RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 MPHOSPH9Q99550 1183 aa16.87■□□□□ 0.29
DDX3X-201ENST00000399959 TRIM6-TRIM34B2RNG4 842 aa16.86■□□□□ 0.29
DDX3X-201ENST00000399959 CCDC146Q8IYE0 955 aa16.86■□□□□ 0.29
DDX3X-201ENST00000399959 DIAPH3Q9NSV4 1193 aa16.86■□□□□ 0.29
DDX3X-201ENST00000399959 UBE2Q2Q8WVN8 375 aa16.86■□□□□ 0.29
DDX3X-201ENST00000399959 ATP6V1DQ9Y5K8 247 aa16.86■□□□□ 0.29
DDX3X-201ENST00000399959 CGNL1Q0VF96 1302 aa16.86■□□□□ 0.29
DDX3X-201ENST00000399959 FRAT2O75474 233 aaPredicted RBP16.86■□□□□ 0.29
DDX3X-201ENST00000399959 POGKQ9P215 609 aa16.86■□□□□ 0.29
DDX3X-201ENST00000399959 L3MBTL2Q969R5 705 aa16.85■□□□□ 0.29
DDX3X-201ENST00000399959 CALRP27797 417 aaKnown RBP16.84■□□□□ 0.29
DDX3X-201ENST00000399959 HMMRO75330 724 aa16.83■□□□□ 0.29
DDX3X-201ENST00000399959 NPM1P06748 294 aaKnown RBP eCLIP16.83■□□□□ 0.29
DDX3X-201ENST00000399959 PKD2Q13563 968 aa16.83■□□□□ 0.29
DDX3X-201ENST00000399959 BECN2A8MW95 431 aa16.83■□□□□ 0.28
DDX3X-201ENST00000399959 TRAK2O60296 914 aa16.83■□□□□ 0.28
DDX3X-201ENST00000399959 CCDC34Q96HJ3 373 aa16.83■□□□□ 0.28
DDX3X-201ENST00000399959 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
DDX3X-201ENST00000399959 FOXD4L6Q3SYB3 417 aaPredicted RBP16.82■□□□□ 0.28
DDX3X-201ENST00000399959 FOXD4L3Q6VB84 417 aaPredicted RBP16.82■□□□□ 0.28
DDX3X-201ENST00000399959 FMN1Q68DA7 1419 aa16.82■□□□□ 0.28
DDX3X-201ENST00000399959 PLEKHG5O94827 1062 aa16.81■□□□□ 0.28
DDX3X-201ENST00000399959 ARGLU1Q9NWB6 273 aaPredicted RBP16.81■□□□□ 0.28
DDX3X-201ENST00000399959 CCDC173Q0VFZ6 552 aa16.8■□□□□ 0.28
DDX3X-201ENST00000399959 NUCB2P80303 420 aa16.79■□□□□ 0.28
DDX3X-201ENST00000399959 MCTP1Q6DN14 999 aa16.79■□□□□ 0.28
DDX3X-201ENST00000399959 COG6Q9Y2V7 657 aa16.78■□□□□ 0.28
DDX3X-201ENST00000399959 HMGN5P82970 282 aaKnown RBP16.78■□□□□ 0.28
DDX3X-201ENST00000399959 CWC15Q9P013 229 aaKnown RBP16.78■□□□□ 0.28
DDX3X-201ENST00000399959 A0A0G2JS52 829 aa16.78■□□□□ 0.28
DDX3X-201ENST00000399959 IFT57Q9NWB7 429 aa16.78■□□□□ 0.28
DDX3X-201ENST00000399959 E9PSI1 815 aa16.77■□□□□ 0.28
DDX3X-201ENST00000399959 ANKRD45Q5TZF3 282 aa16.77■□□□□ 0.28
DDX3X-201ENST00000399959 MSH5O43196 834 aa16.77■□□□□ 0.27
DDX3X-201ENST00000399959 CHMP7Q8WUX9 453 aaPredicted RBP16.77■□□□□ 0.27
DDX3X-201ENST00000399959 RTF1Q92541 710 aaKnown RBP16.76■□□□□ 0.27
DDX3X-201ENST00000399959 C22orf23Q9BZE7 217 aa16.76■□□□□ 0.27
DDX3X-201ENST00000399959 HOMER1Q86YM7 354 aa16.76■□□□□ 0.27
DDX3X-201ENST00000399959 SF3A1Q15459 793 aaKnown RBP16.75■□□□□ 0.27
DDX3X-201ENST00000399959 GPATCH3Q96I76 525 aa16.75■□□□□ 0.27
DDX3X-201ENST00000399959 KIF3AQ9Y496 699 aa16.75■□□□□ 0.27
DDX3X-201ENST00000399959 SRPK2P78362 688 aaKnown RBP16.74■□□□□ 0.27
DDX3X-201ENST00000399959 ZKSCAN2Q63HK3 967 aa16.74■□□□□ 0.27
DDX3X-201ENST00000399959 CCDC70Q6NSX1 233 aa16.74■□□□□ 0.27
DDX3X-201ENST00000399959 ISY1Q9ULR0 285 aaKnown RBP16.73■□□□□ 0.27
DDX3X-201ENST00000399959 MNS1Q8NEH6 495 aa16.73■□□□□ 0.27
DDX3X-201ENST00000399959 H3BQV1 296 aa16.72■□□□□ 0.27
DDX3X-201ENST00000399959 IFFO2Q5TF58 517 aa16.72■□□□□ 0.27
DDX3X-201ENST00000399959 CREBRFQ8IUR6 639 aa16.72■□□□□ 0.27
DDX3X-201ENST00000399959 BCL2L13Q9BXK5 485 aa16.72■□□□□ 0.27
DDX3X-201ENST00000399959 UQCRHLA0A096LP55 91 aa16.71■□□□□ 0.27
DDX3X-201ENST00000399959 ESPNB1AK53 854 aa16.71■□□□□ 0.27
DDX3X-201ENST00000399959 UQCRHP07919 91 aa16.71■□□□□ 0.27
DDX3X-201ENST00000399959 REC8O95072 547 aa16.71■□□□□ 0.27
DDX3X-201ENST00000399959 GRPEL1Q9HAV7 217 aa16.7■□□□□ 0.26
DDX3X-201ENST00000399959 ACBD3Q9H3P7 528 aa16.7■□□□□ 0.26
DDX3X-201ENST00000399959 PATL2C9JE40 543 aaKnown RBP16.7■□□□□ 0.26
DDX3X-201ENST00000399959 BACH2Q9BYV9 841 aa16.7■□□□□ 0.26
DDX3X-201ENST00000399959 RNF214Q8ND24 703 aa16.69■□□□□ 0.26
DDX3X-201ENST00000399959 TPM1P09493 284 aa16.68■□□□□ 0.26
DDX3X-201ENST00000399959 HSP90B2PQ58FF3 399 aa16.68■□□□□ 0.26
DDX3X-201ENST00000399959 TAF3Q5VWG9 929 aa16.68■□□□□ 0.26
DDX3X-201ENST00000399959 STK31Q9BXU1 1019 aa16.68■□□□□ 0.26
DDX3X-201ENST00000399959 CAVIN1Q6NZI2 390 aaKnown RBP16.68■□□□□ 0.26
DDX3X-201ENST00000399959 TSR1Q2NL82 804 aaKnown RBP16.67■□□□□ 0.26
DDX3X-201ENST00000399959 RILPL2Q969X0 211 aa16.67■□□□□ 0.26
DDX3X-201ENST00000399959 RRP7AQ9Y3A4 280 aaKnown RBP16.67■□□□□ 0.26
DDX3X-201ENST00000399959 EIF3AQ14152 1382 aaKnown RBP16.67■□□□□ 0.26
DDX3X-201ENST00000399959 FAM184AQ8NB25 1140 aa16.66■□□□□ 0.26
DDX3X-201ENST00000399959 DDX19BQ9UMR2 479 aa16.66■□□□□ 0.26
DDX3X-201ENST00000399959 HDGFL2Q7Z4V5 671 aaPredicted RBP16.66■□□□□ 0.26
DDX3X-201ENST00000399959 CCDC88BA6NC98 1476 aa16.66■□□□□ 0.26
DDX3X-201ENST00000399959 CLSTN1O94985 981 aa16.66■□□□□ 0.26
DDX3X-201ENST00000399959 SLC4A10Q6U841 1118 aa16.66■□□□□ 0.26
DDX3X-201ENST00000399959 CARMIL1Q5VZK9 1371 aa16.66■□□□□ 0.26
DDX3X-201ENST00000399959 TPD52L1Q16890 204 aaPredicted RBP16.65■□□□□ 0.26
DDX3X-201ENST00000399959 BCL11BQ9C0K0 894 aaPredicted RBP16.65■□□□□ 0.26
DDX3X-201ENST00000399959 CHMP3Q9Y3E7 222 aa16.65■□□□□ 0.26
DDX3X-201ENST00000399959 SASS6Q6UVJ0 657 aa16.65■□□□□ 0.26
DDX3X-201ENST00000399959 ZMYND15Q9H091 742 aa16.65■□□□□ 0.26
DDX3X-201ENST00000399959 PANK3Q9H999 370 aa16.64■□□□□ 0.25
DDX3X-201ENST00000399959 BICD2Q8TD16 824 aa16.64■□□□□ 0.25
DDX3X-201ENST00000399959 NUP155O75694 1391 aa16.63■□□□□ 0.25
DDX3X-201ENST00000399959 ST20-MTHFSA0A0A6YYL1 179 aa16.63■□□□□ 0.25
DDX3X-201ENST00000399959 AK7Q96M32 723 aa16.63■□□□□ 0.25
DDX3X-201ENST00000399959 MBD3O95983 291 aa16.63■□□□□ 0.25
DDX3X-201ENST00000399959 TSPY26PQ9H489 355 aa16.63■□□□□ 0.25
DDX3X-201ENST00000399959 CNTLNQ9NXG0 1405 aa16.63■□□□□ 0.25
DDX3X-201ENST00000399959 SAFB2Q14151 953 aaKnown RBP eCLIP16.63■□□□□ 0.25
DDX3X-201ENST00000399959 ABCC8Q09428 1581 aa16.63■□□□□ 0.25
DDX3X-201ENST00000399959 KANK1Q14678 1352 aa16.63■□□□□ 0.25
DDX3X-201ENST00000399959 RDXP35241 583 aaKnown RBP16.63■□□□□ 0.25
DDX3X-201ENST00000399959 AAMPQ13685 434 aa16.62■□□□□ 0.25
DDX3X-201ENST00000399959 PES1O00541 588 aaKnown RBP16.62■□□□□ 0.25
DDX3X-201ENST00000399959 RASSF8Q8NHQ8 419 aa16.62■□□□□ 0.25
DDX3X-201ENST00000399959 H0YHG0 523 aa16.62■□□□□ 0.25
DDX3X-201ENST00000399959 HDAC5Q9UQL6 1122 aa16.61■□□□□ 0.25
DDX3X-201ENST00000399959 LEKR1Q6ZMV7 388 aa16.61■□□□□ 0.25
DDX3X-201ENST00000399959 DZIP1LQ8IYY4 767 aaKnown RBP16.61■□□□□ 0.25
DDX3X-201ENST00000399959 PDCL3Q9H2J4 239 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms