RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 ARHGAP35Q9NRY4 1499 aa11.82□□□□□ -0.52
CDH23-203ENST00000398788 KIF3BO15066 747 aa11.82□□□□□ -0.52
CDH23-203ENST00000398788 ABCA10Q8WWZ4 1543 aa11.82□□□□□ -0.52
CDH23-203ENST00000398788 RAB3GAP2Q9H2M9 1393 aa11.81□□□□□ -0.52
CDH23-203ENST00000398788 TMF1P82094 1093 aa11.81□□□□□ -0.52
CDH23-203ENST00000398788 KIAA1211Q6ZU35 1233 aa11.81□□□□□ -0.52
CDH23-203ENST00000398788 PTMAP06454 111 aaKnown RBP11.81□□□□□ -0.52
CDH23-203ENST00000398788 IGF1RP08069 1367 aa11.81□□□□□ -0.52
CDH23-203ENST00000398788 RSPH4AQ5TD94 716 aa11.8□□□□□ -0.52
CDH23-203ENST00000398788 IFT140Q96RY7 1462 aa11.8□□□□□ -0.52
CDH23-203ENST00000398788 TARBP1Q13395 1621 aaKnown RBP11.8□□□□□ -0.52
CDH23-203ENST00000398788 PLIN1O60240 522 aa11.8□□□□□ -0.52
CDH23-203ENST00000398788 R3HCC1Q9Y3T6 440 aaKnown RBP11.8□□□□□ -0.52
CDH23-203ENST00000398788 ZNF608Q9ULD9 1512 aaPredicted RBP11.8□□□□□ -0.52
CDH23-203ENST00000398788 SPAG9O60271 1321 aaKnown RBP11.8□□□□□ -0.52
CDH23-203ENST00000398788 CHMP4BQ9H444 224 aaKnown RBP11.79□□□□□ -0.52
CDH23-203ENST00000398788 ESPNB1AK53 854 aa11.79□□□□□ -0.52
CDH23-203ENST00000398788 AQRO60306 1485 aaKnown RBP eCLIP11.79□□□□□ -0.52
CDH23-203ENST00000398788 GAPVD1Q14C86 1478 aa11.79□□□□□ -0.52
CDH23-203ENST00000398788 MPHOSPH9Q99550 1183 aa11.79□□□□□ -0.52
CDH23-203ENST00000398788 NUTM2DQ5VT03 806 aaPredicted RBP11.78□□□□□ -0.52
CDH23-203ENST00000398788 PLCD3Q8N3E9 789 aa11.78□□□□□ -0.52
CDH23-203ENST00000398788 SETD5Q9C0A6 1442 aa11.78□□□□□ -0.52
CDH23-203ENST00000398788 APBB1O00213 710 aa11.77□□□□□ -0.52
CDH23-203ENST00000398788 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.52
CDH23-203ENST00000398788 MORC1Q86VD1 984 aa11.77□□□□□ -0.52
CDH23-203ENST00000398788 L3MBTL2Q969R5 705 aa11.77□□□□□ -0.52
CDH23-203ENST00000398788 NUP155O75694 1391 aa11.77□□□□□ -0.52
CDH23-203ENST00000398788 ANKRD30AQ9BXX3 1397 aa11.77□□□□□ -0.53
CDH23-203ENST00000398788 PRKRIP1Q9H875 184 aaPredicted RBP11.77□□□□□ -0.53
CDH23-203ENST00000398788 WDR97A6NE52 1622 aa11.76□□□□□ -0.53
CDH23-203ENST00000398788 RRP1P56182 461 aaKnown RBP11.76□□□□□ -0.53
CDH23-203ENST00000398788 FAM161AQ3B820 660 aa11.76□□□□□ -0.53
CDH23-203ENST00000398788 CLCN1P35523 988 aa11.75□□□□□ -0.53
CDH23-203ENST00000398788 NAP1L2Q9ULW6 460 aaPredicted RBP11.75□□□□□ -0.53
CDH23-203ENST00000398788 PLCB2Q00722 1185 aa11.74□□□□□ -0.53
CDH23-203ENST00000398788 PANK2Q9BZ23 570 aa11.74□□□□□ -0.53
CDH23-203ENST00000398788 MAP7D2Q96T17 732 aa11.74□□□□□ -0.53
CDH23-203ENST00000398788 GOLGA6L22H0YM25 854 aa11.73□□□□□ -0.53
CDH23-203ENST00000398788 MRE11P49959 708 aa11.73□□□□□ -0.53
CDH23-203ENST00000398788 ABCA5Q8WWZ7 1642 aa11.72□□□□□ -0.53
CDH23-203ENST00000398788 NUTM2FA1L443 756 aa11.72□□□□□ -0.53
CDH23-203ENST00000398788 U2AF1L5P0DN76 240 aaPredicted RBP11.72□□□□□ -0.53
CDH23-203ENST00000398788 U2AF1Q01081 240 aaKnown RBP eCLIP11.72□□□□□ -0.53
CDH23-203ENST00000398788 AEBP2Q6ZN18 517 aaPredicted RBP11.72□□□□□ -0.53
CDH23-203ENST00000398788 CALD1Q05682 793 aaKnown RBP11.72□□□□□ -0.53
CDH23-203ENST00000398788 CCDC18Q5T9S5 1454 aa11.72□□□□□ -0.53
CDH23-203ENST00000398788 OS9Q13438 667 aaPredicted RBP11.72□□□□□ -0.53
CDH23-203ENST00000398788 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.72□□□□□ -0.53
CDH23-203ENST00000398788 EIF4G3O43432 1585 aaKnown RBP11.71□□□□□ -0.53
CDH23-203ENST00000398788 CRBNQ96SW2 442 aa11.71□□□□□ -0.53
CDH23-203ENST00000398788 TULP1O00294 542 aaPredicted RBP11.71□□□□□ -0.54
CDH23-203ENST00000398788 CLUAP1Q96AJ1 413 aa11.7□□□□□ -0.54
CDH23-203ENST00000398788 ZNF771Q7L3S4 317 aaPredicted RBP11.7□□□□□ -0.54
CDH23-203ENST00000398788 VGLL3A8MV65 326 aa11.69□□□□□ -0.54
CDH23-203ENST00000398788 FAM69CQ0P6D2 419 aa11.69□□□□□ -0.54
CDH23-203ENST00000398788 XRCC6P12956 609 aaKnown RBP eCLIP11.69□□□□□ -0.54
CDH23-203ENST00000398788 GRIN2BQ13224 1484 aa11.69□□□□□ -0.54
CDH23-203ENST00000398788 TAF7LQ5H9L4 462 aa11.68□□□□□ -0.54
CDH23-203ENST00000398788 CCDC146Q8IYE0 955 aa11.68□□□□□ -0.54
CDH23-203ENST00000398788 KCNJ4P48050 445 aa11.68□□□□□ -0.54
CDH23-203ENST00000398788 PRXQ9BXM0 1461 aa11.68□□□□□ -0.54
CDH23-203ENST00000398788 TRAK2O60296 914 aa11.67□□□□□ -0.54
CDH23-203ENST00000398788 TNNT3P45378 269 aaPredicted RBP11.67□□□□□ -0.54
CDH23-203ENST00000398788 PBRM1Q86U86 1689 aa11.67□□□□□ -0.54
CDH23-203ENST00000398788 ERICH3Q5RHP9 1530 aa11.67□□□□□ -0.54
CDH23-203ENST00000398788 HSP90AB1P08238 724 aaKnown RBP11.67□□□□□ -0.54
CDH23-203ENST00000398788 CASC1Q6TDU7 716 aa11.66□□□□□ -0.54
CDH23-203ENST00000398788 UQCRHLA0A096LP55 91 aa11.66□□□□□ -0.54
CDH23-203ENST00000398788 UQCRHP07919 91 aa11.66□□□□□ -0.54
CDH23-203ENST00000398788 HSCBQ8IWL3 235 aa11.66□□□□□ -0.54
CDH23-203ENST00000398788 GRPEL1Q9HAV7 217 aa11.66□□□□□ -0.54
CDH23-203ENST00000398788 ROCK2O75116 1388 aaKnown RBP11.66□□□□□ -0.54
CDH23-203ENST00000398788 SNAPC4Q5SXM2 1469 aa11.66□□□□□ -0.54
CDH23-203ENST00000398788 EID1Q9Y6B2 187 aa11.65□□□□□ -0.54
CDH23-203ENST00000398788 KIF21BO75037 1637 aa11.65□□□□□ -0.54
CDH23-203ENST00000398788 ST20-MTHFSA0A0A6YYL1 179 aa11.65□□□□□ -0.54
CDH23-203ENST00000398788 NPHP1O15259 732 aa11.65□□□□□ -0.54
CDH23-203ENST00000398788 E9PSI1 815 aa11.64□□□□□ -0.55
CDH23-203ENST00000398788 CHMP4AQ9BY43 222 aa11.64□□□□□ -0.55
CDH23-203ENST00000398788 FOXD4L1Q9NU39 408 aa11.64□□□□□ -0.55
CDH23-203ENST00000398788 ZNF330Q9Y3S2 320 aaPredicted RBP11.64□□□□□ -0.55
CDH23-203ENST00000398788 TRAK1Q9UPV9 953 aa11.64□□□□□ -0.55
CDH23-203ENST00000398788 KTN1Q86UP2 1357 aaKnown RBP11.64□□□□□ -0.55
CDH23-203ENST00000398788 MTERF4Q7Z6M4 381 aaKnown RBP11.63□□□□□ -0.55
CDH23-203ENST00000398788 AEBP1Q8IUX7 1158 aa11.63□□□□□ -0.55
CDH23-203ENST00000398788 CBX1P83916 185 aa11.63□□□□□ -0.55
CDH23-203ENST00000398788 RRP7AQ9Y3A4 280 aaKnown RBP11.63□□□□□ -0.55
CDH23-203ENST00000398788 ZRSR1Q15695 479 aaKnown RBP11.62□□□□□ -0.55
CDH23-203ENST00000398788 GBP4Q96PP9 640 aa11.62□□□□□ -0.55
CDH23-203ENST00000398788 CUL7Q14999 1698 aa11.62□□□□□ -0.55
CDH23-203ENST00000398788 CENPQQ7L2Z9 268 aaPredicted RBP11.62□□□□□ -0.55
CDH23-203ENST00000398788 CGNQ9P2M7 1197 aaKnown RBP11.62□□□□□ -0.55
CDH23-203ENST00000398788 DDX11L8A8MPP1 907 aa11.62□□□□□ -0.55
CDH23-203ENST00000398788 RTF1Q92541 710 aaKnown RBP11.61□□□□□ -0.55
CDH23-203ENST00000398788 BCL2L13Q9BXK5 485 aa11.61□□□□□ -0.55
CDH23-203ENST00000398788 ELL2O00472 640 aaPredicted RBP11.61□□□□□ -0.55
CDH23-203ENST00000398788 ITPRIPQ8IWB1 547 aa11.61□□□□□ -0.55
CDH23-203ENST00000398788 ADAMTS12P58397 1594 aa11.6□□□□□ -0.55
CDH23-203ENST00000398788 HDGFL2Q7Z4V5 671 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms