q86YV5 1406 aa22.51■■□□□ 1.19
COL23A1-202ENST00000407622 RGL3Q3MIN7 710 aa22.51■■□□□ 1.19
COL23A1-202ENST00000407622 E9PCH4 1651 aa22.51■■□□□ 1.19
COL23A1-202ENST00000407622 SMG6Q86US8 1419 aaKnown RBP22.51■■□□□ 1.19
COL23A1-202ENST00000407622 ABCA9Q8IUA7 1624 aa22.49■■□□□ 1.19
COL23A1-202ENST00000407622 PLEKHH2Q8IVE3 1493 aa22.49■■□□□ 1.19
COL23A1-202ENST00000407622 ARAP3Q8WWN8 1544 aa22.49■■□□□ 1.19
COL23A1-202ENST00000407622 NBPF1Q3BBV0 1214 aa22.48■■□□□ 1.19
COL23A1-202ENST00000407622 TMC1Q8TDI8 760 aa22.47■■□□□ 1.19
COL23A1-202ENST00000407622 A2MP01023 1474 aa22.47■■□□□ 1.19
COL23A1-202ENST00000407622 NUDCQ9Y266 331 aa22.46■■□□□ 1.19
COL23A1-202ENST00000407622 PLXNC1O60486 1568 aa22.45■■□□□ 1.19
COL23A1-202ENST00000407622 IQGAP3Q86VI3 1631 aa22.44■■□□□ 1.18
COL23A1-202ENST00000407622 MSH5O43196 834 aa22.43■■□□□ 1.18
COL23A1-202ENST00000407622 ABCC1P33527 1531 aa22.42■■□□□ 1.18
COL23A1-202ENST00000407622 MYBBP1AQ9BQG0 1328 aaKnown RBP22.41■■□□□ 1.18
COL23A1-202ENST00000407622 FANCAO15360 1455 aa22.41■■□□□ 1.18
COL23A1-202ENST00000407622 LRPPRCP42704 1394 aaKnown RBP22.4■■□□□ 1.18
COL23A1-202ENST00000407622 BRD4O60885 1362 aaPredicted RBP22.39■■□□□ 1.17
COL23A1-202ENST00000407622 GPRASP1Q5JY77 1395 aa22.38■■□□□ 1.17
COL23A1-202ENST00000407622 DUOX2Q9NRD8 1548 aa22.38■■□□□ 1.17
COL23A1-202ENST00000407622 RALBP1Q15311 655 aa22.38■■□□□ 1.17
COL23A1-202ENST00000407622 RNF123Q5XPI4 1314 aa22.38■■□□□ 1.17
COL23A1-202ENST00000407622 TRAPPC8Q9Y2L5 1435 aa22.38■■□□□ 1.17
COL23A1-202ENST00000407622 MAGI2Q86UL8 1455 aa22.36■■□□□ 1.17
COL23A1-202ENST00000407622 PRDM15P57071 1507 aaPredicted RBP22.36■■□□□ 1.17
COL23A1-202ENST00000407622 CD109Q6YHK3 1445 aa22.36■■□□□ 1.17
COL23A1-202ENST00000407622 DISP3Q9P2K9 1392 aa22.36■■□□□ 1.17
COL23A1-202ENST00000407622 KTN1Q86UP2 1357 aaKnown RBP22.35■■□□□ 1.17
COL23A1-202ENST00000407622 TESK2Q96S53 571 aa22.34■■□□□ 1.17
COL23A1-202ENST00000407622 COL17A1Q9UMD9 1497 aaPredicted RBP22.34■■□□□ 1.17
COL23A1-202ENST00000407622 FANCIQ9NVI1 1328 aa22.34■■□□□ 1.17
COL23A1-202ENST00000407622 ERBINQ96RT1 1412 aa22.33■■□□□ 1.17
COL23A1-202ENST00000407622 PARD3Q8TEW0 1356 aa22.33■■□□□ 1.17
COL23A1-202ENST00000407622 PER1O15534 1290 aaPredicted RBP22.33■■□□□ 1.17
COL23A1-202ENST00000407622 AFAP1Q8N556 730 aa22.33■■□□□ 1.17
COL23A1-202ENST00000407622 LAMC1P11047 1609 aa22.33■■□□□ 1.16
COL23A1-202ENST00000407622 ATP10AO60312 1499 aa22.32■■□□□ 1.16
COL23A1-202ENST00000407622 ADGRL1O94910 1474 aa22.3■■□□□ 1.16
COL23A1-202ENST00000407622 SCAPERQ9BY12 1400 aa22.3■■□□□ 1.16
COL23A1-202ENST00000407622 EIF2AK4Q9P2K8 1649 aaKnown RBP22.29■■□□□ 1.16
COL23A1-202ENST00000407622 NLRP13Q86W25 1043 aa22.28■■□□□ 1.16
COL23A1-202ENST00000407622 SPAG9O60271 1321 aaKnown RBP22.28■■□□□ 1.16
COL23A1-202ENST00000407622 SALL2Q9Y467 1007 aaPredicted RBP22.28■■□□□ 1.16
COL23A1-202ENST00000407622 CC2D1BQ5T0F9 858 aaKnown RBP22.26■■□□□ 1.15
COL23A1-202ENST00000407622 RTEL1-TNFRSF6BF6WH68 1400 aa22.26■■□□□ 1.15
COL23A1-202ENST00000407622 RNF17Q9BXT8 1623 aaKnown RBP22.25■■□□□ 1.15
COL23A1-202ENST00000407622 PANK3Q9H999 370 aa22.24■■□□□ 1.15
COL23A1-202ENST00000407622 CCDC136Q96JN2 1154 aa22.23■■□□□ 1.15
COL23A1-202ENST00000407622 GLI2P10070 1586 aa22.22■■□□□ 1.15
COL23A1-202ENST00000407622 ZFYVE16Q7Z3T8 1539 aa22.22■■□□□ 1.15
COL23A1-202ENST00000407622 CFAP74Q9C0B2 1584 aa22.21■■□□□ 1.15
COL23A1-202ENST00000407622 MAP3K4Q9Y6R4 1608 aa22.2■■□□□ 1.14
COL23A1-202ENST00000407622 MADDQ8WXG6 1647 aa22.19■■□□□ 1.14
COL23A1-202ENST00000407622 TMF1P82094 1093 aa22.19■■□□□ 1.14
COL23A1-202ENST00000407622 FAM69CQ0P6D2 419 aa22.19■■□□□ 1.14
COL23A1-202ENST00000407622 NEO1Q92859 1461 aa22.18■■□□□ 1.14
COL23A1-202ENST00000407622 ZNF518AQ6AHZ1 1483 aa22.17■■□□□ 1.14
COL23A1-202ENST00000407622 INO80Q9ULG1 1556 aaPredicted RBP22.17■■□□□ 1.14
COL23A1-202ENST00000407622 ATP7AQ04656 1500 aa22.17■■□□□ 1.14
COL23A1-202ENST00000407622 DIP2BQ9P265 1576 aa22.16■■□□□ 1.14
COL23A1-202ENST00000407622 RRP1P56182 461 aaKnown RBP22.16■■□□□ 1.14
COL23A1-202ENST00000407622 CDCA7LQ96GN5 454 aa22.15■■□□□ 1.14
COL23A1-202ENST00000407622 TRPM2O94759 1503 aa22.15■■□□□ 1.14
COL23A1-202ENST00000407622 WASHC2CQ9Y4E1 1318 aa22.15■■□□□ 1.14
COL23A1-202ENST00000407622 CLTCL1P53675 1640 aa22.15■■□□□ 1.14
COL23A1-202ENST00000407622 POGZQ7Z3K3 1410 aa22.15■■□□□ 1.14
COL23A1-202ENST00000407622 SPHKAPQ2M3C7 1700 aa22.14■■□□□ 1.14
COL23A1-202ENST00000407622 IQGAP1P46940 1657 aa22.14■■□□□ 1.13
COL23A1-202ENST00000407622 CEP152O94986 1710 aa22.14■■□□□ 1.13
COL23A1-202ENST00000407622 RCAN3Q9UKA8 241 aa22.13■■□□□ 1.13
COL23A1-202ENST00000407622 MYT1LQ9UL68 1186 aa22.13■■□□□ 1.13
COL23A1-202ENST00000407622 DEPDC5O75140 1603 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms