RNA–Protein interactions for RNA: ENST00000406961.5

NCOA1-205, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene NCOA1, Length 7,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-205ENST00000406961 SPRYD3Q8NCJ5 442 aa20.26■□□□□ 0.83
NCOA1-205ENST00000406961 AMPHP49418 695 aa20.25■□□□□ 0.83
NCOA1-205ENST00000406961 EVC2Q86UK5 1308 aa20.25■□□□□ 0.83
NCOA1-205ENST00000406961 LMOD3Q0VAK6 560 aa20.24■□□□□ 0.83
NCOA1-205ENST00000406961 ARAP1Q96P48 1450 aa20.24■□□□□ 0.83
NCOA1-205ENST00000406961 CLUAP1Q96AJ1 413 aa20.24■□□□□ 0.83
NCOA1-205ENST00000406961 NESP48681 1621 aa20.24■□□□□ 0.83
NCOA1-205ENST00000406961 RRP7AQ9Y3A4 280 aaKnown RBP20.23■□□□□ 0.83
NCOA1-205ENST00000406961 PRDM2Q13029 1718 aa20.22■□□□□ 0.83
NCOA1-205ENST00000406961 CGNL1Q0VF96 1302 aa20.22■□□□□ 0.83
NCOA1-205ENST00000406961 CHMP4AQ9BY43 222 aa20.22■□□□□ 0.83
NCOA1-205ENST00000406961 GLIPR1L2Q4G1C9 344 aa20.21■□□□□ 0.83
NCOA1-205ENST00000406961 ZNF330Q9Y3S2 320 aaPredicted RBP20.2■□□□□ 0.82
NCOA1-205ENST00000406961 ANKRD50Q9ULJ7 1429 aa20.2■□□□□ 0.82
NCOA1-205ENST00000406961 MINK1Q8N4C8 1332 aaPredicted RBP20.2■□□□□ 0.82
NCOA1-205ENST00000406961 LTV1Q96GA3 475 aaPredicted RBP20.2■□□□□ 0.82
NCOA1-205ENST00000406961 MRC2Q9UBG0 1479 aa20.19■□□□□ 0.82
NCOA1-205ENST00000406961 PLCB2Q00722 1185 aa20.18■□□□□ 0.82
NCOA1-205ENST00000406961 HMGXB3Q12766 1538 aa20.18■□□□□ 0.82
NCOA1-205ENST00000406961 COG3Q96JB2 828 aa20.17■□□□□ 0.82
NCOA1-205ENST00000406961 KIAA1211Q6ZU35 1233 aa20.17■□□□□ 0.82
NCOA1-205ENST00000406961 TOP2BQ02880 1626 aa20.15■□□□□ 0.82
NCOA1-205ENST00000406961 SLC4A10Q6U841 1118 aa20.15■□□□□ 0.82
NCOA1-205ENST00000406961 GOLGA6L4A6NEF3 574 aa20.15■□□□□ 0.82
NCOA1-205ENST00000406961 FAM69CQ0P6D2 419 aa20.14■□□□□ 0.82
NCOA1-205ENST00000406961 PRXQ9BXM0 1461 aa20.14■□□□□ 0.82
NCOA1-205ENST00000406961 HMMRO75330 724 aa20.14■□□□□ 0.81
NCOA1-205ENST00000406961 ZBED9Q6R2W3 1325 aa20.14■□□□□ 0.81
NCOA1-205ENST00000406961 DNTTIP2Q5QJE6 756 aaKnown RBP20.14■□□□□ 0.81
NCOA1-205ENST00000406961 TOPBP1Q92547 1522 aa20.14■□□□□ 0.81
NCOA1-205ENST00000406961 IFT140Q96RY7 1462 aa20.14■□□□□ 0.81
NCOA1-205ENST00000406961 CC2D2AQ9P2K1 1620 aa20.14■□□□□ 0.81
NCOA1-205ENST00000406961 PRG4Q92954 1404 aaPredicted RBP20.13■□□□□ 0.81
NCOA1-205ENST00000406961 RRBP1Q9P2E9 1410 aaKnown RBP20.13■□□□□ 0.81
NCOA1-205ENST00000406961 CCDC7Q96M83 1385 aa20.12■□□□□ 0.81
NCOA1-205ENST00000406961 MFAP1P55081 439 aaKnown RBP20.12■□□□□ 0.81
NCOA1-205ENST00000406961 EFCAB5A4FU69 1503 aa20.12■□□□□ 0.81
NCOA1-205ENST00000406961 E9PSI1 815 aa20.12■□□□□ 0.81
NCOA1-205ENST00000406961 KIF7Q2M1P5 1343 aa20.12■□□□□ 0.81
NCOA1-205ENST00000406961 ARHGAP5Q13017 1502 aa20.12■□□□□ 0.81
NCOA1-205ENST00000406961 TSHZ2Q9NRE2 1034 aa20.11■□□□□ 0.81
NCOA1-205ENST00000406961 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
NCOA1-205ENST00000406961 POLA1P09884 1462 aaPredicted RBP20.1■□□□□ 0.81
NCOA1-205ENST00000406961 STAC3Q96MF2 364 aa20.1■□□□□ 0.81
NCOA1-205ENST00000406961 HDAC5Q9UQL6 1122 aa20.09■□□□□ 0.81
NCOA1-205ENST00000406961 PLIN1O60240 522 aa20.08■□□□□ 0.8
NCOA1-205ENST00000406961 CCDC9Q9Y3X0 531 aaKnown RBP20.08■□□□□ 0.8
NCOA1-205ENST00000406961 APAF1O14727 1248 aa20.07■□□□□ 0.8
NCOA1-205ENST00000406961 RRP1P56182 461 aaKnown RBP20.07■□□□□ 0.8
NCOA1-205ENST00000406961 BCL2L13Q9BXK5 485 aa20.07■□□□□ 0.8
NCOA1-205ENST00000406961 CHMP3Q9Y3E7 222 aa20.07■□□□□ 0.8
NCOA1-205ENST00000406961 ELL2O00472 640 aaPredicted RBP20.07■□□□□ 0.8
NCOA1-205ENST00000406961 SLKQ9H2G2 1235 aaPredicted RBP20.07■□□□□ 0.8
NCOA1-205ENST00000406961 AFAP1Q8N556 730 aa20.06■□□□□ 0.8
NCOA1-205ENST00000406961 GOLGA6L6A8MZA4 724 aa20.06■□□□□ 0.8
NCOA1-205ENST00000406961 MIA2Q96PC5 1412 aa20.06■□□□□ 0.8
NCOA1-205ENST00000406961 TRIM6-TRIM34B2RNG4 842 aa20.05■□□□□ 0.8
NCOA1-205ENST00000406961 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.05■□□□□ 0.8
NCOA1-205ENST00000406961 EHBP1L1Q8N3D4 1523 aa20.05■□□□□ 0.8
NCOA1-205ENST00000406961 TULP1O00294 542 aaPredicted RBP20.05■□□□□ 0.8
NCOA1-205ENST00000406961 GPATCH3Q96I76 525 aa20.05■□□□□ 0.8
NCOA1-205ENST00000406961 CNTLNQ9NXG0 1405 aa20.04■□□□□ 0.8
NCOA1-205ENST00000406961 DIAPH1O60610 1272 aaKnown RBP20.04■□□□□ 0.8
NCOA1-205ENST00000406961 EXOC6Q8TAG9 804 aa20.04■□□□□ 0.8
NCOA1-205ENST00000406961 L1TD1Q5T7N2 865 aaKnown RBP20.03■□□□□ 0.8
NCOA1-205ENST00000406961 ZKSCAN2Q63HK3 967 aa20.03■□□□□ 0.8
NCOA1-205ENST00000406961 GBP4Q96PP9 640 aa20.03■□□□□ 0.8
NCOA1-205ENST00000406961 GORABQ5T7V8 394 aa20.02■□□□□ 0.8
NCOA1-205ENST00000406961 SNAPC4Q5SXM2 1469 aa20.02■□□□□ 0.8
NCOA1-205ENST00000406961 CENPQQ7L2Z9 268 aaPredicted RBP20.02■□□□□ 0.79
NCOA1-205ENST00000406961 RTN4Q9NQC3 1192 aaKnown RBP20.02■□□□□ 0.79
NCOA1-205ENST00000406961 IPO9Q96P70 1041 aaKnown RBP20.01■□□□□ 0.79
NCOA1-205ENST00000406961 CRBNQ96SW2 442 aa20.01■□□□□ 0.79
NCOA1-205ENST00000406961 TAF7LQ5H9L4 462 aa20.01■□□□□ 0.79
NCOA1-205ENST00000406961 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
NCOA1-205ENST00000406961 GNL2Q13823 731 aaKnown RBP19.99■□□□□ 0.79
NCOA1-205ENST00000406961 DEKP35659 375 aaKnown RBP19.99■□□□□ 0.79
NCOA1-205ENST00000406961 C1orf141Q5JVX7 400 aa19.99■□□□□ 0.79
NCOA1-205ENST00000406961 NAP1L5Q96NT1 182 aaPredicted RBP19.98■□□□□ 0.79
NCOA1-205ENST00000406961 PTMSP20962 102 aa19.98■□□□□ 0.79
NCOA1-205ENST00000406961 COG6Q9Y2V7 657 aa19.97■□□□□ 0.79
NCOA1-205ENST00000406961 WASHC2AQ641Q2 1341 aa19.97■□□□□ 0.79
NCOA1-205ENST00000406961 TMEM132EQ6IEE7 984 aa19.97■□□□□ 0.79
NCOA1-205ENST00000406961 RIPK4P57078 832 aa19.96■□□□□ 0.79
NCOA1-205ENST00000406961 TROQ12816 1431 aaPredicted RBP19.96■□□□□ 0.79
NCOA1-205ENST00000406961 C9orf84Q5VXU9 1444 aa19.96■□□□□ 0.79
NCOA1-205ENST00000406961 NGEFQ8N5V2 710 aa19.96■□□□□ 0.79
NCOA1-205ENST00000406961 HECW1Q76N89 1606 aa19.96■□□□□ 0.79
NCOA1-205ENST00000406961 TIAM1Q13009 1591 aa19.96■□□□□ 0.79
NCOA1-205ENST00000406961 NRDCO43847 1150 aa19.95■□□□□ 0.78
NCOA1-205ENST00000406961 RUNDC1Q96C34 613 aa19.95■□□□□ 0.78
NCOA1-205ENST00000406961 CABP2Q9NPB3 220 aa19.95■□□□□ 0.78
NCOA1-205ENST00000406961 ISY1Q9ULR0 285 aaKnown RBP19.95■□□□□ 0.78
NCOA1-205ENST00000406961 TEFQ10587 303 aa19.93■□□□□ 0.78
NCOA1-205ENST00000406961 CFAP70Q5T0N1 1121 aa19.93■□□□□ 0.78
NCOA1-205ENST00000406961 ANKRD45Q5TZF3 282 aa19.92■□□□□ 0.78
NCOA1-205ENST00000406961 GZF1Q9H116 711 aaPredicted RBP19.92■□□□□ 0.78
NCOA1-205ENST00000406961 GGNBP2Q9H3C7 697 aa19.92■□□□□ 0.78
NCOA1-205ENST00000406961 PLEKHH2Q8IVE3 1493 aa19.91■□□□□ 0.78
NCOA1-205ENST00000406961 HFM1A2PYH4 1435 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms