RNA–Protein interactions for RNA: ENST00000406921.7

ITSN2-203, Transcript of intersectin 2, humanhuman

TSL 1 (best) BASIC

Gene ITSN2, Length 4,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-203ENST00000406921 PRXQ9BXM0 1461 aa19.06■□□□□ 0.64
ITSN2-203ENST00000406921 SPRYD3Q8NCJ5 442 aa19.05■□□□□ 0.64
ITSN2-203ENST00000406921 RAPGEF3O95398 923 aa19.04■□□□□ 0.64
ITSN2-203ENST00000406921 MYBBP1AQ9BQG0 1328 aaKnown RBP19.04■□□□□ 0.64
ITSN2-203ENST00000406921 CALD1Q05682 793 aaKnown RBP19.04■□□□□ 0.64
ITSN2-203ENST00000406921 STK31Q9BXU1 1019 aa19.03■□□□□ 0.64
ITSN2-203ENST00000406921 GOLGA6L22H0YM25 854 aa19.03■□□□□ 0.64
ITSN2-203ENST00000406921 CFAP70Q5T0N1 1121 aa19.03■□□□□ 0.64
ITSN2-203ENST00000406921 SNAPC4Q5SXM2 1469 aa19.02■□□□□ 0.64
ITSN2-203ENST00000406921 COG3Q96JB2 828 aa19.02■□□□□ 0.64
ITSN2-203ENST00000406921 UACAQ9BZF9 1416 aa19.02■□□□□ 0.64
ITSN2-203ENST00000406921 APAF1O14727 1248 aa19.02■□□□□ 0.63
ITSN2-203ENST00000406921 PLIN1O60240 522 aa19.01■□□□□ 0.63
ITSN2-203ENST00000406921 CGNL1Q0VF96 1302 aa19.01■□□□□ 0.63
ITSN2-203ENST00000406921 IFT140Q96RY7 1462 aa19.01■□□□□ 0.63
ITSN2-203ENST00000406921 HMGXB3Q12766 1538 aa19.01■□□□□ 0.63
ITSN2-203ENST00000406921 BICRAQ9NZM4 1560 aa18.99■□□□□ 0.63
ITSN2-203ENST00000406921 SYNJ2O15056 1496 aa18.99■□□□□ 0.63
ITSN2-203ENST00000406921 HSP90AB1P08238 724 aaKnown RBP18.99■□□□□ 0.63
ITSN2-203ENST00000406921 CENPJQ9HC77 1338 aaPredicted RBP18.99■□□□□ 0.63
ITSN2-203ENST00000406921 ARHGAP5Q13017 1502 aa18.99■□□□□ 0.63
ITSN2-203ENST00000406921 KIF7Q2M1P5 1343 aa18.98■□□□□ 0.63
ITSN2-203ENST00000406921 NBPF1Q3BBV0 1214 aa18.98■□□□□ 0.63
ITSN2-203ENST00000406921 FYCO1Q9BQS8 1478 aa18.98■□□□□ 0.63
ITSN2-203ENST00000406921 CABP2Q9NPB3 220 aa18.97■□□□□ 0.63
ITSN2-203ENST00000406921 SCAPERQ9BY12 1400 aa18.97■□□□□ 0.63
ITSN2-203ENST00000406921 TCERG1O14776 1098 aaKnown RBP18.97■□□□□ 0.63
ITSN2-203ENST00000406921 GGNBP2Q9H3C7 697 aa18.96■□□□□ 0.63
ITSN2-203ENST00000406921 CHMP3Q9Y3E7 222 aa18.96■□□□□ 0.63
ITSN2-203ENST00000406921 ERICH3Q5RHP9 1530 aa18.96■□□□□ 0.63
ITSN2-203ENST00000406921 TOP2BQ02880 1626 aa18.96■□□□□ 0.63
ITSN2-203ENST00000406921 NUTM2GQ5VZR2 741 aa18.95■□□□□ 0.62
ITSN2-203ENST00000406921 RWDD1Q9H446 243 aaPredicted RBP18.95■□□□□ 0.62
ITSN2-203ENST00000406921 RBM19Q9Y4C8 960 aaKnown RBP18.94■□□□□ 0.62
ITSN2-203ENST00000406921 TULP1O00294 542 aaPredicted RBP18.93■□□□□ 0.62
ITSN2-203ENST00000406921 NOP58Q9Y2X3 529 aaKnown RBP18.93■□□□□ 0.62
ITSN2-203ENST00000406921 PSME1Q06323 249 aa18.92■□□□□ 0.62
ITSN2-203ENST00000406921 PDE3BQ13370 1112 aa18.91■□□□□ 0.62
ITSN2-203ENST00000406921 LMOD3Q0VAK6 560 aa18.89■□□□□ 0.61
ITSN2-203ENST00000406921 NBPF8Q3BBV2 869 aa18.89■□□□□ 0.61
ITSN2-203ENST00000406921 CCDC7Q96M83 1385 aa18.89■□□□□ 0.61
ITSN2-203ENST00000406921 NECTIN2Q92692 538 aa18.89■□□□□ 0.61
ITSN2-203ENST00000406921 WASHC2AQ641Q2 1341 aa18.88■□□□□ 0.61
ITSN2-203ENST00000406921 HMOX1P09601 288 aa18.88■□□□□ 0.61
ITSN2-203ENST00000406921 TROQ12816 1431 aaPredicted RBP18.88■□□□□ 0.61
ITSN2-203ENST00000406921 PLCB2Q00722 1185 aa18.88■□□□□ 0.61
ITSN2-203ENST00000406921 ZRSR1Q15695 479 aaKnown RBP18.88■□□□□ 0.61
ITSN2-203ENST00000406921 NGEFQ8N5V2 710 aa18.88■□□□□ 0.61
ITSN2-203ENST00000406921 DIAPH1O60610 1272 aaKnown RBP18.87■□□□□ 0.61
ITSN2-203ENST00000406921 TXNDC2Q86VQ3 553 aa18.87■□□□□ 0.61
ITSN2-203ENST00000406921 HSCBQ8IWL3 235 aa18.87■□□□□ 0.61
ITSN2-203ENST00000406921 TEFQ10587 303 aa18.86■□□□□ 0.61
ITSN2-203ENST00000406921 EVA1CP58658 441 aa18.86■□□□□ 0.61
ITSN2-203ENST00000406921 C9orf84Q5VXU9 1444 aa18.86■□□□□ 0.61
ITSN2-203ENST00000406921 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.85■□□□□ 0.61
ITSN2-203ENST00000406921 COG6Q9Y2V7 657 aa18.85■□□□□ 0.61
ITSN2-203ENST00000406921 DNMBPQ6XZF7 1577 aa18.85■□□□□ 0.61
ITSN2-203ENST00000406921 RRBP1Q9P2E9 1410 aaKnown RBP18.85■□□□□ 0.61
ITSN2-203ENST00000406921 EIF2S2P20042 333 aaKnown RBP18.84■□□□□ 0.61
ITSN2-203ENST00000406921 TRIM44Q96DX7 344 aaPredicted RBP18.84■□□□□ 0.61
ITSN2-203ENST00000406921 SLKQ9H2G2 1235 aaPredicted RBP18.84■□□□□ 0.61
ITSN2-203ENST00000406921 CDK13Q14004 1512 aaKnown RBP18.84■□□□□ 0.61
ITSN2-203ENST00000406921 EXOC6Q8TAG9 804 aa18.84■□□□□ 0.61
ITSN2-203ENST00000406921 RIPK4P57078 832 aa18.84■□□□□ 0.61
ITSN2-203ENST00000406921 MFAP1P55081 439 aaKnown RBP18.83■□□□□ 0.61
ITSN2-203ENST00000406921 KIAA1211Q6ZU35 1233 aa18.83■□□□□ 0.61
ITSN2-203ENST00000406921 TRIM6-TRIM34B2RNG4 842 aa18.83■□□□□ 0.6
ITSN2-203ENST00000406921 GORABQ5T7V8 394 aa18.83■□□□□ 0.6
ITSN2-203ENST00000406921 ISY1Q9ULR0 285 aaKnown RBP18.83■□□□□ 0.6
ITSN2-203ENST00000406921 TAF7LQ5H9L4 462 aa18.83■□□□□ 0.6
ITSN2-203ENST00000406921 SLC26A8Q96RN1 970 aa18.82■□□□□ 0.6
ITSN2-203ENST00000406921 SLC12A5Q9H2X9 1139 aa18.82■□□□□ 0.6
ITSN2-203ENST00000406921 C1orf141Q5JVX7 400 aa18.82■□□□□ 0.6
ITSN2-203ENST00000406921 PMFBP1Q8TBY8 1022 aa18.82■□□□□ 0.6
ITSN2-203ENST00000406921 NLRP6P59044 892 aa18.81■□□□□ 0.6
ITSN2-203ENST00000406921 PRAM1Q96QH2 718 aa18.81■□□□□ 0.6
ITSN2-203ENST00000406921 ERICH6BQ5W0A0 696 aa18.81■□□□□ 0.6
ITSN2-203ENST00000406921 ANP32EQ9BTT0 268 aa18.81■□□□□ 0.6
ITSN2-203ENST00000406921 MCCP23508 829 aa18.81■□□□□ 0.6
ITSN2-203ENST00000406921 PTMAP06454 111 aaKnown RBP18.8■□□□□ 0.6
ITSN2-203ENST00000406921 MTHFSP49914 203 aa18.8■□□□□ 0.6
ITSN2-203ENST00000406921 E9PSI1 815 aa18.8■□□□□ 0.6
ITSN2-203ENST00000406921 KIAA0586Q9BVV6 1533 aa18.8■□□□□ 0.6
ITSN2-203ENST00000406921 GTF2E1P29083 439 aaPredicted RBP18.79■□□□□ 0.6
ITSN2-203ENST00000406921 CHMP4AQ9BY43 222 aa18.79■□□□□ 0.6
ITSN2-203ENST00000406921 ZBED9Q6R2W3 1325 aa18.79■□□□□ 0.6
ITSN2-203ENST00000406921 HMMRO75330 724 aa18.79■□□□□ 0.6
ITSN2-203ENST00000406921 SYTL4Q96C24 671 aaPredicted RBP18.79■□□□□ 0.6
ITSN2-203ENST00000406921 PLB1Q6P1J6 1458 aa18.79■□□□□ 0.6
ITSN2-203ENST00000406921 ABCA10Q8WWZ4 1543 aa18.78■□□□□ 0.6
ITSN2-203ENST00000406921 CRBNQ96SW2 442 aa18.78■□□□□ 0.6
ITSN2-203ENST00000406921 EFCAB5A4FU69 1503 aa18.78■□□□□ 0.6
ITSN2-203ENST00000406921 STAC3Q96MF2 364 aa18.77■□□□□ 0.6
ITSN2-203ENST00000406921 ADAMTS8Q9UP79 889 aa18.77■□□□□ 0.6
ITSN2-203ENST00000406921 ATF3P18847 181 aa18.77■□□□□ 0.6
ITSN2-203ENST00000406921 ZKSCAN2Q63HK3 967 aa18.76■□□□□ 0.59
ITSN2-203ENST00000406921 ZNF608Q9ULD9 1512 aaPredicted RBP18.75■□□□□ 0.59
ITSN2-203ENST00000406921 GOLGA6L4A6NEF3 574 aa18.75■□□□□ 0.59
ITSN2-203ENST00000406921 RRP1P56182 461 aaKnown RBP18.75■□□□□ 0.59
ITSN2-203ENST00000406921 NOL8Q76FK4 1167 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms