RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 WASHC2CQ9Y4E1 1318 aa13.79□□□□□ -0.2
CACNA1C-215ENST00000399637 GOLGA6L1Q8N7Z2 621 aa13.79□□□□□ -0.2
CACNA1C-215ENST00000399637 RBM33Q96EV2 1170 aaKnown RBP13.79□□□□□ -0.2
CACNA1C-215ENST00000399637 VPS37DQ86XT2 251 aa13.78□□□□□ -0.2
CACNA1C-215ENST00000399637 ITPRIPQ8IWB1 547 aa13.78□□□□□ -0.2
CACNA1C-215ENST00000399637 SIN3AQ96ST3 1273 aa13.78□□□□□ -0.2
CACNA1C-215ENST00000399637 KTN1Q86UP2 1357 aaKnown RBP13.78□□□□□ -0.2
CACNA1C-215ENST00000399637 CSPP1Q1MSJ5 1256 aa13.77□□□□□ -0.21
CACNA1C-215ENST00000399637 CHMP4AQ9BY43 222 aa13.77□□□□□ -0.21
CACNA1C-215ENST00000399637 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.76□□□□□ -0.21
CACNA1C-215ENST00000399637 KIF3BO15066 747 aa13.76□□□□□ -0.21
CACNA1C-215ENST00000399637 RWDD1Q9H446 243 aaPredicted RBP13.76□□□□□ -0.21
CACNA1C-215ENST00000399637 DHX16O60231 1041 aaKnown RBP13.75□□□□□ -0.21
CACNA1C-215ENST00000399637 USP35Q9P2H5 1018 aa13.75□□□□□ -0.21
CACNA1C-215ENST00000399637 SLC4A10Q6U841 1118 aa13.74□□□□□ -0.21
CACNA1C-215ENST00000399637 PSME1Q06323 249 aa13.74□□□□□ -0.21
CACNA1C-215ENST00000399637 TTC5Q8N0Z6 440 aa13.74□□□□□ -0.21
CACNA1C-215ENST00000399637 CARMIL2Q6F5E8 1435 aa13.74□□□□□ -0.21
CACNA1C-215ENST00000399637 TRIM6-TRIM34B2RNG4 842 aa13.73□□□□□ -0.21
CACNA1C-215ENST00000399637 HDAC5Q9UQL6 1122 aa13.73□□□□□ -0.21
CACNA1C-215ENST00000399637 EFCAB2Q5VUJ9 269 aa13.73□□□□□ -0.21
CACNA1C-215ENST00000399637 FANCIQ9NVI1 1328 aa13.72□□□□□ -0.21
CACNA1C-215ENST00000399637 CCDC43Q96MW1 224 aaKnown RBP13.72□□□□□ -0.21
CACNA1C-215ENST00000399637 VSIG10Q8N0Z9 540 aa13.71□□□□□ -0.21
CACNA1C-215ENST00000399637 PMFBP1Q8TBY8 1022 aa13.71□□□□□ -0.21
CACNA1C-215ENST00000399637 U2AF1L5P0DN76 240 aaPredicted RBP13.71□□□□□ -0.21
CACNA1C-215ENST00000399637 U2AF1Q01081 240 aaKnown RBP eCLIP13.71□□□□□ -0.21
CACNA1C-215ENST00000399637 WASHC2AQ641Q2 1341 aa13.7□□□□□ -0.22
CACNA1C-215ENST00000399637 FHAD1B1AJZ9 1412 aa13.7□□□□□ -0.22
CACNA1C-215ENST00000399637 EIF3AQ14152 1382 aaKnown RBP13.7□□□□□ -0.22
CACNA1C-215ENST00000399637 TPM3P06753 285 aa13.7□□□□□ -0.22
CACNA1C-215ENST00000399637 PAF1Q8N7H5 531 aa13.7□□□□□ -0.22
CACNA1C-215ENST00000399637 HMMRO75330 724 aa13.69□□□□□ -0.22
CACNA1C-215ENST00000399637 SLC4A3P48751 1232 aa13.69□□□□□ -0.22
CACNA1C-215ENST00000399637 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
CACNA1C-215ENST00000399637 DEKP35659 375 aaKnown RBP13.69□□□□□ -0.22
CACNA1C-215ENST00000399637 FAM69CQ0P6D2 419 aa13.69□□□□□ -0.22
CACNA1C-215ENST00000399637 GZF1Q9H116 711 aaPredicted RBP13.69□□□□□ -0.22
CACNA1C-215ENST00000399637 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.69□□□□□ -0.221e-7■■■■■ 115.4
CACNA1C-215ENST00000399637 ROCK2O75116 1388 aaKnown RBP13.69□□□□□ -0.22
CACNA1C-215ENST00000399637 PES1O00541 588 aaKnown RBP13.67□□□□□ -0.22
CACNA1C-215ENST00000399637 TMEM132AQ24JP5 1023 aa13.67□□□□□ -0.22
CACNA1C-215ENST00000399637 DHX37Q8IY37 1157 aaKnown RBP13.67□□□□□ -0.22
CACNA1C-215ENST00000399637 MFAP1P55081 439 aaKnown RBP13.67□□□□□ -0.22
CACNA1C-215ENST00000399637 AK7Q96M32 723 aa13.67□□□□□ -0.22
CACNA1C-215ENST00000399637 AKAP17AQ02040 695 aaKnown RBP13.67□□□□□ -0.22
CACNA1C-215ENST00000399637 TOP2AP11388 1531 aaKnown RBP13.66□□□□□ -0.22
CACNA1C-215ENST00000399637 TERF2IPQ9NYB0 399 aa13.66□□□□□ -0.22
CACNA1C-215ENST00000399637 HSPA5P11021 654 aaKnown RBP13.66□□□□□ -0.22
CACNA1C-215ENST00000399637 WWC2Q6AWC2 1192 aa13.66□□□□□ -0.22
CACNA1C-215ENST00000399637 R3HCC1Q9Y3T6 440 aaKnown RBP13.65□□□□□ -0.22
CACNA1C-215ENST00000399637 PHF14O94880 888 aa13.65□□□□□ -0.22
CACNA1C-215ENST00000399637 TPD52L1Q16890 204 aaPredicted RBP13.65□□□□□ -0.22
CACNA1C-215ENST00000399637 SOGA1O94964 1423 aa13.65□□□□□ -0.22
CACNA1C-215ENST00000399637 SMC4Q9NTJ3 1288 aa13.64□□□□□ -0.23
CACNA1C-215ENST00000399637 MROH2BQ7Z745 1585 aa13.64□□□□□ -0.23
CACNA1C-215ENST00000399637 TPM2P07951 284 aa13.64□□□□□ -0.23
CACNA1C-215ENST00000399637 PPM1FP49593 454 aaPredicted RBP13.64□□□□□ -0.23
CACNA1C-215ENST00000399637 RCAN3Q9UKA8 241 aa13.64□□□□□ -0.23
CACNA1C-215ENST00000399637 KIF16BQ96L93 1317 aa13.64□□□□□ -0.23
CACNA1C-215ENST00000399637 GOLGA6L3A6NEY3 463 aa13.64□□□□□ -0.23
CACNA1C-215ENST00000399637 IBSPP21815 317 aaPredicted RBP13.64□□□□□ -0.23
CACNA1C-215ENST00000399637 ARHGAP35Q9NRY4 1499 aa13.64□□□□□ -0.23
CACNA1C-215ENST00000399637 TCERG1O14776 1098 aaKnown RBP13.63□□□□□ -0.23
CACNA1C-215ENST00000399637 IKQ13123 557 aaPredicted RBP13.63□□□□□ -0.23
CACNA1C-215ENST00000399637 SLKQ9H2G2 1235 aaPredicted RBP13.63□□□□□ -0.23
CACNA1C-215ENST00000399637 KIF3AQ9Y496 699 aa13.63□□□□□ -0.23
CACNA1C-215ENST00000399637 RALBP1Q15311 655 aa13.63□□□□□ -0.23
CACNA1C-215ENST00000399637 NOL8Q76FK4 1167 aaKnown RBP13.63□□□□□ -0.23
CACNA1C-215ENST00000399637 SETD5Q9C0A6 1442 aa13.63□□□□□ -0.23
CACNA1C-215ENST00000399637 BCL11BQ9C0K0 894 aaPredicted RBP13.63□□□□□ -0.23
CACNA1C-215ENST00000399637 CECR2Q9BXF3 1484 aa13.63□□□□□ -0.23
CACNA1C-215ENST00000399637 SETQ01105 290 aaPredicted RBP13.63□□□□□ -0.23
CACNA1C-215ENST00000399637 FYB1O15117 783 aa13.62□□□□□ -0.23
CACNA1C-215ENST00000399637 LMOD3Q0VAK6 560 aa13.62□□□□□ -0.23
CACNA1C-215ENST00000399637 SF3A1Q15459 793 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-215ENST00000399637 WDR70Q9NW82 654 aa13.62□□□□□ -0.23
CACNA1C-215ENST00000399637 DHX57Q6P158 1386 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-215ENST00000399637 FAM177BA6PVY3 158 aa13.61□□□□□ -0.23
CACNA1C-215ENST00000399637 TEFQ10587 303 aa13.61□□□□□ -0.23
CACNA1C-215ENST00000399637 PKD2Q13563 968 aa13.61□□□□□ -0.23
CACNA1C-215ENST00000399637 TSR1Q2NL82 804 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-215ENST00000399637 STRN4Q9NRL3 753 aa13.61□□□□□ -0.23
CACNA1C-215ENST00000399637 CCDC88BA6NC98 1476 aa13.6□□□□□ -0.23
CACNA1C-215ENST00000399637 H3BQV1 296 aa13.6□□□□□ -0.23
CACNA1C-215ENST00000399637 IFFO2Q5TF58 517 aa13.6□□□□□ -0.23
CACNA1C-215ENST00000399637 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
CACNA1C-215ENST00000399637 FOXD4L1Q9NU39 408 aa13.59□□□□□ -0.23
CACNA1C-215ENST00000399637 ST18O60284 1047 aa13.59□□□□□ -0.23
CACNA1C-215ENST00000399637 SYNE3Q6ZMZ3 975 aa13.59□□□□□ -0.23
CACNA1C-215ENST00000399637 EIF2S2P20042 333 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-215ENST00000399637 PLCD4Q9BRC7 762 aa13.58□□□□□ -0.24
CACNA1C-215ENST00000399637 HNRNPMP52272 730 aaKnown RBP eCLIP13.58□□□□□ -0.24
CACNA1C-215ENST00000399637 CCDC27Q2M243 656 aa13.57□□□□□ -0.24
CACNA1C-215ENST00000399637 CCAR2Q8N163 923 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-215ENST00000399637 MTMR7Q9Y216 660 aa13.57□□□□□ -0.24
CACNA1C-215ENST00000399637 CHMP4CQ96CF2 233 aa13.57□□□□□ -0.24
CACNA1C-215ENST00000399637 RRP12Q5JTH9 1297 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-215ENST00000399637 CCDC70Q6NSX1 233 aa13.56□□□□□ -0.24
CACNA1C-215ENST00000399637 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms