RNA–Protein interactions for RNA: ENST00000407540.7

MATN3-201, Transcript of matrilin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene MATN3, Length 2,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3-201ENST00000407540 TMC1Q8TDI8 760 aa23.36■■□□□ 1.33
MATN3-201ENST00000407540 TTC37Q6PGP7 1564 aa23.36■■□□□ 1.33
MATN3-201ENST00000407540 PNISRQ8TF01 805 aaKnown RBP23.36■■□□□ 1.33
MATN3-201ENST00000407540 ARHGAP5Q13017 1502 aa23.35■■□□□ 1.33
MATN3-201ENST00000407540 ARHGEF12Q9NZN5 1544 aa23.35■■□□□ 1.33
MATN3-201ENST00000407540 PREX2Q70Z35 1606 aa23.34■■□□□ 1.33
MATN3-201ENST00000407540 CHD1O14646 1710 aa23.34■■□□□ 1.33
MATN3-201ENST00000407540 ARID4BQ4LE39 1312 aaPredicted RBP23.33■■□□□ 1.33
MATN3-201ENST00000407540 PLA2R1Q13018 1463 aa23.33■■□□□ 1.32
MATN3-201ENST00000407540 CCDC144AA2RUR9 1427 aa23.32■■□□□ 1.32
MATN3-201ENST00000407540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.32■■□□□ 1.32
MATN3-201ENST00000407540 MSH5O43196 834 aa23.32■■□□□ 1.32
MATN3-201ENST00000407540 PLEKHH2Q8IVE3 1493 aa23.31■■□□□ 1.32
MATN3-201ENST00000407540 RSPH4AQ5TD94 716 aa23.29■■□□□ 1.32
MATN3-201ENST00000407540 SALL2Q9Y467 1007 aaPredicted RBP23.29■■□□□ 1.32
MATN3-201ENST00000407540 PRAG1Q86YV5 1406 aa23.28■■□□□ 1.32
MATN3-201ENST00000407540 ERICH6BQ5W0A0 696 aa23.27■■□□□ 1.32
MATN3-201ENST00000407540 NUDCQ9Y266 331 aa23.27■■□□□ 1.32
MATN3-201ENST00000407540 SMG6Q86US8 1419 aaKnown RBP23.26■■□□□ 1.31
MATN3-201ENST00000407540 A2MP01023 1474 aa23.23■■□□□ 1.31
MATN3-201ENST00000407540 MYBBP1AQ9BQG0 1328 aaKnown RBP23.22■■□□□ 1.31
MATN3-201ENST00000407540 CC2D1BQ5T0F9 858 aaKnown RBP23.2■■□□□ 1.3
MATN3-201ENST00000407540 DISP3Q9P2K9 1392 aa23.19■■□□□ 1.3
MATN3-201ENST00000407540 ABCC2Q92887 1545 aa23.19■■□□□ 1.3
MATN3-201ENST00000407540 TRPM1Q7Z4N2 1603 aa23.18■■□□□ 1.3
MATN3-201ENST00000407540 SHROOM2Q13796 1616 aa23.17■■□□□ 1.3
MATN3-201ENST00000407540 RALBP1Q15311 655 aa23.17■■□□□ 1.3
MATN3-201ENST00000407540 TESK2Q96S53 571 aa23.17■■□□□ 1.3
MATN3-201ENST00000407540 PER1O15534 1290 aaPredicted RBP23.17■■□□□ 1.3
MATN3-201ENST00000407540 AFAP1Q8N556 730 aa23.16■■□□□ 1.3
MATN3-201ENST00000407540 LRPPRCP42704 1394 aaKnown RBP23.16■■□□□ 1.3
MATN3-201ENST00000407540 UNC13BO14795 1591 aa23.16■■□□□ 1.3
MATN3-201ENST00000407540 TRAPPC8Q9Y2L5 1435 aa23.15■■□□□ 1.3
MATN3-201ENST00000407540 BRD4O60885 1362 aaPredicted RBP23.15■■□□□ 1.3
MATN3-201ENST00000407540 MYO5CQ9NQX4 1742 aa23.13■■□□□ 1.29
MATN3-201ENST00000407540 MAST1Q9Y2H9 1570 aa23.13■■□□□ 1.29
MATN3-201ENST00000407540 EFCAB2Q5VUJ9 269 aa23.13■■□□□ 1.29
MATN3-201ENST00000407540 PANK3Q9H999 370 aa23.13■■□□□ 1.29
MATN3-201ENST00000407540 RNF123Q5XPI4 1314 aa23.12■■□□□ 1.29
MATN3-201ENST00000407540 E9PCH4 1651 aa23.12■■□□□ 1.29
MATN3-201ENST00000407540 PLCH2O75038 1416 aa23.11■■□□□ 1.29
MATN3-201ENST00000407540 KTN1Q86UP2 1357 aaKnown RBP23.11■■□□□ 1.29
MATN3-201ENST00000407540 GPRASP1Q5JY77 1395 aa23.1■■□□□ 1.29
MATN3-201ENST00000407540 NLRP13Q86W25 1043 aa23.1■■□□□ 1.29
MATN3-201ENST00000407540 CCDC136Q96JN2 1154 aa23.1■■□□□ 1.29
MATN3-201ENST00000407540 FANCIQ9NVI1 1328 aa23.09■■□□□ 1.29
MATN3-201ENST00000407540 PARD3Q8TEW0 1356 aa23.09■■□□□ 1.29
MATN3-201ENST00000407540 IQGAP3Q86VI3 1631 aa23.09■■□□□ 1.29
MATN3-201ENST00000407540 DUOX2Q9NRD8 1548 aa23.08■■□□□ 1.29
MATN3-201ENST00000407540 PLXNC1O60486 1568 aa23.08■■□□□ 1.29
MATN3-201ENST00000407540 CDCA7LQ96GN5 454 aa23.07■■□□□ 1.28
MATN3-201ENST00000407540 COL17A1Q9UMD9 1497 aaPredicted RBP23.06■■□□□ 1.28
MATN3-201ENST00000407540 ZCCHC11Q5TAX3 1644 aaKnown RBP23.06■■□□□ 1.28
MATN3-201ENST00000407540 ERBINQ96RT1 1412 aa23.06■■□□□ 1.28
MATN3-201ENST00000407540 SPAG9O60271 1321 aaKnown RBP23.04■■□□□ 1.28
MATN3-201ENST00000407540 PRDM15P57071 1507 aaPredicted RBP23.04■■□□□ 1.28
MATN3-201ENST00000407540 TMF1P82094 1093 aa23.02■■□□□ 1.28
MATN3-201ENST00000407540 MAGI2Q86UL8 1455 aa23.01■■□□□ 1.27
MATN3-201ENST00000407540 ABCC1P33527 1531 aa23■■□□□ 1.27
MATN3-201ENST00000407540 MYT1LQ9UL68 1186 aa23■■□□□ 1.27
MATN3-201ENST00000407540 EXOC6Q8TAG9 804 aa23■■□□□ 1.27
MATN3-201ENST00000407540 ERICH6Q7L0X2 663 aa22.99■■□□□ 1.27
MATN3-201ENST00000407540 ATP10AO60312 1499 aa22.99■■□□□ 1.27
MATN3-201ENST00000407540 RRP1P56182 461 aaKnown RBP22.98■■□□□ 1.27
MATN3-201ENST00000407540 RCAN3Q9UKA8 241 aa22.98■■□□□ 1.27
MATN3-201ENST00000407540 PLIN1O60240 522 aa22.95■■□□□ 1.26
MATN3-201ENST00000407540 CLASP1Q7Z460 1538 aa22.94■■□□□ 1.26
MATN3-201ENST00000407540 KIF3BO15066 747 aa22.93■■□□□ 1.26
MATN3-201ENST00000407540 ADAMTS8Q9UP79 889 aa22.91■■□□□ 1.26
MATN3-201ENST00000407540 EIF2AK4Q9P2K8 1649 aaKnown RBP22.91■■□□□ 1.26
MATN3-201ENST00000407540 UHRF1BP1LA0JNW5 1464 aa22.91■■□□□ 1.26
MATN3-201ENST00000407540 LAMC1P11047 1609 aa22.9■■□□□ 1.26
MATN3-201ENST00000407540 ZFYVE16Q7Z3T8 1539 aa22.89■■□□□ 1.25
MATN3-201ENST00000407540 WDR7Q9Y4E6 1490 aa22.88■■□□□ 1.25
MATN3-201ENST00000407540 SCAPERQ9BY12 1400 aa22.88■■□□□ 1.25
MATN3-201ENST00000407540 WASHC2CQ9Y4E1 1318 aa22.88■■□□□ 1.25
MATN3-201ENST00000407540 KNSTRNQ9Y448 316 aa22.87■■□□□ 1.25
MATN3-201ENST00000407540 MADDQ8WXG6 1647 aa22.86■■□□□ 1.25
MATN3-201ENST00000407540 CLTCL1P53675 1640 aa22.85■■□□□ 1.25
MATN3-201ENST00000407540 RNF17Q9BXT8 1623 aaKnown RBP22.85■■□□□ 1.25
MATN3-201ENST00000407540 PPP2R1AP30153 589 aa22.84■■□□□ 1.25
MATN3-201ENST00000407540 CFAP70Q5T0N1 1121 aa22.84■■□□□ 1.25
MATN3-201ENST00000407540 FANCAO15360 1455 aa22.84■■□□□ 1.25
MATN3-201ENST00000407540 PAK3O75914 559 aaPredicted RBP22.84■■□□□ 1.25
MATN3-201ENST00000407540 AMER1Q5JTC6 1135 aaPredicted RBP22.84■■□□□ 1.25
MATN3-201ENST00000407540 SKAP1Q86WV1 359 aa22.84■■□□□ 1.25
MATN3-201ENST00000407540 UGGT1Q9NYU2 1555 aa22.84■■□□□ 1.25
MATN3-201ENST00000407540 PDE3BQ13370 1112 aa22.83■■□□□ 1.25
MATN3-201ENST00000407540 TRPM2O94759 1503 aa22.83■■□□□ 1.24
MATN3-201ENST00000407540 RTEL1-TNFRSF6BF6WH68 1400 aa22.82■■□□□ 1.24
MATN3-201ENST00000407540 BLMP54132 1417 aaPredicted RBP22.82■■□□□ 1.24
MATN3-201ENST00000407540 PTPRTO14522 1441 aa22.82■■□□□ 1.24
MATN3-201ENST00000407540 ADGRF5Q8IZF2 1346 aa22.81■■□□□ 1.24
MATN3-201ENST00000407540 SCAF11Q99590 1463 aaKnown RBP22.79■■□□□ 1.24
MATN3-201ENST00000407540 C20orf194Q5TEA3 1177 aa22.78■■□□□ 1.24
MATN3-201ENST00000407540 ATP7AQ04656 1500 aa22.78■■□□□ 1.24
MATN3-201ENST00000407540 SPHKAPQ2M3C7 1700 aa22.78■■□□□ 1.24
MATN3-201ENST00000407540 ADGRL1O94910 1474 aa22.77■■□□□ 1.24
MATN3-201ENST00000407540 IQGAP1P46940 1657 aa22.77■■□□□ 1.24
MATN3-201ENST00000407540 KANK1Q14678 1352 aa22.77■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms