RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 IPO9Q96P70 1041 aaKnown RBP14.36□□□□□ -0.11
HLCS-202ENST00000399120 IPO7O95373 1038 aaKnown RBP14.35□□□□□ -0.11
HLCS-202ENST00000399120 CNKSR2Q8WXI2 1034 aa14.35□□□□□ -0.11
HLCS-202ENST00000399120 EEA1Q15075 1411 aa14.35□□□□□ -0.11
HLCS-202ENST00000399120 ATP6V1DQ9Y5K8 247 aa14.34□□□□□ -0.11
HLCS-202ENST00000399120 HSPA5P11021 654 aaKnown RBP14.34□□□□□ -0.11
HLCS-202ENST00000399120 TEX35Q5T0J7 233 aa14.34□□□□□ -0.11
HLCS-202ENST00000399120 SYNE3Q6ZMZ3 975 aa14.34□□□□□ -0.11
HLCS-202ENST00000399120 ZNF592Q92610 1267 aa14.34□□□□□ -0.11
HLCS-202ENST00000399120 RALBP1Q15311 655 aa14.33□□□□□ -0.11
HLCS-202ENST00000399120 CCDC47Q96A33 483 aaKnown RBP14.33□□□□□ -0.12
HLCS-202ENST00000399120 RSPH6AQ9H0K4 717 aa14.33□□□□□ -0.12
HLCS-202ENST00000399120 CTDP1Q9Y5B0 961 aaPredicted RBP14.33□□□□□ -0.12
HLCS-202ENST00000399120 LMOD3Q0VAK6 560 aa14.32□□□□□ -0.12
HLCS-202ENST00000399120 ANKRD20A12PQ8NF67 263 aa14.32□□□□□ -0.12
HLCS-202ENST00000399120 DDX49Q9Y6V7 483 aaKnown RBP14.31□□□□□ -0.12
HLCS-202ENST00000399120 CLUAP1Q96AJ1 413 aa14.31□□□□□ -0.12
HLCS-202ENST00000399120 MCTP1Q6DN14 999 aa14.3□□□□□ -0.12
HLCS-202ENST00000399120 GGT6Q6P531 493 aa14.3□□□□□ -0.12
HLCS-202ENST00000399120 CDR1P51861 262 aa14.3□□□□□ -0.12
HLCS-202ENST00000399120 TRIM34Q9BYJ4 488 aa14.3□□□□□ -0.12
HLCS-202ENST00000399120 SKOR2Q2VWA4 1001 aaPredicted RBP14.3□□□□□ -0.12
HLCS-202ENST00000399120 RILPL2Q969X0 211 aa14.3□□□□□ -0.12
HLCS-202ENST00000399120 AMOTL1Q8IY63 956 aa14.3□□□□□ -0.12
HLCS-202ENST00000399120 TRIM29Q14134 588 aa14.29□□□□□ -0.12
HLCS-202ENST00000399120 CENPJQ9HC77 1338 aaPredicted RBP14.29□□□□□ -0.12
HLCS-202ENST00000399120 ROCK2O75116 1388 aaKnown RBP14.29□□□□□ -0.12
HLCS-202ENST00000399120 VSIG10Q8N0Z9 540 aa14.29□□□□□ -0.12
HLCS-202ENST00000399120 TIMELESSQ9UNS1 1208 aa14.29□□□□□ -0.12
HLCS-202ENST00000399120 CPLX2Q6PUV4 134 aaKnown RBP14.29□□□□□ -0.12
HLCS-202ENST00000399120 NOL10Q9BSC4 688 aaKnown RBP14.28□□□□□ -0.12
HLCS-202ENST00000399120 RUFY1Q96T51 708 aa14.28□□□□□ -0.12
HLCS-202ENST00000399120 RAD21O60216 631 aa14.28□□□□□ -0.12
HLCS-202ENST00000399120 FOXD4L6Q3SYB3 417 aaPredicted RBP14.28□□□□□ -0.12
HLCS-202ENST00000399120 FOXD4L3Q6VB84 417 aaPredicted RBP14.28□□□□□ -0.12
HLCS-202ENST00000399120 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.28□□□□□ -0.124e-8■■■■■ 170.1
HLCS-202ENST00000399120 AK7Q96M32 723 aa14.27□□□□□ -0.12
HLCS-202ENST00000399120 HOMER1Q86YM7 354 aa14.27□□□□□ -0.13
HLCS-202ENST00000399120 LRRFIP1Q32MZ4 808 aaKnown RBP14.26□□□□□ -0.13
HLCS-202ENST00000399120 TERF2IPQ9NYB0 399 aa14.26□□□□□ -0.13
HLCS-202ENST00000399120 EIF3AQ14152 1382 aaKnown RBP14.26□□□□□ -0.13
HLCS-202ENST00000399120 AMPHP49418 695 aa14.26□□□□□ -0.13
HLCS-202ENST00000399120 HOOK1Q9UJC3 728 aaKnown RBP14.26□□□□□ -0.13
HLCS-202ENST00000399120 KIF27Q86VH2 1401 aa14.26□□□□□ -0.13
HLCS-202ENST00000399120 CCDC180Q9P1Z9 1646 aa14.25□□□□□ -0.13
HLCS-202ENST00000399120 CCDC146Q8IYE0 955 aa14.24□□□□□ -0.13
HLCS-202ENST00000399120 NOM1Q5C9Z4 860 aaKnown RBP14.24□□□□□ -0.13
HLCS-202ENST00000399120 ACBD3Q9H3P7 528 aa14.24□□□□□ -0.13
HLCS-202ENST00000399120 NGDNQ8NEJ9 315 aaKnown RBP14.24□□□□□ -0.13
HLCS-202ENST00000399120 PKD2Q13563 968 aa14.23□□□□□ -0.13
HLCS-202ENST00000399120 ODF2Q5BJF6 829 aa14.23□□□□□ -0.13
HLCS-202ENST00000399120 CT47A1Q5JQC4 288 aaPredicted RBP14.23□□□□□ -0.13
HLCS-202ENST00000399120 LTV1Q96GA3 475 aaPredicted RBP14.23□□□□□ -0.13
HLCS-202ENST00000399120 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.23□□□□□ -0.13
HLCS-202ENST00000399120 CCDC43Q96MW1 224 aaKnown RBP14.23□□□□□ -0.13
HLCS-202ENST00000399120 NAP1L1P55209 391 aaKnown RBP14.22□□□□□ -0.13
HLCS-202ENST00000399120 DIAPH3Q9NSV4 1193 aa14.22□□□□□ -0.13
HLCS-202ENST00000399120 DHX16O60231 1041 aaKnown RBP14.22□□□□□ -0.13
HLCS-202ENST00000399120 CEP164Q9UPV0 1460 aa14.22□□□□□ -0.13
HLCS-202ENST00000399120 ANKRD45Q5TZF3 282 aa14.21□□□□□ -0.13
HLCS-202ENST00000399120 RUFY2Q8WXA3 655 aa14.21□□□□□ -0.13
HLCS-202ENST00000399120 CPLX1O14810 134 aa14.2□□□□□ -0.14
HLCS-202ENST00000399120 MAP7D2Q96T17 732 aa14.2□□□□□ -0.14
HLCS-202ENST00000399120 ARGLU1Q9NWB6 273 aaPredicted RBP14.2□□□□□ -0.14
HLCS-202ENST00000399120 BICD2Q8TD16 824 aa14.2□□□□□ -0.14
HLCS-202ENST00000399120 FHAD1B1AJZ9 1412 aa14.2□□□□□ -0.14
HLCS-202ENST00000399120 CWC22Q9HCG8 908 aaKnown RBP14.2□□□□□ -0.14
HLCS-202ENST00000399120 CCDC191Q8NCU4 936 aa14.2□□□□□ -0.14
HLCS-202ENST00000399120 TNIKQ9UKE5 1360 aa14.19□□□□□ -0.14
HLCS-202ENST00000399120 PDE3BQ13370 1112 aa14.19□□□□□ -0.14
HLCS-202ENST00000399120 MNS1Q8NEH6 495 aa14.19□□□□□ -0.14
HLCS-202ENST00000399120 ANO2Q9NQ90 1003 aa14.19□□□□□ -0.14
HLCS-202ENST00000399120 ZKSCAN1P17029 563 aaPredicted RBP14.18□□□□□ -0.14
HLCS-202ENST00000399120 MSH5O43196 834 aa14.18□□□□□ -0.14
HLCS-202ENST00000399120 APPP05067 770 aa14.18□□□□□ -0.14
HLCS-202ENST00000399120 DCTN1Q14203 1278 aa14.18□□□□□ -0.14
HLCS-202ENST00000399120 GSE1Q14687 1217 aa14.18□□□□□ -0.14
HLCS-202ENST00000399120 HSP90B2PQ58FF3 399 aa14.18□□□□□ -0.14
HLCS-202ENST00000399120 FAM13BQ9NYF5 915 aa14.18□□□□□ -0.14
HLCS-202ENST00000399120 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.17□□□□□ -0.14
HLCS-202ENST00000399120 EID1Q9Y6B2 187 aa14.17□□□□□ -0.14
HLCS-202ENST00000399120 EIF4G1Q04637 1599 aaKnown RBP14.17□□□□□ -0.14
HLCS-202ENST00000399120 C1orf141Q5JVX7 400 aa14.17□□□□□ -0.14
HLCS-202ENST00000399120 CCDC173Q0VFZ6 552 aa14.17□□□□□ -0.14
HLCS-202ENST00000399120 HSP90AB2PQ58FF8 381 aa14.17□□□□□ -0.14
HLCS-202ENST00000399120 SETD5Q9C0A6 1442 aa14.17□□□□□ -0.14
HLCS-202ENST00000399120 TRDNQ13061 729 aa14.17□□□□□ -0.14
HLCS-202ENST00000399120 FAM161AQ3B820 660 aa14.16□□□□□ -0.14
HLCS-202ENST00000399120 SASS6Q6UVJ0 657 aa14.16□□□□□ -0.14
HLCS-202ENST00000399120 CENPQQ7L2Z9 268 aaPredicted RBP14.16□□□□□ -0.14
HLCS-202ENST00000399120 R3HCC1Q9Y3T6 440 aaKnown RBP14.16□□□□□ -0.14
HLCS-202ENST00000399120 WRNQ14191 1432 aaPredicted RBP eCLIP14.16□□□□□ -0.14
HLCS-202ENST00000399120 ZFYVE27Q5T4F4 411 aa14.16□□□□□ -0.14
HLCS-202ENST00000399120 NFXL1Q6ZNB6 911 aa14.16□□□□□ -0.14
HLCS-202ENST00000399120 FOXD1Q16676 465 aa14.16□□□□□ -0.14
HLCS-202ENST00000399120 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
HLCS-202ENST00000399120 ERICH2A1L162 156 aa14.15□□□□□ -0.14
HLCS-202ENST00000399120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.15□□□□□ -0.14
HLCS-202ENST00000399120 RDXP35241 583 aaKnown RBP14.15□□□□□ -0.14
HLCS-202ENST00000399120 NEXNQ0ZGT2 675 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms