RNA–Protein interactions for RNA: ENST00000399949.6

SPATA13-204, Transcript of spermatogenesis associated 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPATA13, Length 3,026 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-204ENST00000399949 HNRNPMP52272 730 aaKnown RBP eCLIP12.4□□□□□ -0.42
SPATA13-204ENST00000399949 L1TD1Q5T7N2 865 aaKnown RBP12.4□□□□□ -0.42
SPATA13-204ENST00000399949 NUP153P49790 1475 aaKnown RBP12.4□□□□□ -0.42
SPATA13-204ENST00000399949 PKD2Q13563 968 aa12.4□□□□□ -0.43
SPATA13-204ENST00000399949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.4□□□□□ -0.43
SPATA13-204ENST00000399949 SLKQ9H2G2 1235 aaPredicted RBP12.4□□□□□ -0.43
SPATA13-204ENST00000399949 DENND4BO75064 1496 aaPredicted RBP12.39□□□□□ -0.43
SPATA13-204ENST00000399949 DISP1Q96F81 1524 aa12.39□□□□□ -0.43
SPATA13-204ENST00000399949 XRCC6P12956 609 aaKnown RBP eCLIP12.39□□□□□ -0.43
SPATA13-204ENST00000399949 ZHX1Q9UKY1 873 aaPredicted RBP12.39□□□□□ -0.43
SPATA13-204ENST00000399949 GRIN2AQ12879 1464 aa12.39□□□□□ -0.43
SPATA13-204ENST00000399949 ABCC5O15440 1437 aa12.38□□□□□ -0.43
SPATA13-204ENST00000399949 DAPK1P53355 1430 aa12.38□□□□□ -0.43
SPATA13-204ENST00000399949 PLEKHD1A6NEE1 506 aa12.38□□□□□ -0.43
SPATA13-204ENST00000399949 RRP1P56182 461 aaKnown RBP12.38□□□□□ -0.43
SPATA13-204ENST00000399949 CALD1Q05682 793 aaKnown RBP12.37□□□□□ -0.43
SPATA13-204ENST00000399949 CNTLNQ9NXG0 1405 aa12.37□□□□□ -0.43
SPATA13-204ENST00000399949 PDCL3Q9H2J4 239 aa12.37□□□□□ -0.43
SPATA13-204ENST00000399949 KIAA0586Q9BVV6 1533 aa12.37□□□□□ -0.43
SPATA13-204ENST00000399949 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
SPATA13-204ENST00000399949 PLIN1O60240 522 aa12.36□□□□□ -0.43
SPATA13-204ENST00000399949 RGL3Q3MIN7 710 aa12.35□□□□□ -0.43
SPATA13-204ENST00000399949 CHMP4BQ9H444 224 aaKnown RBP12.34□□□□□ -0.43
SPATA13-204ENST00000399949 PRDM10Q9NQV6 1147 aa12.34□□□□□ -0.43
SPATA13-204ENST00000399949 KIAA0556O60303 1618 aa12.34□□□□□ -0.43
SPATA13-204ENST00000399949 ARHGEF11O15085 1522 aa12.34□□□□□ -0.43
SPATA13-204ENST00000399949 GOLGA6L3A6NEY3 463 aa12.34□□□□□ -0.43
SPATA13-204ENST00000399949 ERBB4Q15303 1308 aa12.33□□□□□ -0.44
SPATA13-204ENST00000399949 TCOF1Q13428 1488 aaKnown RBP12.32□□□□□ -0.44
SPATA13-204ENST00000399949 MIA2Q96PC5 1412 aa12.32□□□□□ -0.44
SPATA13-204ENST00000399949 KDM5BQ9UGL1 1544 aa12.32□□□□□ -0.44
SPATA13-204ENST00000399949 TSPY4P0CV99 314 aa12.31□□□□□ -0.44
SPATA13-204ENST00000399949 TSPY10P0CW01 314 aa12.31□□□□□ -0.44
SPATA13-204ENST00000399949 RCAN3Q9UKA8 241 aa12.31□□□□□ -0.44
SPATA13-204ENST00000399949 ANKRD30BQ9BXX2 1392 aa12.31□□□□□ -0.44
SPATA13-204ENST00000399949 ESPNB1AK53 854 aa12.31□□□□□ -0.44
SPATA13-204ENST00000399949 NUP155O75694 1391 aa12.31□□□□□ -0.44
SPATA13-204ENST00000399949 FAM13BQ9NYF5 915 aa12.3□□□□□ -0.44
SPATA13-204ENST00000399949 KIF7Q2M1P5 1343 aa12.3□□□□□ -0.44
SPATA13-204ENST00000399949 CAMSAP2Q08AD1 1489 aa12.3□□□□□ -0.44
SPATA13-204ENST00000399949 CEP170Q5SW79 1584 aa12.3□□□□□ -0.44
SPATA13-204ENST00000399949 KIF14Q15058 1648 aa12.3□□□□□ -0.44
SPATA13-204ENST00000399949 RAPGEF6Q8TEU7 1601 aa12.3□□□□□ -0.44
SPATA13-204ENST00000399949 KIAA1211Q6ZU35 1233 aa12.29□□□□□ -0.44
SPATA13-204ENST00000399949 TROQ12816 1431 aaPredicted RBP12.29□□□□□ -0.44
SPATA13-204ENST00000399949 CARMIL2Q6F5E8 1435 aa12.29□□□□□ -0.44
SPATA13-204ENST00000399949 NAP1L2Q9ULW6 460 aaPredicted RBP12.29□□□□□ -0.44
SPATA13-204ENST00000399949 CYB5RLQ6IPT4 315 aa12.28□□□□□ -0.44
SPATA13-204ENST00000399949 SPRYD3Q8NCJ5 442 aa12.28□□□□□ -0.44
SPATA13-204ENST00000399949 CRBNQ96SW2 442 aa12.28□□□□□ -0.44
SPATA13-204ENST00000399949 CHD1O14646 1710 aa12.28□□□□□ -0.44
SPATA13-204ENST00000399949 CCDC7Q96M83 1385 aa12.28□□□□□ -0.44
SPATA13-204ENST00000399949 GPATCH8Q9UKJ3 1502 aaKnown RBP12.27□□□□□ -0.45
SPATA13-204ENST00000399949 TPM2P07951 284 aa12.27□□□□□ -0.45
SPATA13-204ENST00000399949 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.45
SPATA13-204ENST00000399949 CARD11Q9BXL7 1154 aa12.27□□□□□ -0.45
SPATA13-204ENST00000399949 SYNJ2O15056 1496 aa12.26□□□□□ -0.45
SPATA13-204ENST00000399949 FAM161AQ3B820 660 aa12.26□□□□□ -0.45
SPATA13-204ENST00000399949 TRIM44Q96DX7 344 aaPredicted RBP12.26□□□□□ -0.45
SPATA13-204ENST00000399949 GTF2E1P29083 439 aaPredicted RBP12.26□□□□□ -0.45
SPATA13-204ENST00000399949 C8orf34Q49A92 452 aa12.26□□□□□ -0.45
SPATA13-204ENST00000399949 MYH16Q9H6N6 1097 aa12.26□□□□□ -0.45
SPATA13-204ENST00000399949 NCOA1Q15788 1441 aa12.25□□□□□ -0.45
SPATA13-204ENST00000399949 ANKRD30AQ9BXX3 1397 aa12.25□□□□□ -0.45
SPATA13-204ENST00000399949 CENPJQ9HC77 1338 aaPredicted RBP12.25□□□□□ -0.45
SPATA13-204ENST00000399949 TMC1Q8TDI8 760 aa12.25□□□□□ -0.45
SPATA13-204ENST00000399949 PAXIP1Q6ZW49 1069 aaPredicted RBP12.24□□□□□ -0.45
SPATA13-204ENST00000399949 ANKRD50Q9ULJ7 1429 aa12.24□□□□□ -0.45
SPATA13-204ENST00000399949 GCC2Q8IWJ2 1684 aa12.24□□□□□ -0.45
SPATA13-204ENST00000399949 PTPRGP23470 1445 aa12.23□□□□□ -0.45
SPATA13-204ENST00000399949 CANXP27824 592 aaKnown RBP12.23□□□□□ -0.45
SPATA13-204ENST00000399949 RPRD2Q5VT52 1461 aaKnown RBP12.23□□□□□ -0.45
SPATA13-204ENST00000399949 USP47Q96K76 1375 aa12.23□□□□□ -0.45
SPATA13-204ENST00000399949 ST20-MTHFSA0A0A6YYL1 179 aa12.22□□□□□ -0.45
SPATA13-204ENST00000399949 PZPP20742 1482 aa12.22□□□□□ -0.45
SPATA13-204ENST00000399949 ROCK1Q13464 1354 aa12.22□□□□□ -0.45
SPATA13-204ENST00000399949 MAGI1Q96QZ7 1491 aaPredicted RBP12.22□□□□□ -0.45
SPATA13-204ENST00000399949 CDCA7LQ96GN5 454 aa12.21□□□□□ -0.45
SPATA13-204ENST00000399949 ATP10BO94823 1461 aa12.21□□□□□ -0.45
SPATA13-204ENST00000399949 PLCD3Q8N3E9 789 aa12.21□□□□□ -0.45
SPATA13-204ENST00000399949 DNMT1P26358 1616 aaKnown RBP12.21□□□□□ -0.45
SPATA13-204ENST00000399949 VGLL3A8MV65 326 aa12.21□□□□□ -0.46
SPATA13-204ENST00000399949 C20orf194Q5TEA3 1177 aa12.21□□□□□ -0.46
SPATA13-204ENST00000399949 STAC3Q96MF2 364 aa12.21□□□□□ -0.46
SPATA13-204ENST00000399949 SENP3Q9H4L4 574 aaPredicted RBP12.21□□□□□ -0.46
SPATA13-204ENST00000399949 KIF15Q9NS87 1388 aa12.21□□□□□ -0.46
SPATA13-204ENST00000399949 FSD2A1L4K1 749 aa12.2□□□□□ -0.46
SPATA13-204ENST00000399949 RIPK4P57078 832 aa12.2□□□□□ -0.46
SPATA13-204ENST00000399949 C9orf84Q5VXU9 1444 aa12.2□□□□□ -0.46
SPATA13-204ENST00000399949 TEX14Q8IWB6 1497 aa12.2□□□□□ -0.46
SPATA13-204ENST00000399949 PNISRQ8TF01 805 aaKnown RBP12.19□□□□□ -0.46
SPATA13-204ENST00000399949 RIMBP3CA6NJZ7 1639 aa12.19□□□□□ -0.46
SPATA13-204ENST00000399949 RIMBP3BA6NNM3 1639 aa12.19□□□□□ -0.46
SPATA13-204ENST00000399949 RIMBP3Q9UFD9 1639 aa12.19□□□□□ -0.46
SPATA13-204ENST00000399949 KIAA1107Q9UPP5 1409 aa12.18□□□□□ -0.46
SPATA13-204ENST00000399949 NBPF1Q3BBV0 1214 aa12.18□□□□□ -0.46
SPATA13-204ENST00000399949 GRPEL1Q9HAV7 217 aa12.18□□□□□ -0.46
SPATA13-204ENST00000399949 MRE11P49959 708 aa12.17□□□□□ -0.46
SPATA13-204ENST00000399949 KTN1Q86UP2 1357 aaKnown RBP12.17□□□□□ -0.46
SPATA13-204ENST00000399949 R3HCC1Q9Y3T6 440 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms